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Silencing the SLB3 transcription factor gene decreases drought stress tolerance in tomato
WANG Zi-yu, bAO Yu-fang, PEI Tong, WU Tai-ru, DU Xu, HE Meng-xi, WANG Yue, LIU Qi-feng, YANG Huan-huan, JIANG Jing-bin, ZHANG He, LI Jing-fu, ZHAO Ting-ting, XU Xiang-yang
2020, 19 (
11
): 2699-2708. DOI:
10.1016/S2095-3119(20)63350-0
Abstract
(
128
)
PDF in ScienceDirect
BRI1-EMS-SUPPRESSOR 1 (BES1) transcription factor is closely associated with the brassinosteroid (BR) signaling pathway and plays an important role in plant growth and development.
SLB3
is a member of BES1 transcription factor family and its expression was previously shown to increase significantly in tomato seedlings under drought stress. In the present study,we used virus-induced gene silencing (VIGS) technology to downregulate
SLB3
expression to reveal the function of the
SLB3
gene under drought stress further. The downregulated expression of
SLB3
weakened the drought tolerance of the plants appeared earlier wilting and higher accumulation of H
2
O
2
and O
2
–
·, decreased superoxide dismutase (SOD) activity, and increased proline (PRO) and malondialdehyde (MDA) contents and peroxidase (POD) activity. Quantitative real-time PCR (qRT-PCR) analysis of BR-related genes revealed that the expression of
SlCPD
,
SlDWARF
and BIN2-related genes was significantly upregulated in
SLB3
-silenced seedlings under drought stress, but that the expression of TCH4-related genes was downregulated. These results showed that silencing the
SLB3
gene reduced the drought resistance of tomato plants and had an impact on the BR signaling transduction which may be probably responsible for the variation in drought resistance of the tomato plants.
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Assignment of unanchored scaffolds in genome of
Brassica napus
by RNA-seq analysis in a complete set of Brassica rapa-
Brassica oleracea
monosomic addition lines
HUO Dong-ao, ZHU Bin, TIAN Gui-fu, DU Xu-ye, GUO Juan, CAI Meng-xian
2019, 18 (
7
): 1541-1546. DOI:
10.1016/S2095-3119(19)62635-3
Abstract
(
217
)
PDF in ScienceDirect
The economically valuable oil crop
Brassica napus
(AACC, 2n=38), which arose from interspecific hybridization between the diploid ancestors Brassica rapa (AA, 2n=20) and Brassica oleracea (CC, 2n=18), has a complex genome. More than 10% of the assembled sequences, most of which belong to the C subgenome, have not been anchored to the corresponding chromosome. Previously, a complete set of monosomic alien addition lines (MAALs, C1–C9) with each of the nine C-subgenome chromosomes added to the extracted A subgenome was obtained from the allotetraploid
B. napus
donor Oro, after the ancestral B. rapa (RBR Oro) genome was restored. These MAALs effectively reduced the complexity of the
B. napus
genome. Here, we determined the expression values of genes on unanchored scaffolds in the MAALs and RBR Oro. Then, multiple comparisons of these gene expression values were used to determine the affiliations of the non-anchored scaffolds on which the genes were located. In total, 54.68% (44.11 Mb) of the 80.67 Mb of non-anchored scaffolds belonging to the C subgenome were assigned to corresponding C chromosomes. This work highlights the potential value of these MAALs in improving the genome quality of
B. napus
.
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Functional analysis of a wheat pleiotropic drug resistance gene involved in Fusarium head blight resistance
WANG Gui-ping, HOU Wen-qian, ZHANG Lei, WU Hong-yan, ZHAO Lan-fei, DU Xu-ye, MA Xin, LI An-fei, WANG Hong-wei, KONG Ling-rang
2016, 15 (
10
): 2215-2227. DOI:
10.1016/S2095-3119(16)61362-X
Abstract
(
1708
)
PDF in ScienceDirect
The pleiotropic drug resistance (PDR) sub-family of adenosine triphosphate (ATP)-binding cassette (ABC) transporter had been reported to participate in diverse biological processes of plant. In this study, we cloned three novel PDR genes in Fusarium head blight (FHB) resistant wheat cultivar Ning 7840, which were located on wheat chromosomes 6A, 6B and 6D. In phylogeny, these genes were members of cluster I together with
AePDR7
and
BdPDR7
. Subcellular localization analysis showed that
TaPDR7
was expressed on the plasmalemma. The quantitative real time PCR (RT-PCR) analysis showed that this gene and its probable orthologues in chromosomes 6B and 6D were both up-regulated sharply at 48 h after infected by
Fusarium graminearum
and
trichothecene deoxynivalenol
(DON) in spike. When knocking down the transcripts of all
TaPDR7
members by barely stripe mosaic virus-induced gene silencing (BSMV-VIGS) system, it could promote the
F. graminearum
hyphae growth and made larger pathogen inoculation points in Ning 7840, which suggested that
TaPDR7
might play an important role in response to
F. graminearum
. Although salicylic acid (SA), methyl jasmonate (MeJA) and abscisic acid (ABA) had been reported to possibly regulate wheat FHB resistance, here, we found that the three members of
TaPDR7
were negatively regulated by these three hormones but positively regulated by indoleacetic acid (IAA).
