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Histone H3K27me3 methylation regulates the expression of secreted proteins distributed at fast-evolving regions through transcriptional repression of transposable elements
XIE Jia-hui, TANG Wei, LU Guo-dong, HONG Yong-he, ZHONG Zhen-hui, WANG Zong-hua, ZHENG Hua-kun
2023, 22 (10): 3059-3068.   DOI: 10.1016/j.jia.2023.01.011
Abstract228)      PDF in ScienceDirect      

The fine-tuned expression dynamics of the effector genes are pivotal for the transition from vegetative growth to host colonization of pathogenic filamentous fungi.  However, mechanisms underlying the dynamic regulation of these genes remain largely unknown.  Here, through comparative transcriptome and chromatin immunoprecipitation sequencing (ChIP-seq) analyses of the methyltransferase PoKmt6 in rice blast fungus Pyricularia oryzae (syn. Magnaporthe oryzae), we found that PoKmt6-mediated H3K27me3 deposition was enriched mainly at fast-evolving regions and contributed to the silencing of a subset of secreted proteins (SP) and transposable element (TE) families during the vegetative growth of Poryzae.  Intriguingly, we observed that a group of SP genes, which were depleted of H3K27me3 modification, could also be silenced via the H3K27me3-mediated repression of the nearby TEs.  In conclusion, our results indicate that H3K27me3 modification mediated by PoKmt6 regulates the expression of some SP genes in fast-evolving regions through the suppression of nearby TEs.

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Evolutionary analysis of plant jacalin-related lectins (JRLs) family and expression of rice JRLs in response to Magnaporthe oryzae
HAN Yi-juan, ZHONG Zhen-hui, SONG Lin-lin, Olsson Stefan, WANG Zong-hua, LU Guo-dong
2018, 17 (06): 1252-1267.   DOI: 10.1016/S2095-3119(17)61809-4
Abstract482)      PDF in ScienceDirect      
Jacalin-related lectins (JRLs) are widely distributed carbohydrate-binding proteins in the plant kingdom, which play key roles in development and pathogen defense.  In this study, we profiled evolutionary trajectory of JRLs family in 30 plant species and identified domain diversification and recombination leading to different responsive patterns of JRLs in rice during defense against rice blast.  All of 30 plant species analyzed in our study have two types of JRLs by containing either a single jacalin or repeated jacalin domains, while chimeric jacalins exist in more than half of the species, especially in the Poaceae family.  Moreover, Poaceae species have evolved two types of unique chimeric JRLs by fusing the jacalin domain(s) with dirigent or NB_ARC domain, some of which positively regulate plant immunity.  Seven Poaceae-specific JRLs are found in the rice genome.  We further found expression of rice JRLs, including four Poaceae-specific JRLs, are induced by Magnaporthe oryzae infections at either early or late infection stages.  Overall, the results present the evolutionary trajectory of JRLs in plant and highlight essential roles of Poaceae specific JRLs against pathogen attacks in rice.
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