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Decreased panicle N application alleviates the negative effects of shading on rice grain yield and grain quality
WEI Huan-he, GE Jia-lin, ZHANG Xu-bin, ZHU Wang, DENG Fei, REN Wan-jun, CHEN Ying-long, MENG Tian-yao, DAI Qi-gen
2023, 22 (7): 2041-2053.   DOI: 10.1016/j.jia.2022.08.045
Abstract282)      PDF in ScienceDirect      
Light deficiency is a growing abiotic stress in rice production. However, few studies focus on shading effects on grain yield and quality of rice in East China. It is also essential to investigate proper nitrogen (N) application strategies that can effectively alleviate the negative impacts of light deficiency on grain yield and quality in rice. A two-year field experiment was conducted to explore the effects of shading (non-shading and shading from heading to maturity) and panicle N application (NDP, decreased panicle N rate; NMP, medium panicle N rate; NIP, increased panicle N rate) treatments on rice yield- and quality-related characteristics. Compared with non-shading, shading resulted in a 9.5–14.8% yield loss (P<0.05), mainly due to lower filled-grain percentage and grain weight. NMP and NIP had higher (P<0.05) grain yield than NDP under non-shading, and no significant difference was observed in rice grain yield among NDP, NMP, and NIP under shading. Compared with NMP and NIP, NDP achieved less yield loss under shading because of the increased filled-grain percentage and grain weight. Shading reduced leaf photosynthetic rate after heading, as well as shoot biomass weight at maturity, shoot biomass accumulation from heading to maturity, and nonstructural carbohydrate (NSC) content in the stem at maturity (P<0.05). The harvest index and NSC remobilization reserve of NDP were increased under shading. Shading decreased (P<0.05) percentages of brown rice, milled rice, head rice, and amylose content while increasing (P<0.05) chalky rice percentage, chalky area, chalky degree, and grain protein. NMP demonstrated a better milling quality under non-shading, while NDP demonstrated under shading. NDP exhibited both lower chalky rice percentage, chalky area, and chalky degree under non-shading and shading, compared with NMP and NIP. NDP under shading decreased amylose content and breakdown but increased grain protein content and setback, contributing to similar overall palatability to nonshading. Our results suggested severe grain yield and quality penalty of rice when subjected to shading after heading. NDP improved NSC remobilization, harvest index, and sink-filling efficiency and alleviated yield loss under shading. Besides, NDP would maintain rice’s milling, appearance, and cooking and eating qualities under shading. Proper N management with a decreased panicle N rate could be adopted to mitigate the negative effects of shading on rice grain yield and quality.
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Effect of the L-D1 alleles on leaf morphology, canopy structure and photosynthetic productivity in upland cotton (Gossypium hirsutum L.)
JIANG Hui, GAO Ming-wei, CHEN Ying, ZHANG Chao, WANG Jia-bao, CHAI Qi-chao, WANG Yong-cui, ZHENG Jin-xiu, WANG Xiu-li, ZHAO Jun-sheng
2023, 22 (1): 108-119.   DOI: 10.1016/j.jia.2022.08.099
Abstract169)      PDF in ScienceDirect      

One of the most important objectives for breeders is to develop high-yield cultivars.  The increase in crop yield has met with bottlenecks after the first green revolution, and more recent efforts have been focusing on achieving high photosynthetic efficiency traits in order to enhance the yield.  Leaf shape is a significant agronomic trait of upland cotton that affects plant and canopy architecture, yield, and other production attributes.  The major leaf shape types, including normal, sub-okra, okra, and super-okra, with varying levels of lobe severity, are controlled by a multiple allelic series of the D-genome locus L-D1.  To analyze the effects of L-D1 alleles on leaf morphology, photosynthetic related traits and yield of cotton, two sets of near isogenic lines (NILs) with different alleles were constructed in Lumianyan 22 (LMY22) and Lumianyan 28 (LMY28) backgrounds.  The analysis of morphological parameters and the results of virus-induced gene silencing (VIGS) showed that the regulation of leaf shape by L-D1 alleles was similar to a gene-dosage effect.  Compared with the normal leaf, deeper lobes of the sub-okra leaf improved plant canopy structure by decreasing the leaf area index (LAI) and increasing the light transmittance rate (LTR), and the mid-range LAI of sub-okra leaf also guaranteed the accumulation of cotton biomass.  Although the chlorophyll content (SPAD) of sub-okra leaf was lower than those of the other two leaf shapes, the net photosynthetic rate (Pn) of sub-okra leaf was higher than those of okra leaf and normal leaf at most stages.  Thus, the improvements in canopy structure, as well as photosynthetic and physiological characteristics, contributed to optimizing the light environment, thereby increasing the total biomass and yield in the lines with a sub-okra leaf shape.  Our results suggest that the sub-okra leaf may have practical application in cultivating varieties, and could enhance sustainable and profitable cotton production.

