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Modeling leaf color dynamics of winter wheat in relation to growth stages and nitrogen rates 
ZHANG Yong-hui, YANG Yu-bin, CHEN Chun-lei, ZHANG Kui-ting, JIANG Hai-yan, CAO Wei-xing, ZHU Yan
2022, 21 (1): 60-69.   DOI: 10.1016/S2095-3119(20)63319-6
Abstract254)      PDF in ScienceDirect      
The objective of this work was to develop a model for simulating the leaf color dynamics of winter wheat in relation to crop growth stages and leaf positions under different nitrogen (N) rates.  RGB (red, green and blue) data of each main stem leaf were collected throughout two crop growing seasons for two winter wheat cultivars under different N rates.  A color model for simulating the leaf color dynamics of winter wheat was developed using the collected RGB values.  The results indicated that leaf color changes went through three distinct stages, including early development stage (ES), early maturity stage (MS) and early senescence stage (SS), with respective color characteristics of light green, dark green and yellow for the three stages.  In the ES stage, the R and G colors gradually decreased from their initial values to steady values, but the B value generally remained unchanged.  RGB values remained steady in the MS, but all three gradually increased to steady values in the SS.  Different linear functions were used to simulate the dynamics of RGB values in time and space.  A cultivar parameter of leaf color matrix (MRGB) and a nitrogen impact factor (FN) were added to the color model to quantify their respective effects.  The model was validated with an independent experimental dataset.  RMSEs (root mean square errors) between the observed and simulated RGB values ranged between 7.0 and 10.0, and relative RMSEs (RRMSEs) ranged between 7 and 9%.  In addition, the model was used to render wheat leaves in three-dimensional space (3D).  The 3D visualizations of leaves were in good agreement with the observed leaf color dynamics in winter wheat.  The developed color model could provide a solid foundation for simulating dynamic crop growth and development in space and time. 

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Collision detection of virtual plant based on bounding volume hierarchy: A case study on virtual wheat
TANG Liang, SONG Wei-guo, HOU Tian-cheng, LIU Lei-lei, CAO Wei-xing, ZHU Yan
2018, 17 (2): 306-314.   DOI: 10.1016/S2095-3119(17)61769-6
Abstract802)      PDF in ScienceDirect      
Visualization of simulated crop growth and development is of significant interest to crop research and production.  This study aims to address the phenomenon of organs cross-drawing by developing a method of collision detection for improving vivid 3D visualizations of virtual wheat crops.  First, the triangular data of leaves are generated with the tessellation of non-uniform rational B-splines surfaces.  Second, the bounding volumes (BVs) and bounding volume hierarchies (BVHs) of leaves are constructed based on the leaf morphological characteristics and the collision detection of two leaves are performed using the Separating Axis Theorem.  Third, the detecting effect of the above method is compared with the methods of traditional BVHs, Axis-Aligned Bounding Box (AABB) tree, and Oriented Bounding Box (OBB) tree.  Finally, the BVs of other organs (ear, stem, and leaf sheath) in virtual wheat plant are constructed based on their geometric morphology, and the collision detections are conducted at the organ, individual and population scales.  The results indicate that the collision detection method developed in this study can accurately detect collisions between organs, especially at the plant canopy level with high collision frequency.  This collision detection-based virtual crop visualization method could reduce the phenomenon of organs cross-drawing effectively and enhance the reality of visualizations.
