Journals
  Publication Years
  Keywords
Search within results Open Search
Please wait a minute...
For Selected: Toggle Thumbnails
Molecular mechanism of delayed development by interfering RNA targeting the phenylalanine ammonia lyase gene (pal1) in Pleurotus ostreatus
Qi He, Yuqing Jiang, Chenyang Huang, Lijiao Zhang, Ludan Hou, Fangjie Yao, Mengran Zhao
2025, 24 (4): 1477-1488.   DOI: 10.1016/j.jia.2024.06.002
Abstract52)      PDF in ScienceDirect      
Blocking the development of edible mushrooms will affect the production cycle and yield of fruiting bodies.  Phenylalanine ammonia lyase (PAL, EC 4.3.1.24.) is an enzyme that catalyzes the deamination of phenylalanine to form trans-cinnamic acid.  Previous studies have shown that a decrease in pal1 gene transcription delays fruiting body development in Pleurotus ostreatus.  Herein, we used wild type (WT) and RNA interference (RNAi) strains to study the molecular regulation of pal1 by RNA sequencing and Agrobacterium-mediated genetic transformation.  Our results showed that interference with the pal1 gene resulted in reductions in the total PAL enzyme activity and the total phenol content, as well as an increase in the intracellular H2O2 content.  RNA-Seq data demonstrated that the significantly enriched KEGG terms were mainly related to the peroxisome pathway, MAPK signaling pathway-yeast and three other pathways, and the catalase (CAT) gene cat1 is also involved in multiple pathways that were enriched above.  Exogenous H2O2 significantly enhanced the transcription of the cat1 gene and elevated total CAT enzymatic activity.  Moreover, the levels of cat1 gene transcription and the total CAT enzymatic activity in the RNAi-pal1 strains gradually become closer to those in the WT strain through the removal of H2O2, which indicated that pal1 regulated the expression of cat1 by affecting the intracellular H2O2 content.  Finally, the overexpression of the cat1 gene in P. ostreatus caused growth retardation, especially during the process of primordia formation.  In conclusion, this study demonstrated that PAL1 affects cat1 gene expression through the signaling molecule H2O2 and regulates the development of P. ostreatus.  The findings of this study enhance our understanding of the molecular developmental mechanism of edible mushrooms.


Reference | Related Articles | Metrics

Eureka lemon zinc finger protein ClDOF3.4 interacts with citrus yellow vein clearing virus coat protein to inhibit viral infection

Ping Liao, Ting Zeng, Mengyang Huangfu, Cairong Zheng, Jiequn Ren, Changyong Zhou, Yan Zhou
2024, 23 (6): 1979-1993.   DOI: 10.1016/j.jia.2024.03.049
Abstract81)      PDF in ScienceDirect      
Citrus yellow vein clearing virus (CYVCV) is a new citrus virus that has become an important factor restricting the development of China’s citrus industry, and the CYVCV coat protein (CP) is associated with viral pathogenicity.  In this study, the Eureka lemon zinc finger protein (ZFP) ClDOF3.4 was shown to interact with CYVCV CP in vivo and in vitro.  Transient expression of ClDOF3.4 in Eureka lemon induced the expression of salicylic acid (SA)-related and hypersensitive response marker genes, and triggered a reactive oxygen species burst, ion leakage necrosis, and the accumulation of free SA.  Furthermore, the CYVCV titer in ClDOF3.4 transgenic Eureka lemon plants was approximately 69.4% that in control plants 6 mon after inoculation, with only mild leaf chlorotic spots observed in those transgenic plants.  Taken together, the results indicate that ClDOF3.4 not only interacts with CP but also induces an immune response in Eureka lemon by inducing the SA pathways.  This is the first report that ZFP is involved in the immune response of a citrus viral disease, which provides a basis for further study of the molecular mechanism of CYVCV infection.
