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Molecular diagnosis and direct quantification of cereal cyst nematode (
Heterodera
filipjevi
) from field soil using TaqMan real-time PCR
JIAN Jin-zhuo, HUANG Wen-kun, KONG Ling-an, JIAN Heng, Sulaiman ABDULSALAM, PENG De-liang, PENG Huan
2023, 22 (
8
): 2591-2601. DOI:
10.1016/j.jia.2022.09.016
Abstract
(
221
)
PDF in ScienceDirect
Heterodera filipjevi
continues to be a major threat to wheat production worldwide. Rapid detection and quantification of cyst nematodes are essential for more effective control against this nematode disease. In the present study, a TaqManminor groove binder (TaqMan-MGB) probe-based fluorescence quantitative real-time PCR (qPCR) was successfully developed and used for quantifying
H. filipjevi
from DNA extracts of soil. The primers and probe designed from the obtained RAPD-SCAR marker fragments of
H. filipjevi
showed high specificity to
H. filipjevi
using DNA from isolatesconfirmed species of 23 Heterodera spp., 1 Globodera spp. and 3 Pratylenchus spp. The qPCR assay is highly sensitive and provides improved
H. filipjevi
detection sensitivity of as low as 4
–3
single second-stage juvenile (J2) DNAs, 10
–3
female DNAs, and 0.01 μg μL
–1
genomic DNAs. A standard curve relating to the threshold cycle and log values of nematode numbers was generated and validated from artificially infested soils and was used to quantify
H. filipjevi
in naturally infested field soils. There was a high correlation between the
H. filipjevi
numbers estimated from 32 naturally infested field soils by both conventional methods and the numbers quantified using the qPCR assay. qPCR potentially provides a useful platform for the efficient detection and quantification of
H. filipjevi
directly from field soils and to quantify this species directly from DNA extracts of field soils
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Host status of
Brachypodium distachyon
to the cereal cyst nematode
CHEN Chang-long, LIU Shu-sen, LIU Qian, NIU Jun-hai, LIU Pei, ZHAO Jian-long, LIU Zhi-yong, LI Hong-jie, JIAN Heng
2018, 17 (
2
): 381-388. DOI:
10.1016/S2095-3119(17)61745-3
Abstract
(
726
)
PDF in ScienceDirect
Cereal cyst nematode (
Heterodera avenae
, CCN) distributes worldwide and has caused severe damage to cereal crops, and a model host will greatly aid in the study of this nematode. In this research, we assessed the sensitivity of 25 inbred lines of
Brachypodium distachyon
to
H. avenae
from Beijing, China. All lines of
B. distachyon
were infested by second-stage juveniles (J2s) of
H. avenae
from Daxing District of Beijing population, but only 13 inbred lines reproduced 0.2–3 cysts/plant, showing resistance. The entire root system of the infested
B. distachyon
appeared smaller and the fibrous roots were shorter and less numerous. We found that a dose of 1 000 J2s of
H. avenae
was sufficient for nematode infestation. We showed that Koz-1 of
B. distachyon
could reproduce more cysts than TR2A line. Line Koz-1 also supported the complete life cycles of 5 CCN geographical populations belonging to the Ha1 or Ha3 pathotype group. Our results suggest that
B. distachyon
is a host for CCN.
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Golden Promise barley (
Hordeum vulgare
) is a suitable candidate model host for investigation interaction with
Heterodera avenae
LUO Shu-jie, KONG Ling-an, PENG Huan, HUANG Wen-kun, CUI Jiang-kuan, LIU Jing, QIAO Fen, JIAN Heng, PENG De-liang
2017, 16 (
07
): 1537-1546. DOI:
10.1016/S2095-3119(16)61595-2
Abstract
(
1147
)
PDF in ScienceDirect
Heterodera avenae
(cereal cyst nematode, CCN) infects many cereal crops and causes serious yield losses worldwide. Interaction studies investigating
H. avenae
and its hosts are still in their infancy. In this study, a barley model plant, the
Hordeum vulgare
cultivar Golden Promise, was investigated for its potential as a candidate model host to study its interaction with
H. avenae
. CCN-infective juveniles were attracted by the root tips and gathered around the root elongation zones of Golden Promise on 0.7% water agar plates. The juveniles invaded the roots and developed successfully until maturation at 40 days after inoculation in sterile sand soil. The cryotomy and syncytium measurements indicated that the syncytia enlarged gradually throughout the development of the nematodes and caused the corresponding root regions to swell obviously. Quantitative real-time PCR analysis showed that the down-regulation of defence-related barley genes and up-regulation of development-related barley genes contribute to the understanding of compatible interaction between
H. avenae
and Golden Promise.
Barley stripe mosaic virus
(BSMV) virus-induced gene silencing (VIGS) can be used in the roots of Golden Promise. In conclusion, the Hordeum vulgare cultivar Golden Promise is a suitable candidate model host for interaction studies with Heterodera avenae. The studies presented above document the first CCN host that not only has published genome context but also be compatible to BSMV VIGS.
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Field evaluation of
Streptomyces rubrogriseus
HDZ-9-47 for biocontrol of
Meloidogyne incognita
on tomato
JIN Na, XUE Hui* LI Wen-jing, WANG Xue-yan, LIU Qian, LIU Shu-sen, LIU Pei, ZHAO Jian-long, JIAN Heng
2017, 16 (
06
): 1347-1357. DOI:
10.1016/S2095-3119(16)61553-8
Abstract
(
814
)
PDF in ScienceDirect
Streptomyces rubrogriseus
HDZ-9-47, isolated from eggs of
Meloidogyne
spp., was evaluated as a potential biocontrol agent of
Meloidogyne incognita
under
in vitro
and protective field. Microscopic observations showed that HDZ-9-47 parasitized eggs of
M
.
incognita
within 7 days.
In vitro
, the culture filtrate of HDZ-9-47 caused 97.0% mortality of second-stage juveniles (J2s) of
M
.
incognita
and inhibited more than 50% egg hatching. In the field, compared with the control, the root-knot index and J2s density in the treatment of drench the broth contained 10
12
HDZ-9-47 spores were respectively reduced by 51.1 and 80.7% at 90 days post transplantation, which were better than that in other application doses and methods. In addition, reduction rates of root-knot index and J2s density of the treatment of combined application of HDZ-9-47 with biofumigation was 87.1 and 91.0%, respectively, better than either of HDZ-9-47 or biofumigation used alone or fosthiazate treatment. And tomato yield also increased by 16.1%. Together, our results suggest that HDZ-9-47 could be an effective biocontrol agent of
M
.
incognita
, and that application of HDZ-9-47 combined with cabbage residue biofumigation was a promising and sustainable option for
M
.
incognita
control.
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