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OsPPR9 encodes a DYW-type PPR protein that affects editing efficiency of multiple RNA editing sites and is essential for chloroplast development
CHEN Chang-zhao, WANG Ya-Liang, HE Meng-xing, LI Zhi-wen, SHEN Lan, LI Qing, RE De-yong, HU Jiang, ZHU Li, ZHANG Guang-heng, GAO Zhen-yu, ZENG Da-li, GUO Long-biao, QIAN Qian, ZHANG Qiang
2023, 22 (4): 972-980.   DOI: 10.1016/j.jia.2022.08.026
Abstract333)      PDF in ScienceDirect      

Photosynthesis occurs mainly in chloroplasts, whose development is regulated by proteins encoded by nuclear genes.  Among them, pentapeptide repeat (PPR) proteins participate in organelle RNA editing.  Although there are more than 450 members of the PPR protein family in rice, only a few affect RNA editing in rice chloroplasts.  Gene editing technology has created new rice germplasm and mutants, which could be used for rice breeding and gene function study.  This study evaluated the functions of OsPPR9 in chloroplast RNA editing in rice.  The osppr9 mutants were obtained by CRISPR/Cas9, which showed yellowing leaves and a lethal phenotype, with suppressed expression of genes associated with chloroplast development and accumulation of photosynthetic-related proteins.  In addition, loss of OsPPR9 protein function reduces the editing efficiency of rps8-C182, rpoC2-C4106, rps14-C80, and ndhB-C611 RNA editing sites, which affects chloroplast growth and development in rice.  Our data showed that OsPPR9 is highly expressed in rice leaves and encodes a DYW-PPR protein localized in chloroplasts.  Besides, the OsPPR9 protein was shown to interact with OsMORF2 and OsMORF9.  Together, our findings provide insights into the role of the PPR protein in regulating chloroplast development in rice. 

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Interactions between phosphorus availability and microbes in a wheat–maize double cropping system: a reduced fertilization scheme
YU Xiao-jing, CHEN Qi, SHI Wen-cong, GAO Zheng, SUN Xiao, DONG Jing-jing, LI Juan, WANG Heng-tao, GAO Jian-guo, LIU Zhi-guang, ZHANG Min
2022, 21 (3): 840-854.   DOI: 10.1016/S2095-3119(20)63599-7
Abstract197)      PDF in ScienceDirect      
Mechanisms controlling phosphorus (P) availability and the roles of microorganisms in the efficient utilization of soil P in the wheat–maize double cropping system are poorly understood.  In the present study, we conducted a pot experiment for four consecutive wheat–maize seasons (2016–2018) using calcareous soils with high (30.36 mg kg–1) and low (9.78 mg kg–1) initial Olsen-P content to evaluate the effects of conventional P fertilizer application to both wheat and maize (Pwm) along with a reduced P fertilizer application only to wheat (Pw).  The microbial community structure along with soil P availability parameters and crop yield were determined.  The results showed that the Pw treatment reduces the annual P input by 33.3% without affecting the total yield for at least two consecutive years as compared with the Pwm treatment in the high Olsen-P soil.  Soil water-soluble P concentrations in the Pw treatment were similar to those in the Pwm treatment at the 12-leaf collar stage when maize requires the most P.  Furthermore, the soil P content significantly affected soil microbial communities, especially fungal communities.  Meanwhile, the relative abundances of Proteobacteria and alkaline phosphatase (ALP) activity of Pw were significantly higher (by 11.4 and 13.3%) than those of Pwm in soil with high Olsen-P.  The microfloral contribution to yield was greater than that of soil P content in soil with high Olsen-P.  Relative abundances of Bacillus and Rhizobium were enriched in the Pw treatment compared with the Pwm treatment.  Bacillus showed a significant positive correlation with acid phosphatase (ACP) activity, and Rhizobium displayed significant positive correlations with ACP and ALP in soil with high Olsen-P, which may enhance P availability.  Our findings suggested that the application of P fertilization only to wheat is practical in high P soils to ensure optimal production in the wheat and maize double cropping system and that the soil P availability and microbial community may collaborate to maintain optimal yield in a wheat–maize double cropping system.


