期刊
  出版年
  关键词
结果中检索 Open Search
Please wait a minute...
选择: 显示/隐藏图片
1. JIA-2021-0185 外源多效唑和取样时间对无核葡萄新品种选育中体外胚挽救的影响
XU Teng-fei, GUO Yu-rui, YUAN Xiao-jian, CHU Yan-nan, WANG Xiao-wei, HAN Yu-lei, WANG Wen-yuan, WANG Yue-jin, SONG Rui, FANG Yu-lin, WANG Lu-jun, XU Yan
Journal of Integrative Agriculture    2022, 21 (6): 1633-1644.   DOI: 10.1016/S2095-3119(21)63815-7
摘要348)      PDF    收藏

本研究调查了香味和抗寒无核品种选育中不同浓度的多效唑及胚采集时期对胚形成、萌发和成苗率的影响。结果显示,不同浓度的多效唑对不同葡萄品种子房和胚的发育影响不一致。红无籽露×北冰红和昆香无核×泰山-2组合在1.5 mg L-1多效唑处理下胚形成率最高。红无籽露×北冰红组合在1.0 μmol L-1多效唑处理下萌芽率和成苗率最高,但红无籽露×昆香无核组合在0.2 μmol L-1多效唑处理下萌芽率最好。不同的杂交组合取胚时间也不同。火焰无核×玫瑰香最佳取胚时间为授粉后39 d,昆香无核×北冰红为授粉后46 d,红宝石无核×北冰红及奇妙无核×双优为授粉后41 d。另外,向培养基中补充0.5 mg L-1吲哚丁酸可以帮助畸形苗恢复为正常幼苗并获得生长健壮的子代。研究结果将为利用胚挽救技术选育无核葡萄新品种奠定基础


参考文献 | 相关文章 | 多维度评价
2. 小麦DnaJ家族的全基因组鉴定及其对小麦黄花叶病毒侵染的调控分析
LIU Ting-ting, XU Miao-ze, GAO Shi-qi, ZHANG Yang, HU Yang, JIN Peng, CAI Lin-na, CHENG Ye, CHEN Jian-ping, YANG Jian, ZHONG Kai-li
Journal of Integrative Agriculture    2022, 21 (1): 153-169.   DOI: 10.1016/S2095-3119(21)63619-5
摘要258)      PDF    收藏

DnaJ蛋白最初是在大肠杆菌中鉴定的一种大小约为41kDa的热休克蛋白,其蛋白家族是分子伴侣中最多样化的家族,在蛋白质折叠和各种生理活动的调节中扮演了重要角色,且在植物发育和胁迫应答中发挥重要作用。DnaJ家族蛋白已在许多物种中广泛研究,例如人类,果蝇,蘑菇,西红柿和拟南芥等,但在小麦中的作用以及其与植物病毒之间的相互作用机制却鲜少有研究。在这篇文章中,我们鉴定了236TaDnaJs,并对其保守结构域,基因结构蛋白质基序蛋白质结构染色体定位和共线性以及顺式作用元件进行了全基因组分析。根据分析结果,我们将这些TaDnaJs按其结构域分DJADJBDJC三组,并从分组中随机选择了6个基因进行组织特异性分析和激素胁迫下的基因表达谱分析,结果表明TaDnaJ基因在不同组中存在组织差异表达,DJA组的基因表达集中顶部叶片,对ABAGA更为敏感;DJB组的基因表达水平在根和种子中最高,对ABA更为敏感;DJC组中的基因表达在小麦叶片中最高,其次是根和种子,对SAGA最敏感。另外我们随机选择了17个基因分析植物病毒侵染后基因表达水平的变化,结果显示,在测试的17TaDnaJ基因中,有16个基因在小麦黄花叶病毒(WYMV染后呈现上调表达,这表明TaDnaJ家族可能参与了植物防御反应。随后我们通过酵母两杂交实验验证了WYMV NIaNIb7KD蛋白与WYMV染后表达水平变化最显著的TraesCS7A02G506000相互作用。在这篇文章中,我们探究了DnaJ蛋白介导的胁迫耐受性和敏感性的分子机制,DnaJ基因可能参与了植物对非生物和生物胁迫的抗性。本研究提高了对TaDnaJ基因表达谱认识,并且为TaDnaJ家族与植物防御机制之间的研究提供了一定的研究基础。

参考文献 | 相关文章 | 多维度评价
3. 不同生育期和施氮量的冬小麦叶色动态模拟
ZHANG Yong-hui, YANG Yu-bin, CHEN Chun-lei, ZHANG Kui-ting, JIANG Hai-yan, CAO Wei-xing, ZHU Yan
Journal of Integrative Agriculture    2022, 21 (1): 60-69.   DOI: 10.1016/S2095-3119(20)63319-6
摘要254)      PDF    收藏

本研究的目标是构建冬小麦叶片颜色动态模型,以模拟不同生育期和施氮水平下小麦不同叶位叶色变化。基于不同品种和施氮量下两个生长季的冬小麦试验,获取各主茎叶位叶片颜色的RGB(红、绿、蓝)数据。基于获取的RGB数据,构建了冬小麦叶片颜色动态模拟模型。结果表明,冬小麦叶片颜色变化经历了早期发育期(ES)、早熟期MS)和早衰期SS)三个不同的阶段,三个阶段的颜色特征分别为浅绿、深绿、黄色。在ES期,R和G颜色从初始值逐渐下降到稳定值,而B值基本保持不变。RGB值在MS阶段保持稳定,但在SS阶段三个值会逐渐增加到稳定值。采用不同的线性函数来模拟RGB值在时间和空间上的动态变化,在叶色模型中引入了品种参数(叶色矩阵MRGB)和氮素影响因子(FN)来量化它们各自的影响。利用独立的试验数据集对模型进行了检验,实测值与模拟值的均方根误差(RMSE)在7.0-10.0之间,相对RMSE(RRMSEs)在7%-9%之间。将叶色模型应用于冬小麦叶片的三维模拟,叶色可视化结果与叶色实际变化较为一致。此叶色模型可为作物在时空上生长发育的模拟提供坚实基础。

参考文献 | 相关文章 | 多维度评价
4. Alphaherpesvirus-vectored vaccines against animal diseases: Current progress
HU Yang, WANG Ming-shu, CHENG An-chun, JIA Ren-yong, YANG Qiao, WU Ying, LIU Ma-feng, ZHAO Xin-xin, ZHU De-kang, CHEN Shun, ZHANG Sha-qiu, WANG Yin, GAO Qun, OU Xu-min, MAO Sai, WEN Xing-jian, XU Zhi-wen, CHEN Zheng-li, ZHU Ling, LUO Qi-hui, TIAN Bin, PAN Lei-chang, Mujeeb Ur REHMAN, LIU Yun-ya, YU Yan-ling, ZHANG Ling, CHEN Xiao-yue
Journal of Integrative Agriculture    2020, 19 (8): 1928-1940.   DOI: 10.1016/S2095-3119(20)63175-6
摘要242)      PDF    收藏

重组病毒活载体疫苗是一种能够有效激活特异性和非特异性免疫、可多联多价、安全性的新型疫苗。动物α疱疹病毒拥有较大的基因组,含有多个不影响病毒复制的非必需区,能够插入接受外源基因并表达相应抗原蛋白同时具有较广泛的宿主谱,能够在宿主体内复制并持续刺激动物产生对抗相应病原的免疫力,是作为重组病毒活载体疫苗的理想载体。随着基因编辑技术的发展,可通过多种方法构建能够表达外源基因的重组病毒。目前以动物α疱疹病毒为载体的重组病毒活载体疫苗研究已经涉及禽类、猪、牛、羊、伴侣动物等,目前成功构建的多株重组动物α疱疹病毒能免疫后可使动物同时获得对多种疾病的免疫。本文总结了重组动物α疱疹病毒构建方法、外源基因的引入和表达以及动物α疱疹病毒活载体疫苗免疫作用三个方面的内容,包括了最新的基因编辑技术、不同的构建策略及其优缺点、外源基因的选择、插入形式和位点等,并介绍了各动物α疱疹病毒活载体疫苗的最新研究进展,旨在为新型动物α疱疹病毒活载体疫苗的研究和开发提供一定的参考。

