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Salinity-responsive key endophytic bacteria in the propagules of Kandelia obovata enhance salt tolerance in rice
Zhian Dai, Rongwei Yuan, Xiangxia Yang, Hanxiao Xi, Ma Zhuo, Mi Wei
2025, 24 (5): 1738-1753.   DOI: 10.1016/j.jia.2024.01.033
Abstract34)      PDF in ScienceDirect      
Salinity is a major environmental stress affecting crop growth and productivity globally.  The application of halo-tolerant plant growth-promoting bacteria (HT-PGPB) has been widely recognized to promote crop growth and reduce the adverse effects of salt stress.  In this study, key endophytic bacteria that can respond to salinity changes were identified by analyzing the microbial community in propagules of Kandelia obovata.  Delftia tsuruhatensis DYX29, a strain that can grow normally under high salinity conditions with a sodium chloride (NaCl) concentration of 5% (w/v), was obtained by pure culture.  DYX29 can produce siderophores with a siderophore unit value of 87.6% and 1-aminocyclopropane-1-carboxylate (ACC) deaminase with 29 U L–1, and its synthesis of intracellular amino acids and auxin can be induced by high salinity.  Inoculation with DYX29 can remarkably promote the salt tolerance of rice.  Under salt stress, the addition of DYX29 was shown to effectively promote the growth of rice seedlings through a variety of approaches.  It increased the biomass of rice seedlings by 32.9% (dry weight) and promoted the accumulation of soluble sugars by 23.1%.  It also increased catalase (CAT) and peroxidase (POD) activities in rice leaves by 37.8 and 88.2%, respectively.  Moreover, it maintained the ionic homeostasis in rice roots and leaves.  In addition, it upregulated the expression of growth-promoting hormones, such as indole-3-acetic acid (IAA), brassinolide (BL), abscisic acid (ABA), and salicylic acid (SA), in rice roots by 27.8, 69.5, 123.7 and 28.6%, respectively.  This study provides inspiration for screening valuable salt-tolerant pro-biotic bacteria from mangrove ecosystems and their use for crop growth promotion under salt stress.  It can also provide useful references for the development of new salt-tolerant and pro-biotic biofertilizers, as well as the investigation of the related mechanisms.


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Yak and Tibetan sheep mixed grazing enhances plant functional diversity in alpine grassland
Yuzhen Liu, Xinquan Zhao, Xiaoxia Yang, Wenting Liu, Bin Feng, Shengnan Sun, Quanmin Dong
2025, 24 (3): 936-948.   DOI: 10.1016/j.jia.2024.09.016
Abstract58)      PDF in ScienceDirect      

The response of plant functional diversity to external disturbances not only effectively predicts changes in the ecosystem but it also reflects how plant communities use external environmental resources.  However, research on how different herbivore assemblages affect plant functional diversity is limited.  Therefore, this study systematically explored the effects of three typical herbivore assemblages (yak grazing, Tibetan sheep grazing, and mixed grazing by yaks and Tibetan sheep) on species richness, plant functional diversity, and soil physicochemical properties in alpine grasslands on the Qinghai-Tibet Plateau, China.  This study further investigated the primary mechanisms driving the changes in plant functional diversity.  The results indicate four key aspects of this system: (1) Grazing significantly enhanced plant functional diversity, particularly when the mixed grazing by yaks and Tibetan sheep was applied at a ratio of 1:2.  This ratio showed the most substantial improvement in the functional dispersion index and Rao’s quadratic entropy index.  (2) Compared to enclosed treatments, grazing increased species richness and β-diversity, contributing to higher plant functional diversity.  (3) Grazing treatments affected various plant traits, such as reducing plant community height and leaf thickness while increasing specific leaf area.  However, the impact on plant functional diversity was most pronounced under the mixed grazing by yaks and Tibetan sheep at a ratio of 1:2.  (4) Species α-diversity was positively correlated with plant functional diversity.  Changes in plant functional diversity were primarily regulated by variations in soil physicochemical properties.  Specifically, increases in soil available nitrogen significantly promoted changes in plant functional diversity, while increases in soil available potassium and bulk density had a significant inhibitory effect on these changes.  Long-term grazing significantly reduced the height of plant communities in alpine meadows, while a balanced mixture of yak and Tibetan sheep grazing, especially at a ratio of 1:2, enhanced plant functional diversity the most.  This suggests that, under these conditions, the use of external environmental resources by the plant community is optimized.

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Impact of a new pesticide on rhizosphere microbes and plant health: Case study of Y17991 against sharp eyespot in wheat
Xiangxia Yang, Tingting Chen, Libo Xiang, Limin Liu, Mi Wei
2025, 24 (2): 769-785.   DOI: 10.1016/j.jia.2024.08.022
Abstract60)      PDF in ScienceDirect      
Sharp eyespot (Rhizoctonia cerealis) is a widespread soil-borne fungal disease that poses a severe threat to wheat health, and it is one of the main obstacles to achieving stable and high-quality wheat yields in China.  Our collaborative team has developed a novel, efficient, and low-toxicity fungicide named Y17991 (N-(2-(2,4-bis-(trifluoromethyl)phenoxy)phenyl)-3-(difluoromethyl)-1-methyl-1H-pyrazole-4-carboxamide).  Preliminary laboratory tests confirmed the significant inhibitory effect of this agent on Rcerealis.  Large-area field trials also demonstrated its efficacy, with a disease prevention index of 83.52%, which is 1.97% greater than that of the widely used thifluzamide, and it significantly increased the wheat yield.  Moreover, this study explored the impacts of Y17991 on the structure and function of the microbial community in wheat rhizosphere soil.  Bacterial communities were more strongly affected than fungal communities.  Y17991 significantly modulated key amino acid metabolic pathways and certain biosynthetic processes in diseased wheat rhizospheres, and it also enhanced certain biosynthetic pathways and metabolic activities in healthy wheat rhizospheres.  Additionally, the application of Y17991 regulated rhizosphere metabolites, thus exerting significant control over the microbial community.  We identified 15 microbial strains potentially involved in the prevention and treatment of Rcerealis, and Y17991 treatment promoted the growth of Pedobacter and Bacillus strains.  These strains not only aid in plant growth but they also have the potential for disease prevention.  In summary, Y17991 application at a reasonable dose does not cause significant disruption to nontarget rhizosphere microbial communities.  In future studies, we will continue to investigate the impacts of Y17991 on nonmicrobial components in soil ecosystems, such as protozoa and nematodes.  Our research provides a theoretical basis for the scientific application and promotion of new fungicides and offers a significant reference for establishing a comprehensive system for assessing the ecological impact of pesticides on the environment.


