中国农业科学 ›› 2024, Vol. 57 ›› Issue (9): 1820-1832.doi: 10.3864/j.issn.0578-1752.2024.09.015
陈源(), 崔鹏飞, 施建忠, 张元成, 于晴晴, 颜成, 张亚萍, 王丛丛, 张洁, 王燕, 邓国华(), 陈化兰
收稿日期:
2023-10-27
接受日期:
2023-12-24
出版日期:
2024-05-01
发布日期:
2024-05-09
通信作者:
联系方式:
陈源,E-mail:charlesyg1@163.com。
基金资助:
CHEN Yuan(), CUI PengFei, SHI JianZhong, ZHANG YuanCheng, YU QingQing, YAN Cheng, ZHANG YaPing, WANG CongCong, ZHANG Jie, WANG Yan, DENG GuoHua(), CHEN HuaLan
Received:
2023-10-27
Accepted:
2023-12-24
Published:
2024-05-01
Online:
2024-05-09
摘要:
【背景】H6亚型禽流感病毒(avian influenza virus,AIV)广泛流行于我国南方地区,是我国家禽中最常见AIV之一。H6N1亚型AIV频繁地与其他野鸟源毒株重配,并且可以作为供体为高致病性AIV提供内部基因片段,产生新型重组病毒,进而威胁人类健康。【目的】通过对我国H6N1亚型AIV的演化动态及其相关生物学特性分析研究,为我国禽流感的综合防控提供数据支持。【方法】采集2019—2022年我国25个省(直辖市、自治区)的活禽交易市场及养殖场家禽喉和泄殖腔拭子,通过接种鸡胚分离到7株H6N1亚型AIVs并对其进行全基因组测序,分析其遗传演化特征、受体结合特性及其对SPF鸡和BALB/c小鼠的感染性。【结果】遗传演化分析表明,7株病毒的基因与分离于北美及东南亚地区的野鸟源病毒基因同源性较高,基因来源复杂,具有明显的遗传多样性。贝叶斯演化分析表明,H6亚型AIV HA基因曾发生过多次的跨洲际传播,欧亚谱系病毒在北美地区也有着较长时间流行。1株病毒HA基因与北美地区毒株基因高度同源,根据贝叶斯演化分析结果,推测该病毒在野鸟体内经历了复杂的基因重配后形成,后经野鸟传入我国。特殊氨基酸位点分析结果显示,病毒HA蛋白裂解位点序列均为PQIETR↓GLF,符合低致病性AIV特征;此外,另有1株病毒的NP蛋白发生Y52H突变,据报道,该突变对AIV获得抵抗人干扰素刺激基因BTN3A3的能力起到关键作用。受体结合特性分析表明,部分毒株具有双受体结合特性,但结合人源受体能力弱于结合禽源受体能力。病毒对SPF鸡的感染性试验表明,鸡感染A/chicken/Jiangxi/S40445/2019(H6N1)后能通过呼吸道及消化道排毒,并且病毒可在鸡群内通过接触传播。鸡感染A/duck/Jiangxi/S10941/2019(H6N1)后仅有少数鸡通过呼吸道排毒,病毒无法在鸡群间通过接触传播。BALB/c小鼠的感染性试验表明,H6N1亚型AIV无需提前适应便可在小鼠呼吸道内有效复制,但对小鼠仍呈低致病力。【结论】2019—2022年分离于我国的H6N1亚型AIV基因大部分来源于野鸟源病毒,候鸟可经东亚-澳大利亚迁徙路线将病毒传入我国;部分病毒能够结合人源唾液酸受体并在小鼠呼吸道内有效复制,表明该亚型病毒对公共卫生安全构成潜在威胁。
陈源, 崔鹏飞, 施建忠, 张元成, 于晴晴, 颜成, 张亚萍, 王丛丛, 张洁, 王燕, 邓国华, 陈化兰. 2019-2022年中国H6N1亚型禽流感病毒的生物学特性分析[J]. 中国农业科学, 2024, 57(9): 1820-1832.
CHEN Yuan, CUI PengFei, SHI JianZhong, ZHANG YuanCheng, YU QingQing, YAN Cheng, ZHANG YaPing, WANG CongCong, ZHANG Jie, WANG Yan, DENG GuoHua, CHEN HuaLan. Biological Characteristics of H6N1 Subtype Avian Influenza Virus from 2019 to 2022 in China[J]. Scientia Agricultura Sinica, 2024, 57(9): 1820-1832.