参考文献 | 相关文章 | 多维度评价
5.
A rapid, simple, and sensitive immunoagglutination assay with silica nanoparticles for serotype identification of Pseudomonas aeruginosa
DONG Xiu-mei, TAO Jing, LI Ting-ting, ZHANG Ping, ZHU Yan, TANG Yu, SU Rui-hong, SHI Dong-fang
Journal of Integrative Agriculture    2019, 18 (8): 1936-1943.   DOI: 10.1016/S2095-3119(18)62135-5
摘要159)      PDF    收藏
An agglutination test based on colored silica nanoparticles (colored SiNps) was established to detect serotypes of Pseudomonas aeruginosa.  Monodisperse colored SiNps were used as agglutination test carriers.  The colored SiNps were prepared through reverse microemulsion with reactive dyes, sensitized with 11 kinds of mono-specific antibodies against P. aeruginosa, and denoted as IgG-colored SiNps.  Eleven kinds of IgG-colored SiNps were individually mixed with P. aeruginosa on a glass slide.  Different serotypes of P. aeruginosa could be identified by agglutination test with evident agglutination.  The P. aeruginosa could be detected in a range from 3.6×105 to 3.6×1012 cfu mL–1.  This new agglutination test was confirmed to be a speci?c, sensitive, fast, easy-to-perform, and cost-ef?cient tool for the routine diagnosis of P. aeruginosa.
参考文献 | 相关文章 | 多维度评价
6. The effects of aerated irrigation on soil respiration, oxygen, and porosity
ZHU Yan, Miles Dyck, CAI Huan-jie, SONG Li-bing, CHEN Hui
Journal of Integrative Agriculture    2019, 18 (12): 2854-2868.   DOI: 10.1016/S2095-3119(19)62618-3
摘要112)      PDF    收藏
To ameliorate soil oxygen deficiencies around subsurface drip irrigation (SDI) drippers, aerated irrigation (AI) was introduced to supply aerated water to the soil through venturi installed in the SDI pipeline.  The objectives of this study were to assess the effects of AI on soil respiration (SR), air-filled porosity (AFP), soil temperature (ST), and oxygen concentrations (OCC).  Total soil respiration (TSR), biological activity temperature index (BAT), and soil oxygen consumption (OCS) based on SR, ST, and OCC, respectively, were subsequently calculated to explore the relationships between TSR, BAT, OCS, OCC, and AFP.  Greenhouse-based experiments included two treatments: AI and unaerated SDI (CK), during the tomato growing season in the fall of 2015.  The results showed that compared with CK, AI treatment significantly increased OCC and AFP (by 16 and 7.4%, respectively), as well as TSR and OCS (by 24.21 and 22.91%, respectively) (P<0.05).  Mean fruit yield with AI treatment was also 23% higher (P<0.05) than that with CK.  When BAT was controlled, partial correlations between TSR, OCS, OCC, and AFP were all significant in the AI treatment but not in the CK treatment.  TSR was more sensitive to the interaction effects of OCC, OCS, AFP, and BAT under the AI treatment.  Thus, the significantly increased TSR with AI appeared to be due to the favorable soil aeration conditi ons (higher OCC and AFP).  Furthermore, the improvements in soil aeration conditions and respiration with AI appeared to facilitate the improvement in fruit yields, which also suggests the economic benefits of AI.