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A unique role of the pyrimidine de novo synthesis enzyme ODCase in Lysobacter enzymogenes
Mingming Yang, Yunxiao Tan, Jiabing Ma, Yingjia Zhao, Xia Yan, Nana Wang, Pingping Wang, Jiaqi Tan, Suilong Ai, Xiaofei Liang, Bangshuai Chang, Obadah E. A. Yousif, Chao Zhao, Bo Wang, Guoliang Qian, Lili Huang
2024, 23 (9): 3066-3077.   DOI: 10.1016/j.jia.2023.11.047
Abstract98)      PDF in ScienceDirect      
Bacterial species of the genus Lysobacter are environmentally ubiquitous with strong antifungal biocontrol potential.  Heat-stable antifungal factor (HSAF) secreted by the biocontrol bacterium Lysobacter enzymogenes OH11 has broad-spectrum and highly efficient antifungal activity.  Studying the biosynthetic regulations of HSAF would lay an important foundation for strain engineering toward improved HSAF production.  In this work, we demonstrate that Le0752, an orotidine-5´-phosphate decarboxylase enzyme (ODCase) catalyzing a pivotal step of the UMP de novo biosynthesis pathway, is vital for HSAF-mediated antimicrobial activities and growth of Lenzymogenes OH11, but not for twitching motility.  This gene regulates the production of HSAF by affecting the expression of lafB, a key gene in the HSAF biosynthesis operon, through the transcription factor Clp.  Interestingly, bioinformatics analysis revealed that Le0752 belongs to the Group III ODCases, whereas its homologs in the closely related genera Xanthomonas and Stenotrophomonas belong to Group I, which contains most ODCases from Gram-positive bacteria, Gram-negative bacteria and cyanobacteria.  Moreover, the Group I ODCase PXO_3614 from the Xanthomonas oryzae pv.  oryzae PXO99A strain complemented the Le0752 mutant in regulating HSAF-mediated antagonistic activity.  Together, these results highlight the important requirement of de novo pyrimidine biosynthetic enzymes for antibiotic HSAF production in Lenzymogenes, which lays an important foundation for improving HSAF production via metabolic flow design and for dissecting the regulatory functions of bacterial ODCases.
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Baseline establishment, susceptibility monitoring and risk assessment of cyproflanilide, a novel meta-diamide insecticide, against Chilo suppressalis (Lepidoptera: Crambidae) in China
Wenchao Ge, Songtao Qiao, Chong Liu, Fangrui Guo, Shuai Wang, Hao Sun, Yan Liu, Fengxia Yang, Shunfan Wu, Congfen Gao
DOI: 10.1016/j.jia.2025.03.028 Online: 31 March 2025
Abstract11)      PDF in ScienceDirect      

The rice stem borer, Chilo suppressalis (Walker) (Lepidoptera: Crambidae), is one of the most serious pests in rice-growing areas, and it has developed resistance to most insecticides currently used in the field. Cyproflanilide is a novel meta-diamide insecticide that has shown high activities to multiple pests. Evaluating the risk of resistance to cyproflanilide in Csuppressalis is necessary for its preventive resistance management. Here we established the baseline susceptibility of Csuppressalis to cyproflanilide by the rice-seedling dipping method and topical application, and the LC50 and LD50 values were 0.026 mg L-1 and 0.122 ng/larva, respectively. The LC50 values of cyproflanilide in 37 field populations ranged from 0.012 to 0.061 mg L-1, and 25 field populations exhibited resistance to chlorantraniliprole with the highest LC50 value of 3770.059 mg L-1. In addition, a logistic distribution model analysis indicated that only 0.048 mg L-1 of cyproflanilide was required to kill 90% field chlorantraniliprole-resistant populations of Csuppressalis, compared to 2087.764 mg L-1 of chlorantraniliprole for a similar level of control. Resistance screening over 19 generations did not result in resistance to cyproflanilide (RR=3.1-fold). The realized heritability (h2) of resistance was estimated as 0.067 by using threshold trait analysis, suggesting a low risk of cyproflanilide resistance development in susceptible strains. The Cypro-SEL population (F10) had no obvious fitness cost (relative fitness=0.96), and no significant changes in sensitivity to seven tested insecticides. These findings suggested that cyproflanilide is a promising insecticide for the management of chlorantraniliprole-resistant Csuppressalis. Moreover, this integrated risk assessment provides scientific application guidelines for the sustainable resistance management of cyproflanilide for controlling Csuppressalis.

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