Reference | Related Articles | Metrics
Maizelegume intercropping promote N uptake through changing the root spatial distribution, legume nodulation capacity, and soil N availability
ZHENG Ben-chuan, ZHOU Ying, CHEN Ping, ZHANG Xiao-na, DU Qing, YANG Huan, WANG Xiao-chun, YANG Feng, XIAO Te, LI Long, YANG Wen-yu, YONG Tai-wen
2022, 21 (6): 1755-1771.   DOI: 10.1016/S2095-3119(21)63730-9
Abstract188)      PDF in ScienceDirect      
Legume cultivars affect N uptake, component crop growth, and soil physical and chemical characteristics in maize–legume intercropping systems.  However, how belowground interactions mediate root growth, N fixation, and nodulation of different legumes to affect N uptake is still unclear.  Hence, a two-year experiment was conducted with five planting patterns, i.e., maize–soybean strip intercropping (IMS), maize–peanut strip intercropping (IMP), and corresponding monocultures (monoculture maize (MM), monoculture soybean (MS), and monoculture peanut (MP)), and two N application rates, i.e., no N fertilizer (N–) and conventional N fertilizer (N+), to examine relationships between N uptake and root distribution of crops, legume nodulation and soil N availability.  Results showed that the averaged N uptake per unit area of intercrops was significantly lower than the corresponding monocultures.  Compared with the monoculture system, the N uptake of the intercropping systems increased by 31.7–45.4% in IMS and by 7.4–12.2% in IMP, respectively.  The N uptake per plant of intercropped maize and soybean significantly increased by 61.6 and 31.8%, and that of intercropped peanuts significantly decreased by 46.6% compared with the corresponding monocultures.  Maize and soybean showed asymmetrical distribution of roots in strip intercropping systems.  The root length density (RLD) and root surface area density (RSAD) of intercropped maize and soybean were significantly greater than that of the corresponding monocultures.  The roots of intercropped peanuts were confined, which resulted in decreased RLD and RSAD compared with the monoculture.  The nodule number and nodule fresh weight of soybean were significantly greater in IMS than in MS, and those of peanut were significantly lower in IMP than in MP.  The soil protease, urease, and nitrate reductase activities of maize and soybean were significantly greater in IMS and IMP than in the corresponding monoculture, while the enzyme activities of peanut were significantly lower in IMP than in MP.  The soil available N of maize and soybean was significantly greater increased in IMS and IMP than in the corresponding monocultures, while that of IMP was significantly lower than in MP.  In summary, the IMS system was more beneficial to N uptake than the IMP system.  The intercropping of maize and legumes can promote the N uptake of maize, thus reducing the need for N application and improving agricultural sustainability.

Reference | Related Articles | Metrics
Emergence of H5N1 highly pathogenic avian influenza in Democratic People’s Republic of Korea
LIU Li-ling, YANG Huan-liang, GUO Fu-sheng, WANG Xiu-rong, DENG Guo-hua, SHI Jian-zhong, TIAN Guo-bin, ZENG Xian-ying
2022, 21 (5): 1534-1538.   DOI: 10.1016/S2095-3119(21)63829-7
Abstract154)      PDF in ScienceDirect      
In the past decade, there has been extensive global surveillance for highly pathogenic avian influenza (HPAI) infection in both animals and humans, however, few studies on epidemiology of avian influenza in Democratic People’s Republic of Korea (DPRK) were published.  During the period 2013–2014, HPAI H5N1 viruses were detected with outbreaks in domestic poultry in DPRK.  Phylogenetic analysis revealed that the hemagglutinin gene of all samples belonged to clade 2.3.2.1c with high homology.  The HPAI H5N1 virus found in ducks at the Tudan Duck Farm in 2013 was might introduced by migratory birds and then led to the outbreaks on neighboring chicken farms in 2014.  These data provide direct evidence for the transmission of avian influenza viruses from wild birds to waterfowl to terrestrial birds.  Therefore, the monitoring and control of influenza virus in ducks must be given top priority, which are essential components to prevent and control HPAI.
Reference | Related Articles | Metrics
Genome-wide identification and expression analysis of GDSL esterase/lipase genes in tomato
SUN Yao-guang, HE Yu-qing, WANG He-xuan, JIANG Jing-bin, YANG Huan-huan, XU Xiang-yang
2022, 21 (2): 389-406.   DOI: 10.1016/S2095-3119(20)63461-X
Abstract480)      PDF in ScienceDirect      
The GDSL esterase/lipase family contains many functional genes that perform important biological functions in growth and development, morphogenesis, seed oil synthesis, and defense responses in plants.  The expression of GDSL esterase/lipase genes can respond to biotic and abiotic stresses.  Although GDSL esterase/lipase family genes have been identified and studied in other plants, they have not been identified and their functions remain unclear in tomato.  This study is the first to identify 80 GDSL esterase/lipase family genes in tomato, which were named SlGELP1–80.  These genes were mapped to their positions on the chromosomes and their physical and chemical properties, gene structure, phylogenetic relationships, collinear relationships, and cis-acting elements were analyzed.  The spatiotemporal expression characteristics of the SlGELP genes in tomato were diverse.  In addition, RNA-seq analysis indicated that the expression patterns of the SlGELP genes in tomato differed before and after inoculation with Stemphylium lycopersici.  qRT-PCR was used to analyze the expression of five SlGELP genes after treatments with S. lycopersici, salicylic acid and jasmonic acid.  Finally, this study was the first to identify and analyze GDSL esterase/lipase family genes in tomato via bioinformatics approaches, and these findings provide new insights for improving the study of plant disease resistance.