参考文献 | 相关文章 | 多维度评价
7. The effects of aeration and irrigation regimes on soil CO2 and N2O emissions in a greenhouse tomato production system
CHEN Hui, HOU Hui-jing, WANG Xiao-yun, ZHU Yan, Qaisar Saddique, WANG Yun-fei, CAI Huan-jie
Journal of Integrative Agriculture    2018, 17 (2): 449-460.   DOI: 10.1016/S2095-3119(17)61761-1
摘要818)      PDF    收藏
Aerated irrigation has been proven to increase crop production and quality, but studies on its environmental impacts are sparse.  The effects of aeration and irrigation regimes on soil CO2 and N2O emissions in two consecutive greenhouse tomato rotation cycles in Northwest China were studied via the static closed chamber and gas chromatography technique.  Four treatments, aerated deficit irrigation (AI1), non-aerated deficit irrigation (CK1), aerated full irrigation (AI2) and non-aerated full irrigation (CK2), were performed.  The results showed that the tomato yield under aeration of each irrigation regime increased by 18.8% on average compared to non-aeration, and the difference was significant under full irrigation (P<0.05).  Full irrigation significantly increased the tomato yield by 23.9% on average in comparison to deficit irrigation.  Moreover, aeration increased the cumulative CO2 emissions compared to non-aeration, and treatment effects were significant in the autumn-winter season (P<0.05).  A slight increase of CO2 emissions in the two seasons was observed under full irrigation (P>0.05).  There was no significant difference between aeration and non-aeration in soil N2O emissions in the spring-summer season, whereas aeration enhanced N2O emissions significantly in the autumn-winter season.  Furthermore, full irrigation over the two seasons greatly increased soil N2O emissions compared to the deficit irrigation treatment (P<0.05).  Correlation analysis indicated that soil temperature was the primary factor influencing CO2 fluxes.  Soil temperature, soil moisture and NO3 were the primary factors influencing N2O fluxes.  Irrigation coupled with particular soil aeration practices may allow for a balance between crop production yield and greenhouse gas mitigation in greenhouse vegetable fields.
参考文献 | 相关文章 | 多维度评价
8. Collision detection of virtual plant based on bounding volume hierarchy: A case study on virtual wheat
TANG Liang, SONG Wei-guo, HOU Tian-cheng, LIU Lei-lei, CAO Wei-xing, ZHU Yan
Journal of Integrative Agriculture    2018, 17 (2): 306-314.   DOI: 10.1016/S2095-3119(17)61769-6
摘要802)      PDF    收藏
Visualization of simulated crop growth and development is of significant interest to crop research and production.  This study aims to address the phenomenon of organs cross-drawing by developing a method of collision detection for improving vivid 3D visualizations of virtual wheat crops.  First, the triangular data of leaves are generated with the tessellation of non-uniform rational B-splines surfaces.  Second, the bounding volumes (BVs) and bounding volume hierarchies (BVHs) of leaves are constructed based on the leaf morphological characteristics and the collision detection of two leaves are performed using the Separating Axis Theorem.  Third, the detecting effect of the above method is compared with the methods of traditional BVHs, Axis-Aligned Bounding Box (AABB) tree, and Oriented Bounding Box (OBB) tree.  Finally, the BVs of other organs (ear, stem, and leaf sheath) in virtual wheat plant are constructed based on their geometric morphology, and the collision detections are conducted at the organ, individual and population scales.  The results indicate that the collision detection method developed in this study can accurately detect collisions between organs, especially at the plant canopy level with high collision frequency.  This collision detection-based virtual crop visualization method could reduce the phenomenon of organs cross-drawing effectively and enhance the reality of visualizations.
参考文献 | 相关文章 | 多维度评价
9. Beneficial effects of silicon on photosynthesis of tomato seedlings under water stress
ZHANG Yi, SHI Yu, GONG Hai-jun, ZHAO Hai-liang, LI Huan-li, HU Yan-hong, WANG Yi-chao
Journal of Integrative Agriculture    2018, 17 (10): 2151-2159.   DOI: 10.1016/S2095-3119(18)62038-6
摘要694)      PDF(pc) (930KB)(1005)    收藏
Silicon can improve drought tolerance of plants, but the mechanism still remains unclear.  Previous studies have mainly concentrated on silicon-accumulating plants, whereas less work has been conducted in silicon-excluding plants, such as tomato (Solanum lycopersicum L.).  In this study, we investigated the effects of exogenous silicon (2.5 mmol L–1) on the chlorophyll fluorescence and expression of photosynthesis-related genes in tomato seedlings (Zhongza 9) under water stress induced by 10% (w/v) polyethylene glycol (PEG-6000).  The results showed that under water stress, the growth of shoot and root was inhibited, and the chlorophyll and carotenoid concentrations were decreased, while silicon addition improved the plant growth and increased the concentrations of chlorophyll and carotenoid.  Under water sterss, chlorophyll fluorescence parameters such as PSII maximum photochemical efficiency (Fv/Fm), effective quantum efficiency, actual photochemical quantum efficiency (ФPSII), photosynthetic electron transport rate (ETR), and photochemical quenching coefficient (qP) were decreased; while these changes were reversed in the presence of added silicon.  The expressions of some photosynthesis-related genes including PetE, PetF, PsbP, PsbQ, PsbW, and Psb28 were down-regulated under water stress, and exogenous Si could partially up-regulate their expressions.  These results suggest that silicon plays a role in the alleviation of water stress by modulating some photosynthesis-related genes and regulating the photochemical process, and thus promoting photosynthesis.
