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Characterization and correlation of engineering properties with microstructure in peanuts: A microscopic to macroscopic analysis
Fei Xiang, Zhenyuan Li, Yichen Zheng, Caixia Ding, Benu Adhikari, Xiaojie Ma, Xuebing Xu, Jinjin Zhu, Bello Zaki Abubakar, Aimin Shi, Hui Hu, Qiang Wang
2025, 24 (1): 339-352.   DOI: 10.1016/j.jia.2024.11.037
Abstract42)      PDF in ScienceDirect      

Peanut varieties are diverse globally, with their characters and nutrition determining the product quality.  However, the comparative analysis and statistical analysis of key quality indicators for peanut kernels across the world remains relatively limited, impeding the comprehensive evaluation of peanut quality and hindering the industry development on a global scale.  This study aimed to compare and analyze the apparent morphology, microstructure, single-cell structure, engineering and mechanical properties, as well as major nutrient contents of peanut kernels from 10 different cultivars representing major peanut-producing countries.  The surface and cross-section microstructure of the peanut kernels exhibited a dense “blocky” appearance with a distinct cellular structure.  The lipid droplets were predominantly spherical with a regular distribution within the cells.  The single-cell structure of the kernels from these 10 peanut cultivars demonstrated varying morphologies and dimensions, which exhibited correlations with their mechanical and engineering properties.  Furthermore, the mass loss versus temperature profiles of the peanut kernels revealed five distinct stages, corresponding to moisture loss, volatile loss, protein denaturation, and the degradation of various biomacromolecules.  Variations were also observed in the lipid, protein, and sucrose contents, texture, bulk density, true density, porosity, geometric mean diameter, and sphericity among the different peanut varieties.  This study establishes relationships and correlations among microstructure, engineering properties, and nutritional composition of commonly grown peanut varieties in major peanut-processing countries.  The findings provide valuable insights into peanut quality evaluation, empowering the peanut industry to enhance their processing and product development efforts.

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Local nitrogen application increases maize post-silking nitrogen uptake of responsive genotypes via enhanced deep root growth
CHEN Zhe, REN Wei, YI Xia, LI Qiang, CAI Hong-guang, Farhan ALI, YUAN Li-xing, MI Guo-hua, PAN Qing-chun, CHEN Fan-jun
2023, 22 (1): 235-250.   DOI: 10.1016/j.jia.2022.07.003
Abstract389)      PDF in ScienceDirect      

Nitrogen (N) is unevenly distributed throughout the soil and plant roots proliferate in N-rich soil patches.  However, the relationship between the root response to localized N supply and maize N uptake efficiency among different genotypes is unclear.  In this study, four maize varieties were evaluated to explore genotypic differences in the root response to local N application in relation to N uptake.  A split-root system was established for hydroponically-grown plants and two methods of local N application (local banding and local dotting) were examined in the field.  Genotypic differences in the root length response to N were highly correlated between the hydroponic and field conditions (r>0.99).  Genotypes showing high response to N, ZD958, XY335 and XF32D22, showed 50‒63% longer lateral root length and 36‒53% greater root biomass in N-rich regions under hydroponic conditions, while the LY13 genotype did not respond to N.  Under field conditions, the root length of the high-response genotypes was found to increase by 66‒75% at 40‒60 cm soil depth, while LY13 showed smaller changes in root length.  In addition, local N application increased N uptake at the post-silking stage by 16‒88% in the high-response genotypes and increased the grain yield of ZD958 by 10‒12%.  Moreover, yield was positively correlated with root length at 40‒60 cm soil depth (r=0.39).  We conclude that local fertilization should be used for high-response genotypes, which can be rapidly identified at the seedling stage, and selection for “local-N responsive roots” can be a promising trait in maize breeding for high nitrogen uptake efficiency.  