Reference | Related Articles | Metrics
Effects of post-silking water deficit on the leaf photosynthesis and senescence of waxy maize
YE Yu-xiu, WEN Zhang-rong, YANG Huan, LU Wei-ping, LU Da-lei
2020, 19 (9): 2216-2228.   DOI: 10.1016/S2095-3119(20)63158-6
Abstract152)      PDF in ScienceDirect      
Waxy maize is widely cultivated under rainfed conditions and frequently suffers water shortage during the late growth stage.  In this study, a pot trial was conducted to examine the effects of post-silking drought on leaf photosynthesis and senescence and its influence on grain yield.  Two waxy maize hybrids, Suyunuo 5 (SYN5) and Yunuo 7 (YN7), were grown under the control and drought (soil moisture content was 70–80% and 50–60%, respectively) conditions after silking in 2016 and 2017.  The decrease in yield was 11.1 and 15.4% for YN7 and SYN5, respectively, owing to the decreased grain weight and number.  Post-silking dry matter accumulation was reduced by 27.2% in YN7 and 26.3% in SYN5.  The contribution rate of pre-silking photoassimilates transferred to grain yield was increased by 15.6% in YN7 and 10.2% in SYN5, respectively.  Post-silking drought increased the malondialdehyde content, but decreased the contents of water, soluble protein, chlorophyll, and carotenoid in the leaves.  The weakened activities of enzymes involved in photosynthesis (ribulose-1,5-bisphosphate carboxylase and phosphoenolpyruvate carboxylase) and antioxidant system (catalase, superoxide dismutase and peroxidase) reduced the photosynthetic rate (Pn) and accelerated leaf senescence.  The correlation results indicated that reduced Pn and catalase activity and increased malondialdehyde content under drought conditions induced the decrease of post-silking photoassimilates deposition, ultimately resulted in the grain yield loss.
Reference | Related Articles | Metrics
Silencing the SLB3 transcription factor gene decreases drought stress tolerance in tomato
WANG Zi-yu, bAO Yu-fang, PEI Tong, WU Tai-ru, DU Xu, HE Meng-xi, WANG Yue, LIU Qi-feng, YANG Huan-huan, JIANG Jing-bin, ZHANG He, LI Jing-fu, ZHAO Ting-ting, XU Xiang-yang
2020, 19 (11): 2699-2708.   DOI: 10.1016/S2095-3119(20)63350-0
Abstract128)      PDF in ScienceDirect      
BRI1-EMS-SUPPRESSOR 1 (BES1) transcription factor is closely associated with the brassinosteroid (BR) signaling pathway and plays an important role in plant growth and development.  SLB3 is a member of BES1 transcription factor family and its expression was previously shown to increase significantly in tomato seedlings under drought stress.  In the present study,we used virus-induced gene silencing (VIGS) technology to downregulate SLB3 expression to reveal the function of the SLB3 gene under drought stress further.  The downregulated expression of SLB3 weakened the drought tolerance of the plants appeared earlier wilting and higher accumulation of H2O2 and O2·, decreased superoxide dismutase (SOD) activity, and increased proline (PRO) and malondialdehyde (MDA) contents and peroxidase (POD) activity.  Quantitative real-time PCR (qRT-PCR) analysis of BR-related genes revealed that the expression of SlCPD, SlDWARF and BIN2-related genes was significantly upregulated in SLB3-silenced seedlings under drought stress, but that the expression of TCH4-related genes was downregulated.  These results showed that silencing the SLB3 gene reduced the drought resistance of tomato plants and had an impact on the BR signaling transduction which may be probably responsible for the variation in drought resistance of the tomato plants. 
Reference | Related Articles | Metrics
Weakened carbon and nitrogen metabolisms under post-silking heat stress reduce the yield and dry matter accumulation in waxy maize
YANG Huan, GU Xiao-tian, DING Meng-qiu, LU Wei-ping, LU Da-lei
2020, 19 (1): 78-88.   DOI: 10.1016/S2095-3119(19)62622-5
Abstract187)      PDF in ScienceDirect      
Post-silking high temperature is one of the abiotic factors that affects waxy maize (Zea mays L. sinensis Kulesh) growth in southern China.  We conducted a pot trial in 2016–2017 to study the effects of post-silking daytime heat stress (35°C) on the activities of enzymes involved in leaf carbon and nitrogen metabolisms and leaf reactive oxygen species (ROS) and water contents.  This study could improve our understanding on dry matter accumulation and translocation and grain yield production.  Results indicated that decreased grain number and weight under heat stress led to yield loss, which decreased by 20.8 and 20.0% in 2016 and 2017, respectively.  High temperature reduced post-silking dry matter accumulation (16.1 and 29.5% in 2016 and 2017, respectively) and promoted translocation of pre-silking photoassimilates stored in vegetative organs, especially in leaf.  The lower leaf water content and chlorophyll SPAD value, and higher ROS (H2O2 and O2-·) content under heat stress conditions indicated accelerated senescent rate.  The weak activities of phosphoenolpyruvate carboxylase (PEPCase), Ribulose-1,5-bisphosphate carboxylase (RuBPCase), nitrate reductase (NR), and glutamine synthase (GS) indicated that leaf carbon and nitrogen metabolisms were suppressed when the plants suffered from a high temperature during grain filling.  Correlation analysis results indicated that the reduced grain yield was mainly caused by the decreased leaf water content, weakened NR activity, and increased H2O2 content.  The increased accumulation of grain weight and post-silking dry matter and the reduced translocation amount in leaf was mainly due to the increased chlorophyll SPAD value and NR activity.  Reduced PEPCase and RuBPCase activities did not affect dry matter accumulation and translocation and grain yield.  In conclusion, post-silking heat stress down-regulated the leaf NR and GS activities, increased the leaf water loss rate, increased ROS generation, and induced pre-silking carbohydrate translocation.  However, it reduced the post-silking direct photoassimilate deposition, ultimately, leading to grain yield loss.