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Variation of carbon partitioning in newly expanded maize leaves and plant adaptive growth under extended darkness
LIANG Xiao-gui, SHEN Si, GAO Zhen, ZHANG Li, ZHAO Xue, ZHOU Shun-li
2021, 20 (9): 2360-2371.   DOI: 10.1016/S2095-3119(20)63351-2
Abstract142)      PDF in ScienceDirect      
Plants must maintain a balance between their carbon (C) supply and utilization during the day–night cycle for continuous growth since C starvation often causes irreversible damage to crop production.  It is not well known how C fixation and allocation in the leaves of crops such as maize adapt to sudden environmental changes.  Here, to quantify primary C fixation and partitioning in photosynthetic maize leaves under extended darkness and to relate these factors to plant growth, maize seedlings were subjected to extended darkness (ED) for three successive days at the 6th leaf fully expanded stage (V6).  ED reduced plant growth and leaf chlorophyll levels but not the rate of net CO2 exchange.  As a result of the reduction in photoassimilates, the accumulation of starch and total soluble carbohydrates (TSC) in mature leaves also decreased under ED.  However, the percentage of the daily C fixation reserved in mature leaves increased.  These transient C pools were largely composed of TSC and were mainly used for consumption by increased nocturnal respiration rather than for transport.  As the days went on, both the amount of C accumulated and the percentage of the daily fixed C that was reserved in leaves decreased, which could be largely accounted for by the attenuated starch synthesis in all treatments.  The activities of ADP-glucose pyrophosphorylase and soluble starch synthase decreased significantly over time.  Therefore, this study concluded that both starch and TSC are involved in the coordination of the C supply and plant growth under a sudden C shortage but that they may be involved in different ways.  While the ratio of reserved C to daily fixed C increased to maintain blade function under acute C starvation, both the amount and the proportion of C reserved in mature leaves decreased as plant growth continued in order to meet the growth demands of the plant.
 
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A simulation of winter wheat crop responses to irrigation management using CERES-Wheat model in the North China Plain
ZHOU Li-li, LIAO Shu-hua, WANG Zhi-min, WANG Pu, ZHANG Ying-hua, YAN Hai-jun, GAO Zhen, SHEN Si, LIANG Xiao-gui, WANG Jia-hui, ZHOU Shun-li
2018, 17 (05): 1181-1193.   DOI: 10.1016/S2095-3119(17)61818-5
Abstract540)      PDF (1260KB)(256)      
To improve efficiency in the use of water resources in water-limited environments such as the North China Plain (NCP), where winter wheat is a major and groundwater-consuming crop, the application of water-saving irrigation strategies must be considered as a method for the sustainable development of water resources.  The initial objective of this study was to evaluate and validate the ability of the CERES-Wheat model simulation to predict the winter wheat grain yield, biomass yield and water use efficiency (WUE) responses to different irrigation management methods in the NCP.  The results from evaluation and validation analyses were compared to observed data from 8 field experiments, and the results indicated that the model can accurately predict these parameters.  The modified CERES-Wheat model was then used to simulate the development and growth of winter wheat under different irrigation treatments ranging from rainfed to four irrigation applications (full irrigation) using historical weather data from crop seasons over 33 years (1981–2014).  The data were classified into three types according to seasonal precipitation: <100 mm, 100–140 mm, and >140 mm.  Our results showed that the grain and biomass yield, harvest index (HI) and WUE responses to irrigation management were influenced by precipitation among years, whereby yield increased with higher precipitation.  Scenario simulation analysis also showed that two irrigation applications of 75 mm each at the jointing stage and anthesis stage (T3) resulted in the highest grain yield and WUE among the irrigation treatments.  Meanwhile, productivity in this treatment remained stable through different precipitation levels among years.  One irrigation at the jointing stage (T1) improved grain yield compared to the rainfed treatment and resulted in yield values near those of T3, especially when precipitation was higher.  These results indicate that T3 is the most suitable irrigation strategy under variable precipitation regimes for stable yield of winter wheat with maximum water savings in the NCP.  The application of one irrigation at the jointing stage may also serve as an alternative irrigation strategy for further reducing irrigation for sustainable water resources management in this area.