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PbPH5, an H+ P-ATPase on the tonoplast, is related to malic acid accumulation in pear fruit
SONG Jun-xing, CHEN Ying-can, LU Zhao-hui, ZHAO Guang-ping, WANG Xiao-li, ZHAI Rui, WANG Zhi-gang, YANG Cheng-quan, XU Ling-fei
2022, 21 (6): 1645-1657.   DOI: 10.1016/S2095-3119(21)63790-5
Abstract203)      PDF in ScienceDirect      

Organic acids are one of the most important factors influencing fruit flavors. The predominant organic acid in most pear cultivars is malic acid, but the mechanism controlling its accumulation remains unclear. In this study, by comparing gene expression levels and organic acid content, we revealed that the expression of PbPH5, which encodes a P3A-ATPase, is highly correlated with malic acid accumulation in different pear species, with correlation coefficients of 0.932**, 0.656*, 0.900**, and 0.518* (*, P<0.05 or **, P<0.01) in Pyrus bretschneideri Rehd., P. communis Linn., P. pyrifolia Nakai., and P. ussuriensis Maxim., respectively. Moreover, the overexpression of PbPH5 in pear significantly increased the malic acid content. In contrast, silencing PbPH5 via RNA interference significantly decreased its transcript level and the pear fruit malic acid content. A subcellular localization analysis indicated that PbPH5 is located in the tonoplast. Additionally, a phylogenetic analysis proved that PbPH5 is a PH5 homolog gene that is clustered with Petunia hybrida, Malus domestica, and Citrus reticulata genes. Considered together, these findings suggest PbPH5 is a functionally conserved gene. Furthermore, the accumulation of malic acid in pear fruits is at least partly related to the changes in PbPH5 transcription levels.

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Calibration and validation of SiBcrop Model for simulating LAI and surface heat fluxes of winter wheat in the North China Plain
CHEN Ying, LIU Feng-shan, TAO Fu-lu, GE Quan-sheng, JIANG Min, WANG Meng, ZHAO Feng-hua
2020, 19 (9): 2206-2215.   DOI: 10.1016/S2095-3119(20)63178-1
Abstract127)      PDF in ScienceDirect      
The accurate representation of surface characteristic is an important process to simulate surface energy and water flux in land-atmosphere boundary layer.  Coupling crop growth model in land surface model is an important method to accurately express the surface characteristics and biophysical processes in farmland.  However, the previous work mainly focused on crops in single cropping system, less work was done in multiple cropping systems.  This article described how to modify the sub-model in the SiBcrop to realize the accuracy simulation of leaf area index (LAI), latent heat flux (LHF) and sensible heat flux (SHF) of winter wheat growing in double cropping system in the North China Plain (NCP).  The seeding date of winter wheat was firstly reset according to the actual growing environment in the NCP.  The phenophases, LAI and heat fluxes in 2004–2006 at Yucheng Station, Shandong Province, China were used to calibrate the model.  The validations of LHF and SHF were based on the measurements at Yucheng Station in 2007–2010 and at Guantao Station, Hebei Province, China in 2009–2010.  The results showed the significant accuracy of the calibrated model in simulating these variables, with which the R2, root mean square error (RMSE) and index of agreement (IOA) between simulated and observed variables were obviously improved than the original code.  The sensitivities of the above variables to seeding date were also displayed to further explain the simulation error of the SiBcrop Model.  Overall, the research results indicated the modified SiBcrop Model can be applied to simulate the growth and flux process of winter wheat growing in double cropping system in the NCP. 
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Higher leaf area through leaf width and lower leaf angle were the primary morphological traits for yield advantage of japonica/indica hybrids
WEI Huan-he, YANG Yu-lin, SHAO Xing-yu, SHI Tian-yi, MENG Tian-yao, LU Yu, TAO Yuan, LI Xin-yue, DING En-hao, CHEN Ying-long, DAI Qi-gen
2020, 19 (2): 483-494.   DOI: 10.1016/S2095-3119(19)62628-6
Abstract143)      PDF in ScienceDirect      
The yield potential of japonica/indica hybrids (JIH) has been achieved over 13.5 t ha–1 in large-scale rice fields, and some physiological traits for yield advantage of JIH over japonica inbred rice (JI) and indica hybrid rice (IH) were also identified.  To date, little attention has been paid to morphological traits for yield advantage of JIH over JI and IH.  For this reason, three JIH, three JI, and three IH were field-grown at East China (Ningbo, Zhejiang Province) in 2015 and 2016.  Compared with JI and IH, JIH had 14.3 and 20.8% higher grain yield, respectively, attributed to its more spikelets per panicle and relatively high percentage of filled grains.  The advantage in spikelets per panicle of JIH over JI and IH was shown in number of grains on the upper, middle, and lower branches.  Compared with JI and IH, JIH had higher leaf area through leaf width and lower leaf angle of upper three leaves, higher leaf area index and leaf area per tiller at heading and maturity stages, higher stem weight per tiller and K and Si concentrations of stem at maturity, higher dry matter weight in leaf, stem, and panicle at heading and maturity stages, and higher biomass accumulation after heading and lower biomass translocation from stem during ripening.  Leaf width of upper three leaves were correlated positively, while leaf angle of upper three leaves were correlated negatively with biomass accumulation after heading, stem weight per tiller, and per unit length.  Our results indicated that the grain yield advantage of JIH was ascribed mainly to the more spikelets per panicle and relatively high percentage of filled grains.  Higher leaf area through leaf width and more erect leaves were associated with improved biomass accumulation and stem weighing during ripening, and were the primary morphological traits underlying higher grain yield of JIH.