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Postponed and reduced basal nitrogen application improves nitrogen use efficiency and plant growth of winter wheat
TIAN Zhong-wei, LIU Xiao-xue, GU Shi-lu, YU Jin-hong, ZHANG Lei, ZHANG Wei-wei, JIANG Dong, CAO Wei-xing, DAI Ting-bo
2018, 17 (12): 2648-2661.   DOI: 10.1016/S2095-3119(18)62086-6
Abstract294)      PDF (1285KB)(714)      
Excessive nitrogen (N) fertilization with a high basal N ratio in wheat can result in lower N use efficiency (NUE) and has led to environmental problems in the Yangtze River Basin, China.  However, wheat requires less N fertilizer at seedling growth stage, and its basal N fertilizer utilization efficiency is relatively low; therefore, reducing the N application rate at the seedling stage and postponing the N fertilization period may be effective for reducing N application and increasing wheat yield and NUE.  A 4-year field experiment was conducted with two cultivars under four N rates (240 kg N ha–1 (N240),
180 kg N ha–1 (N180), 150 kg N ha–1 (N150), and 0 kg N ha–1 (N0)) and three basal N application stages (seeding (L0), four-leaf stage (L4), and six-leaf stage (L6)) to investigate the effects of reducing the basal N application rate and postponing the basal N fertilization period on grain yield, NUE, and N balance in a soil-wheat system.  There was no significant difference in grain yield between the N180L4 and N240L0 (control) treatments, and the maximum N recovery efficiency and N agronomy efficiency were observed in the N180L4 treatment.  Grain yield and NUE were the highest in the L4 treatment.  The leaf area index, flag leaf photosynthesis rate, flag leaf nitrate reductase and glutamine synthase activities, dry matter accumulation, and N uptake post-jointing under N180L4 did not differ significantly from those under N240L0.  Reduced N application decreased the inorganic N content in the 0–60-cm soil layer, and the inorganic N content of the L6 treatment was higher than those of the L0 and L4 treatments at the same N level.  Surplus N was low under the reduced N rates and delayed basal N application treatments.  Therefore, postponing and reducing basal N fertilization could maintain a high yield and improve NUE by improving the photosynthetic production capacity, promoting N uptake and assimilation, and reducing surplus N in soil-wheat systems.
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Leaf area index based nitrogen diagnosis in irrigated lowland rice
LIU Xiao-jun, CAO Qiang, YUAN Zhao-feng, LIU Xia, WANG Xiao-ling, TIAN Yong-chao, CAO Wei-xing, ZHU Yan
2018, 17 (01): 111-121.   DOI: 10.1016/S2095-3119(17)61714-3
Abstract735)      PDF in ScienceDirect      
Leaf area index (LAI) is used for crop growth monitoring in agronomic research, and is promising to diagnose the nitrogen (N) status of crops.  This study was conducted to develop appropriate LAI-based N diagnostic models in irrigated lowland rice.  Four field experiments were carried out in Jiangsu Province of East China from 2009 to 2014.  Different N application rates and plant densities were used to generate contrasting conditions of N availability or population densities in rice.  LAI was determined by LI-3000, and estimated indirectly by LAI-2000 during vegetative growth period.  Group and individual plant characters (e.g., tiller number (TN) and plant height (H)) were investigated simultaneously.  Two N indicators of plant N accumulation (NA) and N nutrition index (NNI) were measured as well.  A calibration equation (LAI=1.7787LAI2000–0.8816, R2=0.870**) was developed for LAI-2000.  The linear regression analysis showed a significant relationship between NA and actual LAI (R2=0.863**).  For the NNI, the relative LAI (R2=0.808**) was a relatively unbiased variable in the regression than the LAI (R2=0.33**).  The results were used to formulate two LAI-based N diagnostic models for irrigated lowland rice (NA=29.778LAI–5.9397; NNI=0.7705RLAI+0.2764).  Finally, a simple LAI deterministic model was developed to estimate the actual LAI using the characters of TN and H (LAI=–0.3375(TH×H×0.01)2+3.665(TH×H×0.01)–1.8249, R2=0.875**).  With these models, the N status of rice can be diagnosed conveniently in the field.
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Modeling curve dynamics and spatial geometry characteristics of rice leaves
ZHANG Yong-hui, TANG Liang, LIU Xiao-jun, LIU Lei-lei, CAO Wei-xing, ZHU Yan
2017, 16 (10): 2177-2190.   DOI: 10.1016/S2095-3119(16)61597-6
Abstract696)      PDF in ScienceDirect      
The objective of this work was to develop a dynamic model for describing leaf curves and a detailed spatial geometry model of the rice leaf (including sub-models for unexpanded leaf blades, expanded leaf blades, and leaf sheaths), and to realize three-dimensional (3D) dynamic visualization of rice leaves by combining relevant models.  Based on the experimental data of different cultivars and nitrogen (N) rates, the time-course spatial data of leaf curves on the main stem were collected during the rice development stage, then a dynamic model of the rice leaf curve was developed using quantitative modeling technology.  Further, a detailed 3D geometric model of rice leaves was built based on the spatial geometry technique and the non-uniform rational B-spline (NURBS) method.  Validating the rice leaf curve model with independent field experiment data showed that the average distances between observed and predicted curves were less than 0.89 and 1.20 cm at the tilling and jointing stages, respectively.  The proposed leaf curve model and leaf spatial geometry model together with the relevant previous models were used to simulate the spatial morphology and the color dynamics of a single leaf and of leaves on the rice plant after different growing days by 3D visualization technology.  The validation of the leaf curve model and the results of leaf 3D visualization indicated that our leaf curve model and leaf spatial geometry model could efficiently predict the dynamics of rice leaf spatial morphology during leaf development stages.  These results provide a technical support for related research on virtual rice.