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Identification and expression patterns of alcohol dehydrogenase genes involving in ester volatile biosynthesis in pear fruit
QIN Gai-hua, QI Xiao-xiao, QI Yong-jie, GAO Zheng-hui, YI Xing-kai, PAN Hai-fa, XU Yi-liu
2017, 16 (08): 1742-1750.   DOI: 10.1016/S2095-3119(17)61686-1
Abstract849)      PDF in ScienceDirect      
    Alcohol dehydrogenase (ADH) catalyzes the interconversion of aldehydes and their corresponding alcohols, and is a key enzyme in volatile ester biosynthesis. However, little is known regarding ADH and ADH encoding genes (ADHs) in pear. We identified 8 ADHs in the pear’s genome (PbrADHs) by multiple sequences alignment. The PbrADHs were highly homologous in their coding regions, while were diversiform in structure. 9 introns were predicted in PbrADH3PbrADH8, while 8 introns, generated through exon fusion and intron loss, were predicted in PbrADH1 and PbrADH2. To study the genetic regulation underlying aroma biogenesis in pear fruit, we determined the PbrADH transcripts, ADH activities and volatile contents of fruits during ripening stage for Nanguoli and Dangshansuli, two cultivars having different aroma characteristics. ADH activity was strongly associated with the transcription of ADH6 in the two cultivars during fruit ripening stage. The higher ester content paralleling to a higher ADH activity was detected in Nanguoli than in Dangshansuli, so it is induced that the lower ester content in Dangshansuli fruit may be the result of weak ADH activity. The present study revealed that total ADH activity and volatile ester production correlated with increased PbrADH6 transcript levels. PbrADH6 may contribute to ADH activity catalyzing aldehyde reduction and ester formation in pear fruit.
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Performance of Three Adelphocoris spp. (Hemiptera: Miridae) on Flowering and Non-flowering Cotton and Alfalfa
GAO Zhen, PAN Hong-sheng, LIU Bing, LU Yan-hui and LIANG Ge-mei
2014, 13 (8): 1727-1735.   DOI: 10.1016/S2095-3119(13)60592-4
Abstract1328)      PDF in ScienceDirect      
The genus Adelphocoris (Hemiptera: Miridae) is a group of key insect pests in cotton fields in China that includes three dominant species: A. suturalis (Jakovlev), A. lineolatus (Goeze) and A. fasciaticollis (Reuter). Previous field surveys have found that adults of these Adelphocoris species usually move onto specific host plants when the plants enter the flowering stage. To determine the potential trade-offs for this host-plant preference behavior, the performance of these three Adelphocoris spp. on flowering and non-flowering cotton and alfalfa were compared in the laboratory. The results showed that Adelphocoris spp. had significantly higher nymphal developmental and survival rates, along with increased adult longevity and fecundity on flowering cotton and alfalfa than on non-flowering plants of either species. In addition, compared with cotton plants, alfalfa generally promoted better performance of these three Adelphocoris species, especially for A. lineolatus. Simple correlation analysis indicated that female adult longevity was positively correlated to male adult longevity and female fecundity, and female fecundity was positively correlated to nymphal development and survival rates. This study demonstrated a positive correlation between adult preference and offspring/adult performance for all three Adelphocoris species, with no evidence of any trade-offs for this preference for flowering host plants. These findings support the hypothesis that hemimetabolous insects such as mirid bugs have positive adult preference-adult/nymphal performance relationships, which is likely due to the similar feeding habits and nutritional requirements of adults and nymphs.
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Sequencing and Phylogenetic Analysis of Potato virus Y Liaoning Isolate in China
WANG Fang, GAO Zheng-liang, AN Meng-nan, ZHOU Ben-guo , WU Yuan-hua
2013, 12 (7): 1195-1200.   DOI: 10.1016/S2095-3119(13)60442-6
Abstract1657)      PDF in ScienceDirect      
Complete genome sequence of Potato virus Y Liaoning isolate (PVY-LN) causing tobacco vein necrosis symptoms were isolated from Liaoning Province in China. Genome sequences of PVY-LN was 9 714 nucleotides in length, excluding the 3´- terminal poly (A) tail. PVY-LN encodes a single long open reading frame (ORF) of polyprotein that is predicted to be cleaved into ten mature proteins by three viral proteases. No recombination can be predicted in PVY-LN sequences compared with that of the other PVY strains using Recombination Detection Programe v. 4.16 (RDP4). Complete genome sequence comparison and phylogenetic analysis indicated that PVY-LN is closely related to PVY necrosis strain (PVYN).
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