Reference | Related Articles | Metrics
Downregulation of SL-ZH13 transcription factor gene expression decreases drought tolerance of tomato
ZHAO Ting-ting, WANG Zi-yu, BAO Yu-fang, ZHANG Xiao-chun, YANG Huan-huan, ZHANG Dong-ye, JIANG Jing-bin, ZHANG He, LI Jing-fu, CHEN Qing-shan, XU Xiang-yang
2019, 18 (7): 1579-1586.   DOI: 10.1016/S2095-3119(19)62621-3
Abstract293)      PDF in ScienceDirect      
Zinc finger-homeodomain proteins (ZF-HDs) are transcription factors that regulate plant growth, development, and abiotic stress tolerance.  The SL-ZH13 gene was found to be significantly upregulated under drought stress treatment in tomato (Solanum lycopersicum) leaves in our previous study.  In this study, to further understand the role that the SL-ZH13 gene plays in the response of tomato plants to drought stress, the virus-induced gene silencing (VIGS) method was applied to downregulate SL-ZH13 expression in tomato plants, and these plants were treated with drought stress to analyze the changes in drought tolerance.  The SL-ZH13 silencing efficiency was confirmed by quantitative real-time PCR (qRT-PCR) analysis.  In SL-ZH13-silenced plants, the stems wilted faster, leaf shrinkage was more severe than in control plants under the same drought stress treatment conditions, anyd the mean stem bending angle of SL-ZH13-silenced plants was smaller than that of control plants.  Physiological analyses showed that the activity of superoxide dismutase (SOD) and peroxidase (POD) and the content of proline (Pro) in SL-ZH13-silenced plants were lower than those in control plants after 1.5 and 3 h of drought stress treatment.  The malondialdehyde (MDA) content in SL-ZH13-silenced plants was higher than that in control plants after 1.5 and 3 h of drought stress treatment, and H2O2 and O2-· accumulated much more in the leaves of SL-ZH13-silenced plants than in the leaves of control plants.  These results suggested that silencing the SL-ZH13 gene affected the response of tomato plants to drought stress and decreased the drought tolerance of tomato plants. 
Reference | Related Articles | Metrics
Effects of high temperature during grain filling on physicochemical properties of waxy maize starch
LU Da-lei, YANG Huan, SHEN Xin, LU Wei-ping
2016, 15 (2): 309-316.   DOI: 10.1016/S2095-3119(15)61095-4
Abstract1838)      PDF in ScienceDirect      
Understanding the waxy maize starch physicochemical properties response to heat stress during grain filling could improve starch quality. The effects of heat stress during early (1–15 days after pollination, DAP) and late (16–30 DAP) grain filling stages on the starch physicochemical properties of four waxy maize varieties were evaluated. Crystallinity only increased in Suyunuo 5 after exposure to high temperature at late grain filling stage. The effects of heat stress on digestibility and swelling power were dependent on varieties and stages. Generally, swelling power was increased by heat stress at early grain development stage and digestibility was increased by high temperature at late grain filling stage, respectively. The results of correlation analysis indicated the starch with large granule size could swell well and easy digest. Peak, trough, final, and breakdown viscosities in response to heat stress were dependent on stages and varieties. In general, peak, trough and final viscosities were decreased and increased by heat stress at early grain formation and late grain filling stages, respectively; whereas the breakdown and setback viscosities were similar among the three treatments. Heat stress increased the gelatinization temperatures and retrogradation percentage. Gelatinization range decreased under heat stress at 1–15 DAP but remained constant under heat stress at 16–30 DAP in all varieties. The starch exposed to high temperature at 16–30 DAP presented higher digestibility and peak viscosity and lower retrogradation percentage than those at 1–15 DAP. Therefore, heat stress at early grain formation stage severely affects the physicochemical properties of starch.
Reference | Related Articles | Metrics