表1
H6N1亚型AIVs信息"
毒株名称 Virus name | 宿主 Host | 分离地点 Location | 省份 Province | 分离年份 Year |
---|---|---|---|---|
A/duck/Hubei/S4186/2019 (H6N1) ( DK/HuB/186/19) | 鸭Duck | 养殖场Farm | 湖北Hubei | 2019 |
A/duck/Jiangxi/S10941/2019 (H6N1) ( DK/JX/941/19) | 鸭Duck | 养殖场Farm | 江西Jiangxi | 2019 |
A/chicken/Jiangxi/S40445/2019 (H6N1) ( CK/JX/445/19) | 鸡Chicken | 养殖场Farm | 江西Jiangxi | 2019 |
A/duck/Fujian/S1048/2020 (H6N1) ( DK/FJ/48/20) | 鸭Duck | 市场Market | 福建Fujian | 2020 |
A/duck/Hunan/S10268/2020 (H6N1) ( DK/HuN/268/20) | 鸭Duck | 养殖场Farm | 湖南Hunan | 2020 |
A/duck/Guizhou/S4674/2021 (H6N1) ( DK/GZ/674/21) | 鸭Duck | 市场Market | 贵州Guizhou | 2021 |
A/duck/Hunan/S40963/2021 (H6N1) ( DK/HuN/963/21) | 鸭Duck | 养殖场Farm | 湖南Hunan | 2021 |
表2
7株H6N1亚型AIVs各基因节段同源性的分析"
病毒 Virus | 基因 Gene | 核苷酸相似性最高的病毒 Virus with highest identity | 相似性 Identity | 片段编号 Segment ID |
---|---|---|---|---|
DK/HuB/186/19 | HA | A/mallard/Anhui/2-549/2019 (H6N1) | 99% | EPI1743652 |
NA | A/Anser brachyrhynchus/South Korea/42/2019 (H6N1) | 99% | EPI2395430 | |
PB2 | A/mallard/Anhui/2-549/2019 (H6N1) | 99% | EPI1743649 | |
PB1 | A/wild bird/Hunan/01.18 DTHBDF33/2019(H9N2) | 99% | EPI1626428 | |
PA | A/mallard/Korea/H37-1/2019 (H10N3) | 98% | EPI1752410 | |
NP | A/wild bird /Shandong/11452/2019 (H9N2) | 99% | EPI1896647 | |
M | A/White-fronted Goose/South Korea/KNU2021-18/2021 (H6N2) | 99% | EPI2153859 | |
NS | A/common teal/Shanghai/JDS110203/2019 (H12N8) | 99% | EPI1767944 | |
DK/JX/941/19 | HA | A/northern pintail/Alaska/UGAI17-4733/2017 (H6N5) | 99% | EPI1774620 |
NA | A/White-fronted goose/South Korea/KNU2019-37/2019 (H1N1) | 99% | EPI1902856 | |
PB2 | A/Anser fabalis/South Korea/50/2019 (H6N2) | 99% | EPI2395451 | |
PB1 | A/spot-billed duck/South Korea/JB32-105/2019 (H4N2) | 99% | EPI1903725 | |
PA | A/duck/Mongolia/543/2015 (H4N6) | 99% | EPI704413 | |
NP | A/pink-footed goose/Korea/H3473/2015 (H5N3) | 99% | EPI1513819 | |
M | A/mallard/Omsk region/45/2020 (H5N2) | 99% | EPI1847610 | |
NS | A/duck/Mongolia/MN18-14/2018 (H3N8) | 100% | EPI1903627 | |
CK/JX/445/19 | HA | A/mallard/Anhui/2-549/2019 (H6N1) | 99% | EPI1743652 |
NA | A/Anser brachyrhynchus/South Korea/42/2019 (H6N1) | 99% | EPI2395430 | |
PB2 | A/duck/Mongolia/826/2019 (H4N6) | 99% | EPI1777578 | |
PB1 | A/duck/Mongolia/820/2019 (H4N2) | 99% | EPI1777571 | |
PA | A/environment/Korea/W437/2012 (H7N7) | 98% | EPI837838 | |
NP | A/mallard/Anhui/3-617/2019 (H6N1) | 98% | EPI1743661 | |
M | A/wild bird/Korea/H2542/2015 (H10N7) | 99% | EPI1752361 | |
NS | A/duck/Mongolia/518/2015 (H10N3) | 99% | EPI704566 | |
DK/FJ/48/20 | HA | A/mallard/Anhui/2-549/2019 (H6N1) | 99% | EPI1743652 |
NA | A/Anser brachyrhynchus/South Korea/42/2019 (H6N1) | 99% | EPI2395430 | |
PB2 | A/mallard/Anhui/2-549/2019 (H6N1) | 99% | EPI1743649 | |
PB1 | A/duck/Mongolia/217/2018 (H3N8) | 98% | EPI1818050 | |
