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Quantitative trait loci analysis for root traits in synthetic hexaploid wheat under drought stress conditions
LIU Rui-xuan, WU Fang-kun, YI Xin, LIN Yu, WANG Zhi-qiang, LIU Shi-hang, DENG Mei, MA Jian, WEI Yu-ming, ZHENG You-liang, LIU Ya-xi
2020, 19 (
8
): 1947-1960. DOI:
10.1016/S2095-3119(19)62825-X
Abstract
(
187
)
PDF in ScienceDirect
Synthetic hexaploid wheat (SHW), possesses numerous genes for drought that can help breeding for drought-tolerant wheat varieties. We evaluated 10 root traits at seedling stage in 111 F
9
recombinant inbred lines derived from a F
2
population of a SHW line (SHW-L1) and a common wheat line, under normal (NC) and polyethylene glycol-simulated drought stress conditions (DC). We mapped quantitative trait loci (QTLs) for root traits using an enriched high-density genetic map containing 120 370 single nucleotide polymorphisms (SNPs), 733 diversity arrays technology markers (DArT) and 119 simple sequence repeats (SSRs). With four replicates per treatment, we identified 19 QTLs for root traits under NC and DC, and 12 of them could be consistently detected with three or four replicates. Two novel QTLs for root fresh weight and root diameter under NC explained 9 and 15.7% of the phenotypic variation respectively, and six novel QTLs for root fresh weight, the ratio of root water loss, total root surface area, number of root tips, and number of root forks under DC explained 8.5–14% of the phenotypic variation. Here seven of eight novel QTLs could be consistently detected with more than three replicates. Results provide essential information for fine-mapping QTLs related to drought tolerance that will facilitate breeding drought-tolerant wheat cultivars.
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A major quantitative trait locus controlling phosphorus utilization efficiency under different phytate-P conditions at vegetative stage in barley
GAO Shang-qing, CHEN Guang-deng, HU De-yi, ZHANG Xi-zhou, LI Ting-xuan, LIU Shi-hang, LIU Chun-ji
2018, 17 (
2
): 285-295. DOI:
10.1016/S2095-3119(17)61713-1
Abstract
(
771
)
PDF in ScienceDirect
Organic phosphorus (P) is an important component of the soil P pool, and it has been proven to be a potential source of P for plants. The phosphorus utilization efficiency (PUE) and PUE related traits (tiller number (TN), shoot dry weight (DW), and root dry weight) under different phytate-P conditions (low phytate-P, 0.05 mmol L
–1
and normal phytate-P, 0.5 mmol L
–1
) were investigated using a population consisting of 128 recombinant inbred lines (RILs) at the vegetative stage in barley. The population was derived from a cross between a P-inefficient genotype (Baudin) and a P-efficient genotype (CN4027, a
Hordeum spontaneum
accession). A major locus (designated
Qpue.sau-3H
) conferring PUE was detected in shoots and roots from the RIL population. The quantitative trait locus (QTL) was mapped on chromosome 3H and the allele from CN4027 confers high PUE. This locus explained up to 30.3 and 28.4% of the phenotypic variance in shoots under low and normal phytate-P conditions, respectively. It also explains 28.3 and 30.7% of the phenotypic variation in root under the low and normal phytate-P conditions, respectively. Results from this study also showed that TN was not correlated with PUE, and a QTL controlling TN was detected on chromosome 5H. However, dry weight (DW) was significantly and positively correlated with PUE, and a QTL controlling DW was detected near the
Qpue.sau-3H
locus. Based on a covariance analysis, existing data indicated that, although DW may affect PUE, different genes at this locus are likely involved in controlling these two traits.
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