 
 
参考文献 | 相关文章 | 多维度评价
10. Physiological mechanisms of resistance to cold stress associated with 10 elite apple rootstocks
WANG Yan-xiu, HU Ya, CHEN Bai-hong, ZHU Yan-fang, Mohammed Mujitaba Dawuda, Sofkova Svetla
Journal of Integrative Agriculture    2018, 17 (04): 857-866.   DOI: 10.1016/S2095-3119(17)61760-X
摘要588)      PDF    收藏
A study was conducted in attempting to identify the cold-resistant apple rootstocks and to establish a comprehensive evaluation system.  In this study, 10 elite apple dwarfing rootstocks (GM256, JM7, M26, M7, SC1, SH1, SH38, SH6, M9, and T337) were employed for the experiment and the following parameters were investigated under different low temperature stress conditions (0, –15, –20, –25, –30, and –35°C): the changes of the relative electrical conductivity (REC), anthocyanin content, protein content, soluble sugar content, soluble starch content, proline content, malondialdehyde (MDA) content, superoxide dismutase (SOD) activity, and peroxidase (POD) activity of the dormant branches.  The inflection temperature that could represent the plant tissue semi-lethal temperature (LT50) was obtained by the measurements of REC.  The LT50 was used to evaluate eight other indices.  The results showed that there was no significant correlation between LT50 and POD activity as well as between the soluble sugar, protein and proline contents at 0 and –15°C.  Soluble starch content at 0 and –15°C and anthocyanin content at –15–(–30)°C were significantly but negatively correlated to the LT50 and the MDA content at 0–(–20)°C was significantly positively correlated to the LT50.  Statistical analysis based on principal component analysis and LT50 showed that cold resistant apple rootstocks in the decreasing order from high to low as GM256, SH6, SH38, SH1, SC1, M26, M7, JM7, T337, and M9.
参考文献 | 相关文章 | 多维度评价
11. Leaf area index based nitrogen diagnosis in irrigated lowland rice
LIU Xiao-jun, CAO Qiang, YUAN Zhao-feng, LIU Xia, WANG Xiao-ling, TIAN Yong-chao, CAO Wei-xing, ZHU Yan
Journal of Integrative Agriculture    2018, 17 (01): 111-121.   DOI: 10.1016/S2095-3119(17)61714-3
摘要735)      PDF    收藏
Leaf area index (LAI) is used for crop growth monitoring in agronomic research, and is promising to diagnose the nitrogen (N) status of crops.  This study was conducted to develop appropriate LAI-based N diagnostic models in irrigated lowland rice.  Four field experiments were carried out in Jiangsu Province of East China from 2009 to 2014.  Different N application rates and plant densities were used to generate contrasting conditions of N availability or population densities in rice.  LAI was determined by LI-3000, and estimated indirectly by LAI-2000 during vegetative growth period.  Group and individual plant characters (e.g., tiller number (TN) and plant height (H)) were investigated simultaneously.  Two N indicators of plant N accumulation (NA) and N nutrition index (NNI) were measured as well.  A calibration equation (LAI=1.7787LAI2000–0.8816, R2=0.870**) was developed for LAI-2000.  The linear regression analysis showed a significant relationship between NA and actual LAI (R2=0.863**).  For the NNI, the relative LAI (R2=0.808**) was a relatively unbiased variable in the regression than the LAI (R2=0.33**).  The results were used to formulate two LAI-based N diagnostic models for irrigated lowland rice (NA=29.778LAI–5.9397; NNI=0.7705RLAI+0.2764).  Finally, a simple LAI deterministic model was developed to estimate the actual LAI using the characters of TN and H (LAI=–0.3375(TH×H×0.01)2+3.665(TH×H×0.01)–1.8249, R2=0.875**).  With these models, the N status of rice can be diagnosed conveniently in the field.
参考文献 | 相关文章 | 多维度评价
12. Modeling curve dynamics and spatial geometry characteristics of rice leaves
ZHANG Yong-hui, TANG Liang, LIU Xiao-jun, LIU Lei-lei, CAO Wei-xing, ZHU Yan
Journal of Integrative Agriculture    2017, 16 (10): 2177-2190.   DOI: 10.1016/S2095-3119(16)61597-6
摘要696)      PDF    收藏
The objective of this work was to develop a dynamic model for describing leaf curves and a detailed spatial geometry model of the rice leaf (including sub-models for unexpanded leaf blades, expanded leaf blades, and leaf sheaths), and to realize three-dimensional (3D) dynamic visualization of rice leaves by combining relevant models.  Based on the experimental data of different cultivars and nitrogen (N) rates, the time-course spatial data of leaf curves on the main stem were collected during the rice development stage, then a dynamic model of the rice leaf curve was developed using quantitative modeling technology.  Further, a detailed 3D geometric model of rice leaves was built based on the spatial geometry technique and the non-uniform rational B-spline (NURBS) method.  Validating the rice leaf curve model with independent field experiment data showed that the average distances between observed and predicted curves were less than 0.89 and 1.20 cm at the tilling and jointing stages, respectively.  The proposed leaf curve model and leaf spatial geometry model together with the relevant previous models were used to simulate the spatial morphology and the color dynamics of a single leaf and of leaves on the rice plant after different growing days by 3D visualization technology.  The validation of the leaf curve model and the results of leaf 3D visualization indicated that our leaf curve model and leaf spatial geometry model could efficiently predict the dynamics of rice leaf spatial morphology during leaf development stages.  These results provide a technical support for related research on virtual rice.
