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Fine-mapping of a candidate gene for web blotch resistance in Arachis hypogaea L.

Xiaohui Wu, Mengyuan Zhang, Zheng Zheng, Ziqi Sun, Feiyan Qi, Hua Liu, Juan Wang, Mengmeng Wang, Ruifang Zhao, Yue Wu, Xiao Wang, Hongfei Liu, Wenzhao Dong, Xinyou Zhang
2024, 23 (5): 1494-1506.   DOI: 10.1016/j.jia.2023.10.036
Abstract113)      PDF in ScienceDirect      
Peanut (Arachis hypogaea L.) is a globally important oil crop.  Web blotch is one of the most important foliar diseases affecting peanut, which results in serious yield losses worldwide.  Breeding web blotch-resistant peanut varieties is the most effective and economically viable method for minimizing yield losses due to web blotch.  In the current study, a bulked segregant analysis with next-generation sequencing was used to analyze an F2:3 segregating population and identify candidate loci related to web blotch resistance.  Based on the fine-mapping of the candidate genomic interval using kompetitive allele-specific PCR (KASP) markers, we identified a novel web blotch resistance-related locus spanning approximately 169 kb on chromosome 16.  This region included four annotated genes, of which only Arahy.35VVQ3 had a non-synonymous single nucleotide polymorphism in the coding region between the two parents.  Two markers (Chr.16.12872635 and Chr.16.12966357) linked to this gene were shown to be co-segregated with the resistance of peanut web blotch by 72 randomly selected recombinant inbred lines (RIL), which could be used in marker-assisted breeding of resistant peanut varieties.
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Development and characterization of new allohexaploid resistant to web blotch in peanut
WANG Si-yu, LI Li-na, FU Liu-yang, LIU Hua, QIN Li, CUI Cai-hong, MIAO Li-juan, ZHANG Zhong-xin, GAO Wei, DONG Wen-zhao, HUANG Bing-yan, ZHENG Zheng, TANG Feng-shou, ZHANG Xin-you, DU Pei
2021, 20 (1): 55-64.   DOI: 10.1016/S2095-3119(20)63228-2
Abstract101)      PDF in ScienceDirect      
Peanut diseases seriously threaten peanut production, creating disease-resistant materials via interspecific hybridization is an effective way to deal with this problem.  In this study, the embryo of an interspecific F1 hybrid was obtained by crossing the Silihong (Slh) cultivar with Arachis duranensis (ZW55), a diploid wild species.  Seedlings were generated by embryo rescue and tissue culture.  A true interspecific hybrid was then confirmed by cytological methods and molecular markers.  After treating seedlings with colchicine during in vitro multiplication, the established interspecific F1 hybrid produced seeds which were named as Am1210.  With oligonucleotide fluorescence in situ hybridization (Oligo FISH), molecular marker evaluations, morphological and web blotch resistance characterization, we found that: 1) Am1210 was an allohexaploid between Slh and ZW55; 2) the traits of spreading lateral branches, single-seeded or double-seeded pods and red seed coats were observed to be dominant compared to the erect type, multiple-seeded pods and brown seed coats; 3) the web blotch resistance of Am1210 was significantly improved than that of Slh, indicating the contribution of the web blotch resistance from the wild parent A. duranensis.  In addition, 69 dominant and co-dominant molecular markers were developed which could be both used to verify the hybrid in this study and to identify translocation or introgression lines with A. duranensis chromosome fragments in future studies as well.
 
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Genome-wide characterization and expression analysis of the cultivated peanut AhPR10 gene family mediating resistance to Aspergillus flavus L.
Qi Zhao, Mengjie Cui, Tengda Guo, Lei Shi, Feiyan Qi, Ziqi Sun, Pei Du, Hua Liu, Yu Zhang, Zheng Zheng, Bingyan Huang, Wenzhao Dong, Suoyi Han, Xinyou Zhang
DOI: 10.1016/j.jia.2024.07.006 Online: 08 July 2024
Abstract31)      PDF in ScienceDirect      
The pathogenesis-related protein PR10 is essential for plant growth, development, and stress responses.  In this study, PR10 genes in cultivated peanut (Arachis hypogaea L.) were systematically identified, after which their phylogenetic relationships, conserved motifs, gene structures, and syntenic relationships were analyzed.  A total of 54 AhPR10 genes were identified.  They were then divided into eight groups according to their phylogenetic relationships, which were supported by the characterization of gene structures and conserved motifs.  Analyses of chromosomal distribution and synteny revealed that segmental duplications were critical for the expansion of the AhPR10 gene family.  In addition, the identified AhPR10 genes had constitutive and inducible expression patterns.  Notably, AhPR10-7AhPR10-33, and AhPR10-41 may have crucial functions affecting the resistance of peanut to Aflavus.  In vitro fungistatic experiments indicated that recombinant AhPR10-33 can effectively inhibit Aflavus mycelial growth.  The study results provide useful insights for future research on AhPR10 functions that protect peanut from the detrimental effects of Aflavus.


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