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Metabolic profiles and morphological characteristics of leaf tips among different sweet potato (Ipomoea batatas Lam.) varieties

Wenqing Tan, Xinbo Guo, Zhangying Wang, Rong Zhang, Chaochen Tang, Bingzhi Jiang, Ruixue Jia, Yuanyuan Deng, Shaohai Yang, Jingyi Chen
2024, 23 (2): 494-510.   DOI: 10.1016/j.jia.2023.04.029
Abstract182)      PDF in ScienceDirect      

Sweet potato leaf tips have high nutritional value, and exploring the differences in the metabolic profiles of leaf tips among different sweet potato varieties can provide information to improve their qualities.  In this study, a UPLC-Q-Exactive Orbitrap/MS-based untargeted metabolomics method was used to evaluate the metabolites in leaf tips of 32 sweet potato varieties.  Three varieties with distinct overall metabolic profiles (A01, A02, and A03), two varieties with distinct profiles of phenolic acids (A20 and A18), and three varieties with distinct profiles of flavonoids (A05, A12, and A16) were identified.  In addition, a total of 163 and 29 differentially expressed metabolites correlated with the color and leaf shape of sweet potato leaf tips, respectively, were identified through morphological characterization.  Group comparison analysis of the phenotypic traits and a metabolite-phenotypic trait correlation analysis indicated that the color differences of sweet potato leaf tips were markedly associated with flavonoids.  Also, the level of polyphenols was correlated with the leaf shape of sweet potato leaf tips, with lobed leaf types having higher levels of polyphenols than the entire leaf types.  The findings on the metabolic profiles and differentially expressed metabolites associated with the morphology of sweet potato leaf tips can provide useful information for breeding sweet potato varieties with higher nutritional value.

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Autophagy-related protein PlAtg3 participates in vegetative growth, sporangial cleavage, autophagy and pathogenicity of Peronophythora litchii
Chengdong Yang, Manfei Luo, Xue Zhang, Linlin Ye, Ge Yu, Yi Lü, Yi Chen, Taixu Chen, Xuejian Wang, Wanzhen Feng, Qinghe Chen
2024, 23 (11): 3788-3800.   DOI: 10.1016/j.jia.2024.01.009
Abstract138)      PDF in ScienceDirect      
Litchi downy blight, caused by the plant pathogenic oomycete Peronophythora litchii, is one of the most devastating diseases on litchi and resulted in huge economic losses.  Autophagy plays an essential role in the development and pathogenicity of the filamentous fungi.  However, the function of autophagy in oomycetes remain elusive.  Here, an autophagy-related protein Atg3 homolog PlAtg3 was identified and characterized in Plitchii.  The absence of PlATG3 through the CRISPR/Cas9 gene replacement strategy compromised vegetative growth and sexual/asexual development.  Cytological analyses revealed that the deletion of PlATG3 impaired autophagosome formation with monodansylcadaverine (MDC) staining and significantly disrupted zoospore release due to defects of sporangial cleavage with FM4-64 staining.  Atg8 is considered to be an autophagy marker protein in various species.  Western blot analysis indicated that PlAtg3 is involved in degradation of PlAtg8-PE.  Interestingly, PlAtg3 was unable to interact with PlAtg8 in yeast two hybrid (Y2H) assays, possibly due to the absence of the Atg8 family interacting motif (AIM) in PlAtg3.  Furthermore, pathogenicity assays revealed that the deletion of PlATG3 considerably reduced the virulence of Plitchii.  Taken together, our data reveal that PlAtg3 plays an important role in radial growth, asexual/sexual development, sporangial cleavage and zoospore release, autophagosome formation, and pathogenicity in Plitchii.  This study contributes to a better understanding of the pathogenicity mechanisms of Plitchii and provides insights for the development of more effective strategies to control oomycete diseases.


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SiDWARF4 encodes an ent-copalyl diphosphate synthase (CPS) required for gibberellin biosynthesis and morphogenesis in foxtail millet
Yongchao Li, Mengmeng Sun, Rui Zhao, Jiayi Chen, Yunhao Chen, Shuqi Dong, Xiangyang Yuan, Xiaorui Li, Lulu Gao, Guanghui Yang, Peiyong Xin, Shujing Cheng, Jinfang Chu, Xiaoqian Chu, Jia-Gang Wang
DOI: 10.1016/j.jia.2024.12.002 Online: 05 December 2024
Abstract7)      PDF in ScienceDirect      
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