参考文献 | 相关文章 | 多维度评价
13. Quantifying the spatial variation in the potential productivity and yield gap of winter wheat in China
ZHANG Shi-yuan, ZHANG Xiao-hu, QIU Xiao-lei, TANG Liang, ZHU Yan, CAO Wei-xing, LIU Lei-lei
Journal of Integrative Agriculture    2017, 16 (04): 845-857.   DOI: 10.1016/S2095-3119(16)61467-3
摘要957)      PDF    收藏
Despite the improvement in cultivar characters and management practices, large gaps between the attainable and potential yields still exist in winter wheat of China.  Quantifying the crop potential yield is essential for estimating the food production capacity and improving agricultural policies to ensure food security.  Gradually descending models and geographic information system (GIS) technology were employed to characterize the spatial variability of potential yields and yield gaps in winter wheat across the main production region of China.  The results showed that during 2000–2010, the average potential yield limited by thermal resource (YGT) was 23.2 Mg ha–1, with larger value in the northern area relative to the southern area.  The potential yield limited by the water supply (YGW) generally decreased from north to south, with an average value of 1.9 Mg ha–1 across the entire study region.  The highest YGW in the north sub-region (NS) implied that the irrigation and drainage conditions in this sub-region must be improved.  The averaged yield loss of winter wheat from nutrient deficiency (YGN) varied between 2.1 and 3.1 Mg ha–1 in the study area, which was greater than the yield loss caused by water limitation.  The potential decrease in yield from photo-thermal-water-nutrient-limited production to actual yield (YGO) was over 6.0 Mg ha–1, ranging from 4.9 to 8.3 Mg ha–1 across the entire study region, and it was more obvious in the southern area than in the northern area.  These findings suggest that across the main winter wheat production region, the highest yield gap was induced by thermal resources, followed by other factors, such as the level of farming technology, social policy and economic feasibility.  Furthermore, there are opportunities to narrow the yield gaps by making full use of climatic resources and developing a reasonable production plan for winter wheat crops.  Thus, meeting the challenges of food security and sustainability in the coming decades is possible but will require considerable changes in water and nutrient management and socio-economic policies.
参考文献 | 相关文章 | 多维度评价
14. PNPLA5-knockout rats induced by CRISPR/Cas9 exhibit abnormal bleeding and lipid level
LIU Yang, GAO Qian, ZHANG Xue, HUANG Lei, XU Kui, HU Yan-qing, LIU Lan, MU Yu-lian, LI Kui
Journal of Integrative Agriculture    2017, 16 (01): 169-180.   DOI: 10.1016/S2095-3119(16)61437-5
摘要829)      PDF    收藏
Patatin-like phospholipase domain containing 5 (PNPLA5) is a neotype neutral lipase with dual activity of anabolism and catabolism in vitro and in vivo, which has a low mRNA expression level in humans and mice.  PNPLA5, which is localized to lipid droplets and required for efficient autophagy by optimal initiation, has been speculated to possess triglyceride hydrolase activity, and has been associated with low density lipoprotein cholesterol (LDL-C).  Above all, PNPLA5 is a relatively new gene, which is reported less about its biological function research, especially the function research in the rats is still blank.  In this study, we examined the spatiotemporal expression profile of PNPLA5 and found that it was expressed at low levels in most organs of Sprague Dawley (SD) rats, but was present at very high levels in the skin and testes.  To further determine the biological function of PNPLA5 in mammals, we generated PNPLA5-knockout SD rats using the clustered regularly-interspaced short palindromic repeats (CRISPR)/Cas9 system.  PNPLA5-null rats were viable, but showed a variety of phenotypic abnormalities, such as abnormal bleeding, and varied hematobiochemical parameters including increased serum total cholesterol (TC), triglycerides and high density lipoprotein cholesterol (HDL-C) level, and reduced LDL-C level, compared with wild-type control rats.  These data are consistent with an important role for PNPLA5 in lipid metabolism, providing a new target gene and animal model for treatment of cardiovascular diseases in the future.
参考文献 | 相关文章 | 多维度评价
15. Modeling Dynamics of Leaf Color Based on RGB Value in Rice
ZHANG Yong-hui, TANG Liang, LIU Xiao-jun, LIU Lei-lei, CAO Wei-xing , ZHU Yan
Journal of Integrative Agriculture    2014, 13 (4): 749-759.   DOI: 10.1016/S2095-3119(13)60391-3
摘要2287)      PDF    收藏
This paper was to develop a model for simulating the leaf color changes in rice (Oryza sativa L.) based on RGB (red, green, and blue) values. Based on rice experiment data with different cultivars and nitrogen (N) rates, the time-course RGB values of each leaf on main stem were collected during the growth period in rice, and a model for simulating the dynamics of leaf color in rice was then developed using quantitative modeling technology. The results showed that the RGB values of leaf color gradually decreased from the initial values (light green) to the steady values (green) during the first stage, remained the steady values (green) during the second stage, then gradually increased to the final values (from green to yellow) during the third stage. The decreasing linear functions, constant functions and increasing linear functions were used to simulate the changes in RGB values of leaf color at the first, second and third stages with growing degree days (GDD), respectively; two cultivar parameters, MatRGB (leaf color matrix) and AR (a vector composed of the ratio of the cumulative GDD of each stage during color change process of leaf n to that during leaf n drawn under adequate N status), were introduced to quantify the genetic characters in RGB values of leaf color and in durations of different stages during leaf color change, respectively; FN (N impact factor) was used to quantify the effects of N levels on RGB values of leaf color and on durations of different stages during leaf color change; linear functions were applied to simulate the changes in leaf color along the leaf midvein direction during leaf development process. Validation of the models with the independent experiment dataset exhibited that the root mean square errors (RMSE) between the observed and simulated RGB values were among 8 to 13, the relative RMSE (RRMSE) were among 8 to 10%, the mean absolute differences (da) were among 3.85 to 6.90, and the ratio of da to the mean observation values (dap) were among 3.04 to 4.90%. In addition, the leaf color model was used to render the leaf color change over growth progress using the technology of visualization, with a good performance on predicting dynamic changes in rice leaf color. These results would provide a technical support for further developing virtual plant during rice growth and development.