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Construction of high-density SNP genetic maps and QTL mapping for dwarf-related traits in Litchi chinensis Sonn
HU Fu-chu, CHEN Zhe, WANG Xiang-he, WANG Jia-bao, FAN Hong-yan, QIN Yong-hua, ZHAO Jietang, HU Gui-bing
2021, 20 (11): 2900-2913.   DOI: 10.1016/S2095-3119(20)63387-1
Abstract199)      PDF in ScienceDirect      
Litchi chinensis Sonn is widely cultivated in subtropical regions and has an important economic value.  A high-density genetic map is a valuable tool for mapping quantitative trait loci (QTL) and marker-assisted breeding programs.   In this study, a single nucleotide polymorphism (SNP)-based high-density linkage map was constructed by a genotyping-by-sequencing (GBS) protocol using an F1 population of 178 progenies between two commercial litchi cultivars, ‘Ziniangxi’ (dwarf) and ‘Feizixiao’ (vigorous).  The genetic map consisted of 3 027 SNP markers with a total length of 1 711.97 cM in 15 linkage groups (LGs) and an average marker distance of 0.57 cM.  Based on this high-density linkage map and three years of phenotyping, a total of 37 QTLs were detected for eight dwarf-related traits, including length of new branch (LNB), diameter of new branch (DNB), length of common petiole (LCP), diameter of common petiole (DCP), length of internode (LI), length of single leaf (LSL), width of single leaf (WSL), and plant height (PH).  These QTLs could explain 8.0 to 14.7% (mean=9.7%) of the phenotypic variation.  Among them, several QTL clusters were observed, particularly on LG04 and LG11, which might show enrichment for genes regulating the dwarf-related traits in litchi.  There were 126 candidate genes identified within the QTL regions, 55 of which are differentially expressed genes by RNA-seq analysis between ‘Ziniangxi’ and ‘Feizixiao’.  These DEGs were found to participate in the regulation of cell development, material transportation, signal transduction, and plant morphogenesis, so they might play important roles in regulating plant dwarf-related traits.  The high-density genetic map and QTLs identification related to dwarf traits can provide a valuable genetic resource and a basis for marker-assisted selection and genomic studies of litchi.
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Alphaherpesvirus-vectored vaccines against animal diseases: Current progress
HU Yang, WANG Ming-shu, CHENG An-chun, JIA Ren-yong, YANG Qiao, WU Ying, LIU Ma-feng, ZHAO Xin-xin, ZHU De-kang, CHEN Shun, ZHANG Sha-qiu, WANG Yin, GAO Qun, OU Xu-min, MAO Sai, WEN Xing-jian, XU Zhi-wen, CHEN Zheng-li, ZHU Ling, LUO Qi-hui, TIAN Bin, PAN Lei-chang, Mujeeb Ur REHMAN, LIU Yun-ya, YU Yan-ling, ZHANG Ling, CHEN Xiao-yue
2020, 19 (8): 1928-1940.   DOI: 10.1016/S2095-3119(20)63175-6
Abstract242)      PDF in ScienceDirect      
Recombinant virus-vectored vaccines are novel agents that can effectively activate specific and nonspecific immunity, are multivalent and multieffective, and have high safety ratings.  Animal alphaherpesviruses have a large genome, contain multiple nonessential regions that do not affect viral replication and are capable of accepting the insertion of an exogenous gene and expressing the antigen protein.  Furthermore, animal alphaherpesviruses have a wide host spectrum, can replicate in the host and continuously stimulate the animal to produce immunity to the corresponding pathogen, thus making them ideal carriers for recombinant virus-vectored vaccines.  With the development of gene-editing technology, recombinant viruses capable of expressing foreign genes can be constructed by various methods.  Currently, studies on recombinant virus-vectored vaccines constructed based on animal alphaherpesviruses have involved poultry, pigs, cattle, sheep, and companion animals.  Studies have shown that the construction of recombinant animal alphaherpesviruses enables the acquisition of immunity to multiple diseases.  This article mainly summarizes the current progress on animal alphaherpesvirus-vectored vaccines, aiming to provide reference for the development of new animal alphaherpesvirus-vectored vaccines.