 
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Morpho-physiological traits contributing to better yield performance of japonica/indica hybrids over indica hybrids under input-reduced practices
WEI Huan-he, MENG Tian-yao, GE Jia-lin, ZHANG Xu-bin, LU Yu, LI Xin-yue, TAO Yuan, DING En-hao, CHEN Ying-long, DAI Qi-gen
2020, 19 (11): 2643-2655.   DOI: 10.1016/S2095-3119(20)63251-8
Abstract122)      PDF in ScienceDirect      
It is widely reported that japonica/indica hybrids (JIH) have superior grain yield over other main varietal groups such as indica hybrids (IH) under sufficient resource inputs.  To date, little attention has been paid to yield performance of JIH under input-reduced practices, and whether JIH could have better grain yield performance over IH under input-reduced practices.  In this study, three JIH varieties and three IH varieties were compared in grain yield and their related morpho-physiological traits under two cultivation modes, i.e., conventional high-yielding method (CHYM) and double reductions in nitrogen rate and planting density (DRNP).  Our results showed that JIH had 8.3 and 13.3% higher grain yield over IH under CHYM and DRNP, respectively.  The superior grain yield of JIH over IH under DRNP was mainly attributed to larger sink size and improved sink filling efficiency.  Three main morpho-physiological traits were concluded for better yield performance of JIH over IH under DRNP.  Firstly, JIH had the reduced unproductive tillers growth, indicated by a higher percentage of productive tillers and the percentage of effective leaf area index (LAI) to total LAI at heading stage.  Secondly, a synergistic increase in biomass accumulation and harvest index were achieved of JIH, supported by higher biomass accumulation and leaf area duration during the main growth periods, and improved non-structural carbohydrate (NSC) remobilization after heading.  Thirdly, JIH had an improved canopy structure, showing as higher leaf area of upper three leaves and lower light extinction coefficient.  Our results suggested that improved morpho-physiological traits of JIH could lead to better grain yield performance over IH under input-reduced practices.
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Soil temperature estimation at different depths, using remotely-sensed data
HUANG Ran, HUANG Jian-xi, ZHANG Chao, MA Hong-yuan, ZHUO Wen, CHEN Ying-yi, ZHU De-hai, Qingling WU, Lamin R. MANSARAY
2020, 19 (1): 277-290.   DOI: 10.1016/S2095-3119(19)62657-2
Abstract110)      PDF in ScienceDirect      
Soil temperatures at different depths down the soil profile are important agro-meteorological indicators which are necessary for ecological modeling and precision agricultural activities.  In this paper, using time series of soil temperature (ST) measured at different depths (0, 5, 10, 20, and 40 cm) at agro-meteorological stations in northern China as reference data, ST was estimated from land surface temperature (LST) and normalized difference vegetation index (NDVI) derived from AQUA/TERRA MODIS data, and solar declination (Ds) in univariate and multivariate linear regression models.  Results showed that when daytime LST is used as predictor, the coefficient of determination (R2) values decrease from the 0 cm layer to the 40 cm layer.  Additionally, with the use of nighttime LST as predictor, the R2 values were relatively higher at 5, 10 and 15 cm depths than those at 0, 20 and 40 cm depths.  It is further observed that the multiple linear regression models for soil temperature estimation outperform the univariate linear regression models based on the root mean squared errors (RMSEs) and R2.  These results have demonstrated the potential of MODIS data in tandem with the Ds parameter for soil temperature estimation at the upper layers of the soil profile where plant roots grow in.  To the best of our knowledge, this is the first attempt at the synergistic use of
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Two new lncRNAs regulate the key immune factor NOD1 and TRAF5 in chicken lymphocyte  
BI Yu-lin, YUAN Xiao-ya, CHEN Ying, CHANG Guo-bin, CHEN Guo-hong
2019, 18 (11): 2589-2597.   DOI: 10.1016/S2095-3119(19)62722-X
Abstract126)      PDF in ScienceDirect      