参考文献 | 相关文章 | 多维度评价
16. Effects of Rest Grazing on Organic Carbon Storage in Stipa grandis Steppe in Inner Mongolia, China
LI Yu-jie1, 2, ZHU Yan1, ZHAO Jian-ning1, LI Gang1, WANG Hui1, LAI Xin1 and YANG Dian-lin1, 2
Journal of Integrative Agriculture    2014, 13 (3): 624-634.   DOI: 10.1016/S2095-3119(13)60720-0
摘要1813)      PDF    收藏
This study was aimed to evaluate the potential effects of rest grazing on organic carbon storage in Stipa grandis steppe of Inner Mongolia, China. Using potassium dichromate heating method, we analyzed the organic carbon storage of plant and soil in Stipa grandis steppe after rest grazing for 3, 6, and 9 yr. The results indicated that as the rest grazing ages prolonged, the biomass of aboveground parts, litter and belowground plant parts (roots) of the plant communities all increased, meanwhile the C content of the biomass increased with the rest grazing ages prolonging. For RG0, RG3a, RG6a, and RG9a, C storage in aboveground vegetation were 60.7, 76.9, 82.8 and 122.2 g C m-2, respectively; C storage of litter were 5.1, 5.8, 20.4 and 25.5 g C m-2, respectively; C storage of belowground roots (0-100 cm) were 475.2, 663.0, 1 115.0 and 1 867.3 g C m-2, respectively; C storage in 0-100 cm soil were 13.97, 15.76, 18.60 and 32.41 kg C m-2, respectively. As the rest grazing ages prolonged, the organic C storage in plant communities and soil increased. The C storage of belowground roots and soil organic C was mainly concentrated in 0-40 cm soil body. The increased soil organic C for RG3a accounted for 89.8% of the increased carbon in vegetation-soil system, 87.2% for RG6a, and 92.6% for RG9a. From the perspective of C sequestration cost, total cost for RG3a, RG6a, and RG9a were 2 903.4, 5 806.8 and 8 710.2 CNY ha-1, respectively. The cost reduced with the extension of rest grazing ages, 0.15 CNY kg-1 C for RG3a, 0.11 CNY kg-1 C for RG6a and 0.04 CNY kg-1 C for RG9a. From the growth characteristics of grassland plants, the spring was one of the two avoided grazing periods, timely rest grazing could effectively restore and update grassland vegetation, and was beneficial to the sustainable use of grassland. Organic C storage for RG9a was the highest, while the cost of C sequestration was the lowest. Therefore, spring rest grazing should be encouraged because it was proved to be a very efficient grassland use pattern.
参考文献 | 相关文章 | 多维度评价
17. Spatiotemporal Changes in Soil Nutrients: A Case Study in Taihu Region of China
LIU Lei-lei, ZHU Yan, LIU Xiao-jun, CAO Wei-xing, XU Mao, WANG Xu-kui , WANG En-li
Journal of Integrative Agriculture    2014, 13 (1): 187-194.   DOI: 10.1016/S2095-3119(13)60528-6
摘要1558)      PDF    收藏
The accurate assessment of the spatiotemporal changes in soil nutrients influenced by agricultural production provides the basis for development of management strategies to maintain soil fertility and balance soil nutrients. In this paper, we combined spatial measurements from 2 157 soil samples and geostatistical analysis to assess the spatiotemporal changes in soil organic carbon (SOC), total nitrogen (TN), available phosphorus (AP) and available potassium content (AK) from the first soil survey (in the 1980s) to the second soil survey (in the 2000s) in the Taihu region of Jiangsu Province in China. The results showed that average soil nutrients in three soil types all exhibited the increased levels in the 2000s (except for AK in the yellow brown soil). The standard deviation of soil nutrient contents increased (except for TN in the paddy soil). Agricultural production in the 20 years led to increases in SOC, TN, AP and AK by 74, 82, 89 and 65%, respectively, of the Taihu areas analyzed. From the 1980s to 2000s all the nugget/sill ratios of soil nutrients indices were between 25 and 75% (except for AK in the yellow brown soil in the 2000s), indicating moderate spatial dependence. The ratio of AP in the yellow brown soil in the 2000s was 88.74%, showing weak spatial dependence. The spatial correlation range values for SOC, TN, AP and AK in the 2000s all decreased. The main areas showing declines in SOC, TN and AP were in the northwest. For AK, the main region with declining levels was in the east and middle of western areas. Apparently, the increase in soil nutrients in the Taihu region can be mainly attributed to the large increase in fertilizer inputs, change in crop systems and enhanced residues management since the 1980s. Future emphasis should be placed on avoiding excess fertilizer inputs and balancing the effects of the fertilizers in soils.
