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Involvement of the autophagy-related gene BdATG8 in development and pathogenicity in Botryosphaeria dothidea
LIU Na, LIAN Sen, ZHOU Shan-yue, WANG Cai-xia, REN Wei-chao, LI Bao-hua
2022, 21 (8): 2319-2328.   DOI: 10.1016/S2095-3119(21)63863-7
Abstract222)      PDF in ScienceDirect      

Botryosphaeria dothidea is a destructive fungal pathogen that causes Botryosphaeria canker and fruit ring rot on apple worldwide.  Autophagy is a process of self-degradation that maintains intracellular homeostasis via lysosomal pathway.  To date, the biological role of autophagy in B. dothidea remains unknown.  In this study, we identified and characterized the autophagy-related gene BdATG8 in B. dothidea.  BdATG8 was able to restore the defect in nitrogen starvation tolerance of Saccharomyces cerevisiae ATG8 deletion mutant.  GFP-BdAtg8 was shown to be a useful marker for monitoring autophagy in B. dothidea.  Target deletion of BdATG8 (ΔBdAtg8) blocked autophagy and significantly impaired mycelial growth, conidiation and perithecium formation.  In addition, ΔBdAtg8 showed significantly increased sensitivity to phytoalexin and oxidative stress, suggesting that BdATG8 plays critical roles in overcoming phytoalexin and reactive oxygen species (ROS)-mediated plant immunity.  Pathogenicity assays revealed that ΔBdAtg8 almost lost ability to infect hosts.  Overall, our results indicate that BdATG8 plays an important role in fungal development, stress responses and pathogenesis in B. dothidea.

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Development and application of microsatellite markers within transcription factors in flare tree peony (Paeonia rockii) based on next-generation and single-molecule long-read RNA-seq
LIU Na, CHENG Fang-yun, GUO Xin, ZHONG Yuan
2021, 20 (7): 1832-1848.   DOI: 10.1016/S2095-3119(20)63402-5
Abstract129)      PDF in ScienceDirect      
Tree peonies native to China are a precious crop with ornamental, medicinal and edible oil properties, of which flare tree peony (Paeonia rockii) is one of the most significant germplasms in Paeonia.  The development and application of expressed sequence tag-simple sequence repeat (EST-SSR) markers are very valuable for genetic and breeding applications, but EST-SSR resources for the genus Paeonia are still limited.  In this study, we first reported the development of SSRs within transcription factors (TFs) in P. rockii based on next-generation sequencing (NGS) and single-molecule long-read sequencing (SMLRS).  A total of 166 EST-SSRs containing six nucleotide repeat types were identified from 959 candidate TFs associated with yield, with an average of one SSR per 5.83 unigenes.  In total, 102 (61.45%) pairs of primers produced amplification products in the two RNA-seq cultivars.  Among them, 58 (56.86%) pairs of primers from 18 gene families (AP2, bHLH, HSF, etc.) were identified to be polymorphic both in the parents of a linkage mapping population and in eight randomly selected accessions of P. rockii.  Further, the 58 EST-SSRs indicated a high level of informativeness with PIC values ranging from 0.32 to 0.91 (mean 0.70) after assessment in 37 tree peony accessions.  Transferability studies indicated that the amplification ratio of the 58 pairs of primers ranged from 89.66 to 100% across seven species of Paeonia.  In addition, a genetic relationship study was performed in 62 accessions.  Cluster analysis using the neighbour-joining (NJ) tree demonstrated that major clusters corresponded to the known pedigree trees.  Taken together, these newly developed EST-SSRs have a potential use in the conservation of tree peony germplasm and marker-assisted selection (MAS) breeding.