 
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Nitrous oxide emissions following seasonal freeze-thaw events from arable soils in Northeast China
CHEN Zhe, YANG Shi-qi, ZHANG Ai-ping, JING Xin, SONG Wei-min, MI Zhao-rong, ZHANG Qingwen, WANG Wen-ying, YANG Zheng-li
2018, 17 (01): 231-246.   DOI: 10.1016/S2095-3119(17)61738-6
Abstract614)      PDF in ScienceDirect      
Seasonal soil freeze-thaw events may enhance soil nitrogen transformation and thus stimulate nitrous oxide (N2O) emissions in cold regions.  However, the mechanisms of soil N2O emission during the freeze-thaw cycling in the field remain unclear.  We evaluated N2O emissions and soil biotic and abiotic factors in maize and paddy fields over 20 months in Northeast China, and the structural equation model (SEM) was used to determine which factors affected N2O production during non-growing season.  Our results verified that the seasonal freeze-thaw cycles mitigated the available soil nitrogen and carbon limitation during spring thawing period, but simultaneously increased the gaseous N2O-N losses at the annual time scale under field condition.  The N2O-N cumulative losses during the non-growing season amounted to 0.71 and 0.55 kg N ha–1 for the paddy and maize fields, respectively, and contributed to 66 and 18% of the annual total.  The highest emission rates (199.2–257.4 μg m–2 h–1) were observed during soil thawing for both fields, but we did not observe an emission peak during soil freezing in early winter.  Although the pulses of N2O emission in spring were short-lived (18 d), it resulted in approximately 80% of the non-growing season N2O-N loss.  The N2O burst during the spring thawing was triggered by the combined impact of high soil moisture, flush available nitrogen and carbon, and rapid recovery of microbial biomass.  SEM analysis indicated that the soil moisture, available substrates including NH4+ and dissolved organic carbon (DOC), and microbial biomass nitrogen (MBN) explained 32, 36, 16 and 51% of the N2O flux variation, respectively, during the non-growing season.  Our results suggested that N2O emission during the spring thawing make a vital contribution of the annual nitrogen budget, and the vast seasonally frozen and snow-covered croplands will have high potential to exert a positive feedback on climate change considering the sensitive response of nitrogen biogeochemical cycling to the freeze-thaw disturbance.   
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Dissection of the genetic architecture for tassel branch number by QTL analysis in two related populations in maize
CHEN Zheng-jie, YANG Cong, TANG Deng-guo, ZHANG Lei, ZHANG Ling, QU Jing-tao, LIU Jian
2017, 16 (07): 1432-1442.   DOI: 10.1016/S2095-3119(16)61538-1
Abstract1011)      PDF in ScienceDirect      
    Tassel branch number (TBN) is the principal component of maize tassel inflorescence architecture and is a typical quantitative trait controlled by multiple genes. The main objective of this research was to detect quantitative trait loci (QTLs) for TBN. The maize inbred line SICAU1212 was used as the common parent to develop BC1S1 and recombinant inbred line (RIL) populations with inbred lines 3237 and B73, respectively. The two related populations consisted of 123 and 238 lines, respectively. Each population was grown and phenotyped for TBN in two environments. Eleven QTLs were detected in the BC1S1 population, located on chromosomes 2, 3, 5, and 7, accounted for 4.45–26.58% of the phenotypic variation. Two QTLs (qB11Jtbn2-1, qB12Ctbn2-1, qBJtbn2-1; q11JBtbn5-1, qB12Ctbn5-1, qBJtbn5-1) that accounted for more than 10% of the phenotypic variation were identified. Three QTLs located on chromosomes 2, 3 and 5, exhibited stable expression in the two environments. Ten QTLs were detected in the RIL population, located on chromosomes 2, 3, 5, 8, and 10, accounted for 2.69–13.58% of the TBN variation. One QTL (qR14Dtbn2-2) explained >10% of the phenotypic variation. One common QTL (qB12Ctbn2-2, qR14Dtbn2-2, qRJtbn2-2) was detected between the two related populations. Three pairs of epistatic effects were identified between two loci with or without additive effects and accounted for 1.19–4.26% of the phenotypic variance. These results demonstrated that TBN variation was mainly caused by major effects, minor effects and slightly modified by epistatic effects. Thus, identification of QTL for TBN may help elucidate the genetic basis of TBN and also facilitate map-based cloning and marker-assisted selection (MAS) in maize breeding programs.