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Quantifying the spatial variation in the potential productivity and yield gap of winter wheat in China
ZHANG Shi-yuan, ZHANG Xiao-hu, QIU Xiao-lei, TANG Liang, ZHU Yan, CAO Wei-xing, LIU Lei-lei
2017, 16 (04): 845-857.   DOI: 10.1016/S2095-3119(16)61467-3
Abstract957)      PDF in ScienceDirect      
Despite the improvement in cultivar characters and management practices, large gaps between the attainable and potential yields still exist in winter wheat of China.  Quantifying the crop potential yield is essential for estimating the food production capacity and improving agricultural policies to ensure food security.  Gradually descending models and geographic information system (GIS) technology were employed to characterize the spatial variability of potential yields and yield gaps in winter wheat across the main production region of China.  The results showed that during 2000–2010, the average potential yield limited by thermal resource (YGT) was 23.2 Mg ha–1, with larger value in the northern area relative to the southern area.  The potential yield limited by the water supply (YGW) generally decreased from north to south, with an average value of 1.9 Mg ha–1 across the entire study region.  The highest YGW in the north sub-region (NS) implied that the irrigation and drainage conditions in this sub-region must be improved.  The averaged yield loss of winter wheat from nutrient deficiency (YGN) varied between 2.1 and 3.1 Mg ha–1 in the study area, which was greater than the yield loss caused by water limitation.  The potential decrease in yield from photo-thermal-water-nutrient-limited production to actual yield (YGO) was over 6.0 Mg ha–1, ranging from 4.9 to 8.3 Mg ha–1 across the entire study region, and it was more obvious in the southern area than in the northern area.  These findings suggest that across the main winter wheat production region, the highest yield gap was induced by thermal resources, followed by other factors, such as the level of farming technology, social policy and economic feasibility.  Furthermore, there are opportunities to narrow the yield gaps by making full use of climatic resources and developing a reasonable production plan for winter wheat crops.  Thus, meeting the challenges of food security and sustainability in the coming decades is possible but will require considerable changes in water and nutrient management and socio-economic policies.
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Modeling Dynamics of Leaf Color Based on RGB Value in Rice
ZHANG Yong-hui, TANG Liang, LIU Xiao-jun, LIU Lei-lei, CAO Wei-xing , ZHU Yan
2014, 13 (4): 749-759.   DOI: 10.1016/S2095-3119(13)60391-3
Abstract2287)      PDF in ScienceDirect      
This paper was to develop a model for simulating the leaf color changes in rice (Oryza sativa L.) based on RGB (red, green, and blue) values. Based on rice experiment data with different cultivars and nitrogen (N) rates, the time-course RGB values of each leaf on main stem were collected during the growth period in rice, and a model for simulating the dynamics of leaf color in rice was then developed using quantitative modeling technology. The results showed that the RGB values of leaf color gradually decreased from the initial values (light green) to the steady values (green) during the first stage, remained the steady values (green) during the second stage, then gradually increased to the final values (from green to yellow) during the third stage. The decreasing linear functions, constant functions and increasing linear functions were used to simulate the changes in RGB values of leaf color at the first, second and third stages with growing degree days (GDD), respectively; two cultivar parameters, MatRGB (leaf color matrix) and AR (a vector composed of the ratio of the cumulative GDD of each stage during color change process of leaf n to that during leaf n drawn under adequate N status), were introduced to quantify the genetic characters in RGB values of leaf color and in durations of different stages during leaf color change, respectively; FN (N impact factor) was used to quantify the effects of N levels on RGB values of leaf color and on durations of different stages during leaf color change; linear functions were applied to simulate the changes in leaf color along the leaf midvein direction during leaf development process. Validation of the models with the independent experiment dataset exhibited that the root mean square errors (RMSE) between the observed and simulated RGB values were among 8 to 13, the relative RMSE (RRMSE) were among 8 to 10%, the mean absolute differences (da) were among 3.85 to 6.90, and the ratio of da to the mean observation values (dap) were among 3.04 to 4.90%. In addition, the leaf color model was used to render the leaf color change over growth progress using the technology of visualization, with a good performance on predicting dynamic changes in rice leaf color. These results would provide a technical support for further developing virtual plant during rice growth and development.