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Cloning and characterization of a novel UDP-glycosyltransferase gene induced by DON from wheat
MA Xin, DU Xu-ye, LIU Guo-juan, YANG Zai-dong, HOU Wen-qian, WANG Hong-wei, FENG De-shun
2015, 14 (
5
): 830-838. DOI:
10.1016/S2095-3119(14)60857-1
Abstract
(
2424
)
PDF in ScienceDirect
Fusarium head blight (FHB), caused primarily by Fusarium graminearum, is a destructive disease of wheat throughout the world. However, the mechanisms of host resistance to FHB are still largely unclear. Deoxynivalenol (DON) produced by F. graminearum which enhances the pathogen to spread could be converted into inactive form D3G by UDP-glycosyltransferases (UGTs). A DON responsive UGT gene, designated as TaUGT4, was first cloned from wheat in this study. The putative open reading frame (ORF) of TaUGT4 was 1 386 bp, encoding 461 amino acids protein. TaUGT4 was placed on chromosome 2D using a set of nulli-tetrasomic lines of wheat cultivar Chinese Spring (CS). When fused with eGFP at C terminal, TaUGT4 was shown to localize in cytoplasm of the transformed tobacco cells. The transcriptional analysis revealed that TaUGT4 was strongly induced by F. graminearum or DON in both of FHB-resistant cultivar Sumai 3 and susceptible cultivar Kenong 199, especially in Sumai 3 under DON treatment. Similar increase of TaUGT4 expression was observed in Sumai 3 and Kenong 199 in response to salicylic acid (SA) treatment. But interestingly, the transcripts level of TaUGT4 in Sumai 3 showed significantly higher than that in Kenong 199 after treated with methyl jasmonate (MeJA). According to the expression patterns, TaUGT4 might lead to different effects between FHB-resistant genotype and susceptible genotype in the process against F. graminearum inoculation. It had also been discussed in this paper that JA signaling pathway might play a significant role in the resistance against F. graminearum compared to SA signaling pathway.
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Association analysis of grain traits with SSR markers between Aegilops tauschii and hexaploid wheat (Triticum aestivum L.)
ZHAO Jing-lan, WANG Hong-wei, ZHANG Xiao-cun, DU Xu-ye, LI An-fei, KONG Ling-rang
2015, 14 (
10
): 1936-1948. DOI:
10.1016/S2095-3119(15)61070-X
Abstract
(
1348
)
PDF in ScienceDirect
Seven important grain traits, including grain length (GL), grain width (GW), grain perimeter (GP), grain area (GA), grain length/width ratio (GLW), roundness (GR), and thousand-grain weight (TGW), were analyzed using a set of 139 simple sequence repeat (SSR) markers in 130 hexaploid wheat varieties and 193 Aegilops tauschii accessions worldwide. In total, 1 612 alleles in Ae. tauschii and 1 360 alleles in hexaploid wheat (Triticum aestivum L.) were detected throughout the D genome. 197 marker-trait associations in Ae. tauschii were identified with 58 different SSR loci in 3 environments, and the average phenotypic variation value (R2) ranged from 0.68 to 15.12%. In contrast, 208 marker-trait associations were identified in wheat with 66 different SSR markers in 4 environments and the average phenotypic R2 ranged from 0.90 to 19.92%. Further analysis indicated that there are 6 common SSR loci present in both Ae. tauschii and hexaploid wheat, which are significantly associated with the 5 investigated grain traits (i.e., GA, GP, GR, GL, and TGW) and in total, 16 alleles derived from the 6 aforementioned SSR loci were shared by Ae. tauschii and hexaploid wheat. These preliminary data suggest the existence of common alleles may explain the evolutionary process and the selection between Ae. tauschii and hexaploid wheat. Furthermore, the genetic differentiation of grain shape and thousand-grain weight were observed in the evolutionary developmental process from Ae. tauschii to hexaploid wheat.
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Effects of High-Quality Aromatic Rice Varieties on the Fitness of the Striped Stem Borer, Chilo suppressalis (Walker) in Central China
DU Xue-zhu, WANG Yong, CHEN Long-jia, PENG Chuan-hua, MA Wei-hua, LEI Chao-liang
2013, 12 (
7
): 1208-1214. DOI:
10.1016/S2095-3119(13)60446-3
Abstract
(
1944
)
PDF in ScienceDirect
The striped stem borer (SSB), Chilo suppressalis (Walker) (Lepidoptera: Pyralidae), is a major pest of rice in China. Variation in host-plant quality may affect the body size of herbivorous insects, which in turn, can determine their lifehistory parameters such as survival, fecundity and fitness. In this study, we tested the effects of high-quality aromatic rice varieties on the fitness of SSB in China. Results showed that 1st instar larvae had higher penetrating rates and survival rates on the high-quality aromatic rice varieties (EX-1 and WX-988) than that on the non-aromatic rice varieties (EZ-5 and LYP-9). In addition, shorter developmental periods, greater female pupal weights and higher of other life-history parameters (hatching rate, pupation rate, eclosion rate and increase index) were found on the high-quality aromatic rice varieties, although only female pupal weight showed a significant difference between the two varieties. The highest dead heart rate was found on the aromatic rice variety of EX-1. These results indicate that SSB sustains a lower fitness cost when consuming the high-quality aromatic rice varieties (EX-1 and WX-988) than on the non-aromatic rice varieties (EZ-5 and LYP-9) in Central China.
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