Reticuloendotheliosis virus (REV) causes the atrophy of immune organs and immuno-suppression in chickens, but the underlying molecular mechanism of the immune response after infection by REV is not well understood.  Presently, the RNA-seq was used to analyze the regulation of immune response to REV in chicken lymphocytes from peripheral blood.  Overall, 134 differentially expressed long non-coding RNAs (lncRNAs) between cells with REV infection or without  in vitro were screened.  Based on the differentially expressed protein-coding genes, the nucleotide-binding oligomerization domain (NOD)-like receptor pathway related to immune regulation was enriched.  Two lncRNAs (L11530 and L09863) were predicted to target the NOD1 and tumor necrosis factor receptor-associated factor 5 (TRAF5) gene, respectively, which are involved in the NOD-like receptor pathway with cis-regulation way.  The in vitro results revealed the significantly up-regulated (P<0.01) levels of lncRNA-L11530 and its target gene, NOD1, and the significantly down-regulated (P<0.05) levels of lncRNA-L09863 and its target gene, TRAF5, in lymphocytes after REV infection.  These changes also occurred in vivo in blood lymphocytes of chickens infected with REV.  Further, L09863 and L11530 were respectively interfered, the expression levels of their target genes NOD1 or TRAF5 were significantly down-regulated, accompanied by the change of IL-8 and IL-18 secretions in lymphocytes.  The NOD-like receptor pathway appears to be important in the immune response to REV, LncRNA-11530 and lncRNA-09863 might involve in the immune regulation on REV infection by targeting NOD1 or TRAF5 in blood lymphocytes of chickens.  Our findings reveal a new regulation of lncRNAs (L11530 and L09863) on immunity in chicken peripheral blood lymphocytes for REV infection by changing the expression of the target genes via the NOD-like receptor pathway. 
 
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More stressful event does not always depress subsequent life performance
CHEN Ying-ying, ZHANG Wei, MA Gang, MA Chun-sen
2019, 18 (10): 2321-2329.   DOI: 10.1016/S2095-3119(18)62145-8
Abstract110)      PDF in ScienceDirect      
Climate change has led to a substantial increase in intensity and duration of heat waves worldwide.  Predicting the ecological impacts of hot events should incorporate both immediate and potential carry-over effects in different intensities of heat waves.  Previous studies suggested that higher heat dose in early life stage of insect generally decreased immediate survival and depressed adult reproduction through carry-over effects, or unchanged adult performance through recovery effects.  However, our previous study showed a different pattern, in which longer heat exposures in larval stage did not always decrease but sometimes increase the subsequent adult maturation success in the diamondback moth.  We speculated that it might be another important pattern in the carry-over effects vs. heat dose, and conducted experiments using a global pest, Plutella xylostella.  Our present results suggested that heat exposures in early life stage reduced the immediate survival and produced general declines with significant zigzag fluctuating patterns in subsequent body size and reproduction as exposure durations increased.  The similar patterns were also validated in other insect taxa and other stresses by reanalyzing the experiment data from literatures.  The finding highlights the importance for differentiating the biological effects and consequences of changes in heat dose at fine scales; daily exposure hours of a hot day should be considered to predict population dynamic under climate change.
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Safety Evaluation of Diacylglycerol Microemulsion in Rats/Mice
HUANG Tao, CHEN Ying, SHOU Tian-xing, YANG Jing, LI Duo
2011, 10 (7): 1117-1124.   DOI: 10.1016/S1671-2927(11)60101-6
Abstract1473)      PDF in ScienceDirect      
The objective of the present study was to evaluate potential adverse effects of diacylglycerol microemulsion (DAGM) inrats/mice. Acute safety evaluation was carried out by giving intragastrically with 20 mL 25% DAG kg-1 body weight ofDAGM or water with two groups of mice. Chronic safety evaluation with 40 male and 40 female Sprague-Dawley rats wascarried out by setting a control group and 3 different dose groups (n=10 male+10 female) administered with DAGM with6.7, 10 and 20 mL kg-1 body weight per day. Relevant parameters of liver and kidney function and biochemistry weredetermined by standard methods at end point. Acute toxicity study revealed the maximum tolerated dose (MTD) ofDAGM was 20 mL kg-1 body weight in mice. No death was observed at the dose of 20 mL kg-1 body weight per day. Chronicsafety evaluation did not show significant changes on hematological, histopathologic, clinical, and biochemical testswhen administered at levels of 6.7, 10 and 20 mL kg-1 body weight per day to rats for 30 d. No significant body weightchanges were observed in different dosages in both male and female rats. Our results suggested that acute and chronicadverse effects were not observed in histology and clinical parameters in both mice and rats. The results suggested thatDAGM is safe at the experimental levels.
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