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Spatiotemporal Changes in Soil Nutrients: A Case Study in Taihu Region of China
LIU Lei-lei, ZHU Yan, LIU Xiao-jun, CAO Wei-xing, XU Mao, WANG Xu-kui , WANG En-li
2014, 13 (1): 187-194.   DOI: 10.1016/S2095-3119(13)60528-6
Abstract1558)      PDF in ScienceDirect      
The accurate assessment of the spatiotemporal changes in soil nutrients influenced by agricultural production provides the basis for development of management strategies to maintain soil fertility and balance soil nutrients. In this paper, we combined spatial measurements from 2 157 soil samples and geostatistical analysis to assess the spatiotemporal changes in soil organic carbon (SOC), total nitrogen (TN), available phosphorus (AP) and available potassium content (AK) from the first soil survey (in the 1980s) to the second soil survey (in the 2000s) in the Taihu region of Jiangsu Province in China. The results showed that average soil nutrients in three soil types all exhibited the increased levels in the 2000s (except for AK in the yellow brown soil). The standard deviation of soil nutrient contents increased (except for TN in the paddy soil). Agricultural production in the 20 years led to increases in SOC, TN, AP and AK by 74, 82, 89 and 65%, respectively, of the Taihu areas analyzed. From the 1980s to 2000s all the nugget/sill ratios of soil nutrients indices were between 25 and 75% (except for AK in the yellow brown soil in the 2000s), indicating moderate spatial dependence. The ratio of AP in the yellow brown soil in the 2000s was 88.74%, showing weak spatial dependence. The spatial correlation range values for SOC, TN, AP and AK in the 2000s all decreased. The main areas showing declines in SOC, TN and AP were in the northwest. For AK, the main region with declining levels was in the east and middle of western areas. Apparently, the increase in soil nutrients in the Taihu region can be mainly attributed to the large increase in fertilizer inputs, change in crop systems and enhanced residues management since the 1980s. Future emphasis should be placed on avoiding excess fertilizer inputs and balancing the effects of the fertilizers in soils.
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A New Method to Determine Central Wavelength and Optimal Bandwidth for Predicting Plant Nitrogen Uptake in Winter Wheat
YAO Xin-feng, YAO Xia, TIAN Yong-chao, NI Jun, LIU Xiao-jun, CAO Wei-xing , ZHU Yan
2013, 12 (5): 788-802.   DOI: 10.1016/S2095-3119(13)60300-7
Abstract1405)      PDF in ScienceDirect      
Plant nitrogen (N) uptake is a good indicator of crop N status. In this study, a new method was designed to determine the central wavelength, optimal bandwidth and vegetation indices for predicting plant N uptake (g N m-2) in winter wheat (Triticum aestivum L.). The data were collected from the ground-based hyperspectral reflectance measurements in eight field experiments on winter wheat of different years, eco-sites, varieties, N rates, sowing dates, and densities. The plant N uptake index (PNUI) based on NDVI of 807 nm combined with 736 nm was selected as the optimal vegetation index, and a linear model was developed with R2 of 0.870 and RMSE of 1.546 g N m-2 for calibration, and R2 of 0.834, RMSE of 1.316 g N m-2, slope of 0.934, and intercept of 0.001 for validation. Then, the effect of the bandwidth of central wavelengths on model performance was determined based on the interaction between central wavelength and bandwidth expansion. The results indicated that the optimal bandwidth varies with the changes of the central wavelength and with the interaction between the two bands in one vegetation index. These findings are important for prediction and diagnosis of plant N uptake more precise and accurate in crop management.