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Development and detection application of monoclonal antibodies against Zucchini yellow mosaic virus
CHEN Zhe, ZHANG Ming-hao, ZHOU Xue-ping, WU Jian-xiang
2017, 16 (01): 115-124.   DOI: 10.1016/S2095-3119(16)61416-8
Abstract998)      PDF in ScienceDirect      
Aphid-borne Zucchini yellow mosaic virus (ZYMV) is one of the most economically important viruses of cucurbitaceous plants.  To survey and control this virus, it is necessary to develop an efficient detection technique.  Using purified ZYMV virion and the conventional hybridoma technology, three hybridoma cell lines (16A11, 5A7 and 3B8) secreting monoclonal antibodies (MAbs) against ZYMV Zhejiang isolate were obtained.  The working titers of the ascitic fluids secreted by the three hybridoma cell lines were up to 10–7 by indirect enzyme-linked immunosorbent assay (ELISA).  All MAbs were isotyped as IgG1, kappa light chain.  Western blot analysis indicated that the MAb 3B8 could specifically react with the coat protein of ZYMV while MAbs 5A7 and 16A11 reacted strongly with a protein of approximately 51 kDa from the ZYMV-infected leaf tissues.  According to this molecular weight, we consider this reactive protein is likely to be the HC-Pro protein.  Using these three MAbs, we have now developed five detection assays, i.e., antigen-coated-plate ELISA (ACP-ELISA), dot-ELISA, tissue blot-ELISA, double-antibody sandwich ELISA (DAS-ELISA), and immunocapture-RT-PCR (IC-RT-PCR), for the sensitive, specific, and easy detection of ZYMV.  The sensitivity test revealed that ZYMV could be readily detected respectively by ACP-ELISA, dot-ELISA, DAS-ELISA and IC-RT-PCR in 1:163 840, 1:2 560, 1:327 680 and 1:1 310 720 (w/v, g mL–1) diluted crude extracts from the ZYMV-infected plants.  We demonstrated in this study that the dot-ELISA could also be used to detect ZYMV in individual viruliferous aphids.  A total of 275 cucurbitaceous plant samples collected from the Zhejiang, Jiangsu, Shandong and Hainan provinces, China, were screened for the presence of ZYMV with the described assays.  Our results showed that 163 of the 275 samples (59%) were infected with ZYMV.  This finding indicates that ZYMV is now widely present in cucurbitaceous crops in China.  RT-PCR followed by DNA sequencing and sequence analyses confirmed the accuracy of the five assays.  We consider that these detection assays can significantly benefit the control of ZYMV in China.  
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Using side-dressing technique to reduce nitrogen leaching and improve nitrogen recovery efficiency under an irrigated rice system in the upper reaches of Yellow River Basin, Northwest China
ZHANG Ai-ping, GAO Ji, LIU Ru-liang, ZHANG Qing-wen, CHEN Zhe, YANG Shi-qi, YANG Zheng-li
2016, 15 (1): 220-231.   DOI: 10.1016/S2095-3119(14)60952-7
Abstract1936)      PDF in ScienceDirect      
The excessive nitrogen (N) fertilizer input coupled with flood irrigation might result in higher N leaching and lower nitrogen recovery efficiency (NRE). Under an intensive rice system in the Ningxia irrigation region, China, environmental friendly N management practices are heavily needed to balance the amount of N input for optimum crop production while minimize the nitrogen loss. The objective of this study was to determine the influences of side-dressing (SD) technique in mechanical transplanting systems on the NRE, N leaching losses and rice yield in anthropogenic-alluvial soil during two rice growing seasons (2010-2011). Four fertilizer N treatments were established, including conventional urea rate (CU, 300 kg ha–1 yr–1); higher SD of controlled-release N fertilizer rate (SD1, 176 kg ha–1 yr–1); lower SD of controlled-release N fertilizer rate (SD2, 125 kg ha–1 yr–1); and control (CK, no N fertilizer). Field lysimeters were used to quantify drainage from undisturbed soil during six rice growing stages. Meanwhile, the temporal variations of total nitrigen (TN), NO3 –-N, and NH4 +-N concentrations in percolation water were examined. The results showed that SD1 substantially improved NRE and reduced N leaching losses while maintaining rice yields. Across two years, the averaged NRE under SD1 treatment increased by 25.5% as relative to CU, but yet the rice yield was similar between two treatments. On average, the nitrogen loss defined as TN, NH4 +-N, and NO3 –-N under the SD1 treatment reduced by 27.4, 37.2 and 24.1%, respectively, when compared with CU during the study periods. Although the SD2 treatment could further reduce N leaching loss to some extent, this technique would sharply decline rice yield, with the magnitude of as high as 21.0% relative to CU treatment. Additionally, the average NRE under SD2 was 11.2% lower than that under SD1 treatment. Overall, the present study concluded that the SD technique is an effective strategy to reduce N leaching and increase NRE, thus potentially mitigate local environmental threat. We propose SD1 as a novel alternative fertilizer technique under an irrigated rice-based system in Ningxia irrigation region when higher yields are under consideration.