参考文献 | 相关文章 | 多维度评价
18. A New Method to Determine Central Wavelength and Optimal Bandwidth for Predicting Plant Nitrogen Uptake in Winter Wheat
YAO Xin-feng, YAO Xia, TIAN Yong-chao, NI Jun, LIU Xiao-jun, CAO Wei-xing , ZHU Yan
Journal of Integrative Agriculture    2013, 12 (5): 788-802.   DOI: 10.1016/S2095-3119(13)60300-7
摘要1405)      PDF    收藏
Plant nitrogen (N) uptake is a good indicator of crop N status. In this study, a new method was designed to determine the central wavelength, optimal bandwidth and vegetation indices for predicting plant N uptake (g N m-2) in winter wheat (Triticum aestivum L.). The data were collected from the ground-based hyperspectral reflectance measurements in eight field experiments on winter wheat of different years, eco-sites, varieties, N rates, sowing dates, and densities. The plant N uptake index (PNUI) based on NDVI of 807 nm combined with 736 nm was selected as the optimal vegetation index, and a linear model was developed with R2 of 0.870 and RMSE of 1.546 g N m-2 for calibration, and R2 of 0.834, RMSE of 1.316 g N m-2, slope of 0.934, and intercept of 0.001 for validation. Then, the effect of the bandwidth of central wavelengths on model performance was determined based on the interaction between central wavelength and bandwidth expansion. The results indicated that the optimal bandwidth varies with the changes of the central wavelength and with the interaction between the two bands in one vegetation index. These findings are important for prediction and diagnosis of plant N uptake more precise and accurate in crop management.
参考文献 | 相关文章 | 多维度评价
19. Molecular Cloning and Characterization of Three Novel Genes Related to Fatty Acid Degradation and Their Responses to Abiotic Stresses in Gossypium hirsutum L.
DONG Jia, WEI Li-bin, HU Yan , GUO Wang-zhen
Journal of Integrative Agriculture    2013, 12 (4): 582-588.   DOI: 10.1016/S2095-3119(13)60275-0
摘要1514)      PDF    收藏
Fatty acid metabolism is responsible not only for oilseed metabolism but also for plant responses to abiotic stresses. In this study, three novel genes related to fatty acid degradation designated GhACX, Gh4CL, and GhMFP, respectively, were isolated from Gossypium hirsutum acc. TM-1. The phylogenetic analysis revealed that amino acid sequences of GhACX and GhMFP have the highest homology with those from Vitis vinifera, and Gh4CL has a closer genetic relationship with that from Camellia sinensis. Tissue- and organ-specific analysis showed that the three genes expressed widely in all the tested tissues, including ovules and fiber at different developing stages, with expressed preferentially in some organs. Among them, GhACX showed the most abundant transcripts in seeds at 25 d post anthesis (DPA), however, GhMFP and Gh4CL have the strongest expression level in ovules on the day of anthesis. Based on real-time quantitative RT-PCR, the three genes were differentially regulated when induced under wounding, methyl jasmonate (MeJA), cold, and abscisic acid (ABA) treatments. The characterization and expression pattern of three novel fatty acid degradation related genes will aid both to understand the roles of fatty acid degradation related genes as precursor in stress stimuli and to elucidate the physiological function in cotton oilseed metabolism.
参考文献 | 相关文章 | 多维度评价
20. Spatial and Temporal Characteristics of Rice Potential Productivity and Potential Yield Increment in Main Production Regions of China
JIANG Xiao-jian, TANG Liang, LIU Xiao-jun, CAO Wei-xing , ZHU Yan
Journal of Integrative Agriculture    2013, 12 (1): 45-56.   DOI: 10.1016/S2095-3119(13)60204-X
摘要1762)      PDF    收藏
The vast area and marked variation of China make it difficult to predict the impact of climate changes on rice productivity in different regions. Therefore, analyzing the spatial and temporal characteristics of rice potential productivity and predicting the possible yield increment in main rice production regions of China is important for guiding rice production and ensuring food security. Using meteorological data of main rice production regions from 1961 to 1970 (the 1960s) and from 1996 to 2005 (the 2000s) provided by 333 stations, the potential photosynthetic, photo-thermal and climatic productivities in rice crop of the 1960s and 2000s in main rice production regions of China were predicted, and differences in the spatial and temporal distribution characteristics between two decades were analyzed. Additionally, the potential yield increment based on the high yield target and actual yield of rice in the 2000s were predicted. Compared with the 1960s, the potential photosynthetic productivity of the 2000s was seen to have decreased by 5.40%, with rates in northeastern and southwestern China found to be lower than those in central and southern China. The potential photo-thermal productivity was generally seen to decrease (2.56%) throughout main rice production regions, decreasing most in central and southern China. However, an increase was seen in northeastern and southwestern China. The potential climatic productivity was observed to be lower (7.44%) in the 2000s compared to the 1960s, but increased in parts of central and southern China. The potential yield increment from the actual yield to high yield target in the 2000s were no more than 6×103 kg ha-1 and ranged from 6×103 to 12×103 kg ha-1 in most of the single- and double-cropping rice growing regions, respectively. The yield increasing potential from the high yield target to the potential photo-thermal productivity in 2000s were less than 10×103 kg ha-1 and ranged from 10×103 to 30×103 kg ha-1 in most of the single- and double-cropping rice growing regions, respectively. The potential yield increment contributed by irrigation was between 5×103 and 20×103 kg ha-1, and between 20×103 and 40×103 kg ha-1 in most of the single- and double-cropping rice growing regions, respectively. These findings suggested that the high yield could be optimized by making full use of climatic resources and through a reasonable management plan in rice crop.