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Straw layer burial to alleviate salt stress in silty loam soils: Impacts of straw forms
ZHANG Hong-yuan, LU Chuang, PANG Huan-cheng, LIU Na, ZHANG Xiao-li, LI Yu-yi
2020, 19 (1): 265-276.   DOI: 10.1016/S2095-3119(19)62737-1
Abstract131)      PDF in ScienceDirect      
Salt stress can be alleviated by straw layer burial in the soil, but little is known of the appropriate form of the straw layer for optimal regulation of soil water and salinity because of the uncontrollability of field tests.  Here, the following four straw forms with compaction thickness of 5 cm buried 40–45 deep were studied: no straw layer (CK), segmented straw (SL, 5 cm in length), straw pellet (SK), and straw powder (SF).  The three straw forms (SL, SK and SF) significantly delayed the infiltration of irrigation water down the column profile by 71.20–134.3 h relative to CK and the migration velocity of the wetting front under SF was the slowest.  It took longer for the wetting front to transcend SK than SL but shorter for it to reach the bottom of soil column after water crossed the straw layer.  Compared with CK, the average volumetric water content in the 0–40 cm soil layer increased by 6.45% under SL, 1.77% under SK and 5.39% under SF.  The desalination rates at the 0–40 and 0–100 cm soil layers increased by 5.85 and 3.76% under SL, 6.64 and 1.47% under SK and 5.97 and 4.82% under SF.  However, there was no significant difference among straw forms in the 0–40 cm soil layer.  Furthermore, the salt leaching efficiency (SLE, g mm–1 h–1) above the 40 cm layer under SL was 0.0097, being significantly higher than that under SF (0.0071) by 37.23%.  Salt storage under SL, SK and SF in the 40–45 cm layer accounted for 4.50, 16.92 and 7.43% of total storage in the 1-m column profile.  Cumulative evaporation under SL and SF decreased significantly by 41.20 and 49.00%, with both treatments having the most significant inhibition of salt accumulation (resalinization rate being 36.06 and 47.15% lower than CK) in the 0–40 cm soil layer.  In conclusion, the different forms of straw layers have desalting effects under high irrigation level (446 mm).  In particular, SL and SF performed better than SK in promoting deep salt leaching and inhibiting salt accumulation on the soil surface.  However, SL was simpler to implement and its SLE was higher.  Therefore, the segmented 5 cm straw can be recommended as an optimum physical form for establishing a straw layer for managing saline soils for crop production.
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A larval specific OBP able to bind the major female sex pheromone component in Spodoptera exigua (Hübner)
JIN Rong, LIU Nai-yong, LIU Yan, DONG Shuang-lin
2015, 14 (7): 1356-1366.   DOI: 10.1016/S2095-3119(14)60849-2
Abstract2086)      PDF in ScienceDirect      
Odorant binding proteins (OBPs) in insects are postulated to solubilize and transport the hydrophobic odorants across the hydrophilic antennal lymph to the olfactory receptors (ORs) located on the dendrite membrane of the sensory neurons. OBPs in adult insects have been intensively reported, but those in larvae are rarely addressed. In our study, a full-length OBP cDNA, namely SexiOBP13, was cloned by RT-PCR and RACE strategy from the heads of Spodoptera exigua larvae. The quantitative real-time PCR (qPCR) measurement indicated that SexiOBP13 was highly expressed in larval head, but very low in other parts of larva and was not detected in any tissues of adult. The binding affinities of SexiOBP13 to plant volatiles and female sex pheromone components were measured by competitive binding assays. Interestingly, SexiOBP13 displayed a high binding affinity (Ki=3.82 μmol L–1) to Z9,E12–14:Ac, the major sex pheromone component of S. exigua, while low affinities to the tested host plant volatiles (Ki>27 μmol L–1). The behavioral tests further confirmed that Z9,E12–14:Ac was indeed active to elicit the behavioral activity of the third instar larvae of S. exigua. Taken together, our results suggest that SexiOBP13 may play a role in reception of female sex pheromone in S. exigua larvae. The ecological significance of the larvae preference to the adult female sex pheromone was discussed.
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Actin and Myosin Co-Localize in Plasmodesmata and Ectodesmata-Like Structure
DONG Yu, LIU Na, LIU Gang, LI Wen-long, YAN Ai-hua and WANG Dong-mei
2011, 10 (6): 845-849.   DOI: 10.1016/S1671-2927(11)60070-9
Abstract3041)      PDF in ScienceDirect      
Actin and myosin were found to be associated with the cytoplasmic sleeve of plasmodesmata. As cytoskeletal proteins, actin and myosin are believed to regulate the conductivity of plasmodesmata (PDs) in higher plants. Using immunocytochemical methods, we found the two proteins to be co-localized - and closely linked to each other - in plasmodesmata and ectodesmata-like structure in ageing parenchymatous cells of Allium sativum L. We suggest that intercellular communication is affected by the interaction between actin and myosin.
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