PA | A/little curlew/Liaoning/dandong142/2019 (H7N4) | 98% | EPI1738381 | |
NP | A/wild bird /Shandong/11452/2019 (H9N2) | 99% | EPI1896647 | |
M | A/environment/Kagoshima/KU-G3/2019 (H3N8) | 99% | EPI2073561 | |
NS | A/common teal/Shanghai/JDS110203/2019 (H12N8) | 99% | EPI1767944 | |
DK/HuN/268/20 | HA | A/mallard/Anhui/2-549/2019 (H6N1) | 99% | EPI1743652 |
NA | A/Anser brachyrhynchus/South Korea/42/2019 (H6N1) | 99% | EPI2395430 | |
PB2 | A/mallard/Anhui/2-549/2019 (H6N1) | 99% | EPI1743649 | |
PB1 | A/wild duck/Shandong/W11397/2019 (H3N8) | 99% | EPI2245882 | |
PA | A/Gadwall/Buryatia/2206/2019 (H12N5) | 99% | EPI1638480 | |
NP | A/mallard/Anhui/2-549/2019 (H6N1) | 99% | EPI1743645 | |
M | A/environment/Japan/KU-C10/2020 (H3N8) | 99% | EPI2596493 | |
NS | A/common teal/Shanghai/JDS110203/2019 (H12N8) | 99% | EPI1767944 | |
DK/GZ/674/21 | HA | A/Anser albifrons/South Korea/50/2022 (H6N2) | 99% | EPI2395103 |
NA | A/Anser albifrons/South Korea/64/2022 (H6N1) | 99% | EPI2395393 | |
PB2 | A/Mallard/South Korea/KNU2021-49/2021 (H7N7) | 99% | EPI2153561 | |
PB1 | A/wild duck/Shandong/W11397/2019 (H3N8) | 99% | EPI2245882 | |
PA | A/enviroment/Shanghai/CM20659/2020(H4N2) | 99% | EPI2600926 | |
NP | A/Common Teal/South Korea/KNU2021-22/2021 (H8N4) | 99% | EPI2153541 | |
M | A/mallard/South Korea/20X-20/2021 (H7N9) | 99% | EPI1930790 | |
NS | A/environment/Kagoshima/KU-3c/2019 (H11N2) | 99% | EPI2075052 | |
DK/HuN/963/21 | HA | A/Common_Teal/Buryatia/73i/2019 (H6N1) | 98% | EPI1657043 |
NA | A/Mallard/South Korea/KNU2021-9/2021 (H1N1) | 98% | EPI2153457 | |
PB2 | A/Mallard/South Korea/KNU2021-49/2021 (H7N7) | 99% | EPI2153561 | |
PB1 | A/duck/Mongolia/543/2015 (H4N6) | 98% | EPI704412 | |
PA | A/Wild Duck/South Korea/KNU2020-101/2020 (H9N2) | 99% | EPI1931705 | |
NP | A/wild duck/Shandong/W6271/2019 (H3N8) | 99% | EPI2245829 | |
M | A/environment/Japan/KU-C10/2020 (H3N8) | 99% | EPI2596493 | |
NS | A/environment/Kagoshima/KU-3c/2019 (H11N2) | 99% | EPI2075052 |
表3
DK/JX/941/19演化关系推断"
基因 Gene | 最近亲缘关系毒株 Most closely related strain | 最近共同祖先时间(95%置信区间) tMRCA (95% HPD interval) | 后验概率 Posterior probability |
---|---|---|---|
PB2 | Waterfowl strains (South Korea and China) | 2018.3 (2017.3—2018.10) | 0.9976 |
PB1 | Waterfowl H4N2 (South Korea) | 2017.6 (2016.6—2018.6) | 0.9993 |
PA | Waterfowl H4N6 (South Korea) | 2018.4 (2017.1—2019.1) | 0.2914 |
HA | Waterfowl, wild bird strains (South Korea and China) | 2017.11 (2017.7—2018.4) | 0.9752 |
NP | Duck H3N2 (Vietnam) | 2016.5 (2013.3—2018.7) | 0.9167 |
NA | Waterfowl H1N1 (South Korea) | 2018.12 (2018.6—2019.2) | 0.9981 |
M | Waterfowl strains (Siberia of Russia) | 2017.11 (2016.11—2018.7) | 0.2385 |
NS | Duck H4N6 (Mongolia) | 2019.1 (2018.9—2019.2) | 0.6487 |
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