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Programmed cell death, antioxidant response and oxidative stress in wheat flag leaves induced by chemical hybridization agent SQ-1
WANG Shu-ping, ZHANG Gai-sheng, SONG Qi-lu, ZHANG Ying-xin, LI Ying, GUO Jia-lin, CHEN Zheng, NIU Na, MA Shou-cai, WANG Jun-wei
2016, 15 (1): 76-86.   DOI: 10.1016/S2095-3119(14)60977-1
Abstract2101)      PDF in ScienceDirect      
Male sterility induced by a chemical hybridization agent (CHA) is an important tool for utilizing crop heterosis. Leaves, especially the flag leaves, as CHA initial recipients play a decisive role in inducing male sterility. To investigate effects of different treatment times of CHA-SQ-1 used, morphological, biochemical and physiological responses of wheat flag leaves were detected in this study. CHA induced programmed cell death (PCD) as shown in terminal deoxynucleotidyl transferase-mediated dUTP nick end-labelling (TUNEL) and DNA laddering analysis. In the early phase, CHA-SQ-1 triggered organelle changes and PCD in wheat leaves accompanied by excess production of reactive oxygen species (O2 -. and H2O2) and down-regulation of the activities of superoxide dismutase (SOD), catalase (CAT) and guaiacol peroxidase (POD). Meanwhile, leaf cell DNAs showed ladder-like patterns on agarose gel, indicating that CHA-SQ-1 led to the activation of the responsible endonuclease. The oxidative stress assays showed that lipid peroxidation was strongly activated and photosynthesis was obviously inhibited in SQ-1-induced leaves. However, CHA contents in wheat leaves gradually reduced along with the time CHA-SQ-1 applied. Young flags returned to an oxidative/antioxidative balance and ultimately developed into mature green leaves. These results provide explanation of the relations between PCD and anther abortion and practical application of CHA for hybrid breeding.
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Penetration of a Single Domain of Bacillus thuringiensis Cry1Ie-Domain I to a Lipid Membrane In vitro
GUO Shu-yuan, LI Jie, CHEN Zhen , HE Kang-lai
2014, 13 (5): 1043-1050.   DOI: 10.1016/S2095-3119(13)60589-4
Abstract1937)      PDF in ScienceDirect      
Domain I of the activated Crystal protein from Bacillus thuringiensis has a seven α-helix bundle structure, which is responsible for membrane channel formation in its insecticidal mechanism. Cry1Ie is toxic to Asian corn borer, Ostrinia furnacalis (Guenée), and plays important roles in insect biological control. The domain I from Cry1Ie has been expressed and purified in its normal conformation, as embedded in the full length homologous toxin structure. The membrane insertion ability of this single domain was compared with the full length homologous toxin using a monolayer insertion experiment. The results indicated that the Cry1Ie-domain I had the ability to insert into the lipid monolayer, and this ability is greater than that of the IE648 toxin. However, the state of insertion is not stable and remains for only a short period of time. The Cry1Ie-domain I plays no role in receptor binding as it had a nonspecific binding with the brush border membrane vesicles of the Asian corn borer.
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The Effect of Glycyl-Glutamine Dipeptide Concentration on Enzyme Activity,Cell Proliferation and Apoptosis of Jejunal Tissues from Weaned Piglets
WANG Hui, JIA Gang, CHEN Zheng-li, HUANG Lan, WU Cai-mei, WANG Kang-ning
2011, 10 (7): 1088-1095.   DOI: 10.1016/S1671-2927(11)60098-9
Abstract1645)      PDF in ScienceDirect      
An experiment was conducted in a singly factorial design to study the effect of glycyl-glutamine dipeptide on enzymeactivity, cell proliferation and apoptosis of jejunal tissues from weaned piglets at different glycyl-glutamine concentrationlevels of 2, 4, 10, 20, and 30 mmol L-1, respectively. The glutaminase activity, diamine oxidase (DAO) activity, cellpeoliferation, apoptosis, and perotein metabolism were measured by the tissue culture method in vitro using jejunaltissues. The immunohistochemical method was used to study the cell proliferation and apoptosis of jejunal tissues. Theresults showed that compared to the blank control, the percentage and MOD value of BrdU-positicve cells incubated withglycyl-glutamine dipeptide solution were significantly (P<0.05) increased. Accordingly, the percentage and MOD valueof caspase-3-positive cells from tissue incubated with glycyl-glutamine dipeptide were notably lower (P<0.05) than thatfrom the control treatment. The glycyl-glutamine dipeptide increased the glutaminase activity, DAO activity and proteincontent of jejunal tissues, as the dipeptide concentration was on the rise (P<0.05). These results indicated that glycylglutaminedipeptide affected the jejunum development and adaptation of weaned piglets, and the function might befulfilled by enhancing the glutamine-related enzyme activity, thereby increasing the consumption of glutamine, and thenimproving the jejunal cell proliferation and suppressing cell apoptosis. The effects of glycyl-glutamine dipeptide relied ina dose-dependent manner, and the maximum effect was achieved at 20-30 mmol L-1 glycyl-glutamine dipeptide.
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