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Spatial and Temporal Characteristics of Rice Potential Productivity and Potential Yield Increment in Main Production Regions of China
JIANG Xiao-jian, TANG Liang, LIU Xiao-jun, CAO Wei-xing , ZHU Yan
2013, 12 (1): 45-56.   DOI: 10.1016/S2095-3119(13)60204-X
Abstract1762)      PDF in ScienceDirect      
The vast area and marked variation of China make it difficult to predict the impact of climate changes on rice productivity in different regions. Therefore, analyzing the spatial and temporal characteristics of rice potential productivity and predicting the possible yield increment in main rice production regions of China is important for guiding rice production and ensuring food security. Using meteorological data of main rice production regions from 1961 to 1970 (the 1960s) and from 1996 to 2005 (the 2000s) provided by 333 stations, the potential photosynthetic, photo-thermal and climatic productivities in rice crop of the 1960s and 2000s in main rice production regions of China were predicted, and differences in the spatial and temporal distribution characteristics between two decades were analyzed. Additionally, the potential yield increment based on the high yield target and actual yield of rice in the 2000s were predicted. Compared with the 1960s, the potential photosynthetic productivity of the 2000s was seen to have decreased by 5.40%, with rates in northeastern and southwestern China found to be lower than those in central and southern China. The potential photo-thermal productivity was generally seen to decrease (2.56%) throughout main rice production regions, decreasing most in central and southern China. However, an increase was seen in northeastern and southwestern China. The potential climatic productivity was observed to be lower (7.44%) in the 2000s compared to the 1960s, but increased in parts of central and southern China. The potential yield increment from the actual yield to high yield target in the 2000s were no more than 6×103 kg ha-1 and ranged from 6×103 to 12×103 kg ha-1 in most of the single- and double-cropping rice growing regions, respectively. The yield increasing potential from the high yield target to the potential photo-thermal productivity in 2000s were less than 10×103 kg ha-1 and ranged from 10×103 to 30×103 kg ha-1 in most of the single- and double-cropping rice growing regions, respectively. The potential yield increment contributed by irrigation was between 5×103 and 20×103 kg ha-1, and between 20×103 and 40×103 kg ha-1 in most of the single- and double-cropping rice growing regions, respectively. These findings suggested that the high yield could be optimized by making full use of climatic resources and through a reasonable management plan in rice crop.
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Common Spectral Bands and Optimum Vegetation Indices for Monitoring Leaf Nitrogen Accumulation in Rice andWheat
WANG Wei, YAO Xia, TIAN Yong-chao, LIU Xiao-jun, NI Jun, CAO Wei-xing , ZHU Yan
2012, 12 (12): 2001-2012.   DOI: 10.1016/S1671-2927(00)8737
Abstract1342)      PDF in ScienceDirect      
Real-time monitoring of nitrogen status in rice and wheat plant is of significant importance for nitrogen diagnosis, fertilization recommendation, and productivity prediction. With 11 field experiments involving different cultivars, nitrogen rates, and water regimes, time-course measurements were taken of canopy hyperspectral reflectance between 350-2 500 nm and leaf nitrogen accumulation (LNA) in rice and wheat. A new spectral analysis method through the consideration of characteristics of canopy components and plant growth status varied with phenological growth stages was designed to explore the common central bands in rice and wheat. Comprehensive analyses were made on the quantitative relationships of LNA to soil adjusted vegetation index (SAVI) and ratio vegetation index (RVI) composed of any two bands between 350-2 500 nm in rice and wheat. The results showed that the ranges of indicative spectral reflectance were largely located in 770-913 and 729-742 nm in both rice and wheat. The optimum spectral vegetation index for estimating LNA was SAVI (R822,R738) during the early-mid period (from jointing to booting), and it was RVI (R822,R738) during the mid-late period (from heading to filling) with the common central bands of 822 and 738 nm in rice and wheat. Comparison of the present spectral vegetation indices with previously reported vegetation indices gave a satisfactory performance in estimating LNA. It is concluded that the spectral bands of 822 and 738 nm can be used as common reflectance indicators for monitoring leaf nitrogen accumulation in rice and wheat.
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