参考文献 | 相关文章 | 多维度评价
21. Comparative Study on the Expression of Genes Involved in Carotenoid and ABA Biosynthetic Pathway in Response to Salt Stress in Tomato
DUAN Hui-kun, ZHU Yan, LI Wen-long, HUA Xue-jun, LIU Yong-xiu, DENG Xin
Journal of Integrative Agriculture    2012, 12 (7): 1093-1102.   DOI: 10.1016/S1671-2927(00)8634
摘要1360)      PDF    收藏
1 Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, P.R.China 2 Graduate University of Chinese Academy of Sciences, Beijing 100049, P.R.China 3 Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, P.R.China Carotenoid biosynthetic pathway produces not only pigments that protect photosynthetic system against photo-oxidative damage, but also precursors of abscisic acid, the major hormone regulates stress responses. To understand the response of carotenoid biosynthetic pathway to salt stress, the expression of the genes involved in carotenoid and ABA biosynthesis were compared in cultivated tomato Solanum lycopersicon cv. Moneymaker and its relative wild genotype S. pimpinellifolium (PI365967) together with the contents of carotenoids and ABA. The results showed that 11 of the 15 genes investigated were up-regulated and four unaltered in Moneymaker after 5 h of salt stress; whereas only four genes were up-regulated, four unaltered, and seven down-regulated in PI365967 after stress. Further comparison revealed that 11 salinity-induced genes were expressed significantly lower in Moneymaker than in PI365967 under normal condition, and 8 of them were induced to similar levels after salt stress. In consistence, ABA level was doubled in Moneymaker but kept consistent in PI365967 after salt stress, though the contents of neoxanthin, violaxanthin, β-carotene, lutein, and total carotenoids were kept unchanged in both species. Since it is known that PI365967 is more tolerant to salt stress than Moneymaker, we proposed that the constitutive high level of carotenoid and ABA biosynthetic pathway under normal growth condition could be benefit to PI365967 for establishing the early response to salt stress. In addition, CrtR-b1 and CrtR-b2 that encode β-carotenoid hydroxylases were the only genes in carotenoid biosynthetic pathway that were up-regulated by salt stress in both species. The CrtR-b2 gene was cloned from both species and no essential difference was found in the encoded amino acid sequences. Transformation of CrtR-b2 to tobacco improved the seed germination under salt stress condition, indicating that the hydrolysis of β-carotenoid is the target of transcriptional regulation of the carotenoid biosynthesis in both tomato cultivar and wild relative.
参考文献 | 相关文章 | 多维度评价
22. Common Spectral Bands and Optimum Vegetation Indices for Monitoring Leaf Nitrogen Accumulation in Rice andWheat
WANG Wei, YAO Xia, TIAN Yong-chao, LIU Xiao-jun, NI Jun, CAO Wei-xing , ZHU Yan
Journal of Integrative Agriculture    2012, 12 (12): 2001-2012.   DOI: 10.1016/S1671-2927(00)8737
摘要1342)      PDF    收藏
Real-time monitoring of nitrogen status in rice and wheat plant is of significant importance for nitrogen diagnosis, fertilization recommendation, and productivity prediction. With 11 field experiments involving different cultivars, nitrogen rates, and water regimes, time-course measurements were taken of canopy hyperspectral reflectance between 350-2 500 nm and leaf nitrogen accumulation (LNA) in rice and wheat. A new spectral analysis method through the consideration of characteristics of canopy components and plant growth status varied with phenological growth stages was designed to explore the common central bands in rice and wheat. Comprehensive analyses were made on the quantitative relationships of LNA to soil adjusted vegetation index (SAVI) and ratio vegetation index (RVI) composed of any two bands between 350-2 500 nm in rice and wheat. The results showed that the ranges of indicative spectral reflectance were largely located in 770-913 and 729-742 nm in both rice and wheat. The optimum spectral vegetation index for estimating LNA was SAVI (R822,R738) during the early-mid period (from jointing to booting), and it was RVI (R822,R738) during the mid-late period (from heading to filling) with the common central bands of 822 and 738 nm in rice and wheat. Comparison of the present spectral vegetation indices with previously reported vegetation indices gave a satisfactory performance in estimating LNA. It is concluded that the spectral bands of 822 and 738 nm can be used as common reflectance indicators for monitoring leaf nitrogen accumulation in rice and wheat.
参考文献 | 相关文章 | 多维度评价
23. Cloning One CIPK Gene from a Thermo-Sensitive Genic Self-Incompatible Line in Maize Expressing Under Different Temperatures
LIN Xing-e, JI Hong-qing, NIU Jun-hai, HU Yan-min, FU Zhong-jun, LIU Zong-hua, TANG Ji-hua
Journal of Integrative Agriculture    2011, 10 (6): 813-819.   DOI: 10.1016/S1671-2927(11)60066-7
摘要3137)      PDF    收藏
A calcineurin B-like protein-interacting protein kinases (CIPK) gene was cloned (EU 424058) from a thermo-sensitive genic self-incompatibility (TSGI) line, HE97, in maize, which was selected for suppression subtractive hybridization (SSH) library of the self-incompatible and self-compatible silks of the TSGI line under different temperatures. The full-length cDNA of the candidate CIPK-like gene consisted of 1 918 nucleotides and contained a 1 332-bp open reading frame in maize. Real-time PCR indicated that the candidate CIPK-like gene was highly expressed in the self-incompatible pollen of the TGSI line, and promoted elevated levels of calcium (Ca2+). High Ca2+ concentrations in the pollen strongly inhibit pollen tube formation in silk of the same plant, thus inducing self-incompatibility (SI) under high temperature. These results implied that the CIPKs-like gene would play an important role in the regulation of HE97 characteristics under different temperatures, perhaps acting as a secondary messenger in the expression of SI in the TGSI line in maize.
参考文献 | 相关文章 | 多维度评价
24. 现代育种选择基因ZmMYC2调控玉米生长和抗逆基因表达的研究
Shuai Ma, Xiangyu Lu, Bo Zhou, Jiameng Zhu, Qianhe Zhang, Suzhen Li, Xiaoqing Liu, Wenzhu Yang, Chunhui Li, Yongxiang Li, Yu Li, Rumei Chen, Xiaojin Zhou, Tianyu Wang
Journal of Integrative Agriculture    DOI: 10.1016/j.jia.2024.12.020
录用日期: 2024-12-19