中国农业科学 ›› 2016, Vol. 49 ›› Issue (21): 4239-4245.doi: 10.3864/j.issn.0578-1752.2016.21.018

• 研究简报 • 上一篇    下一篇

蝗虫微孢子虫套式PCR检测方法的建立及应用

扈鸿霞1,马宇轩1,王艳红2,林 峻3,李占武2,季 荣1

 
  

  1. 1新疆师范大学生命科学学院/新疆特殊环境物种多样性应用与调控实验室/中亚区域跨境有害生物联合控制国际研究中心,乌鲁木齐 830054
    2新疆哈密地区蝗虫鼠害预测预报防治站,新疆哈密 839000
    3新疆维吾尔自治区蝗虫鼠害预测预报防治中心站,乌鲁木齐 830046
  • 收稿日期:2016-05-16 出版日期:2016-11-01 发布日期:2016-11-01
  • 通讯作者: 季荣,E-mail:jirong@xjnu.edu.cn。李占武,E-mail:lizhanwu2016@126.com
  • 作者简介:扈鸿霞,E-mail:huhongxia111@126.com
  • 基金资助:
    新疆维吾尔自治区自然科学基金面上项目(2014211A042)

Establishment and Application of Nested-PCR Method for Detection of Paranosema locustae

HU Hong-xia1, MA Yu-xuan1, WANG Yan-hong2, LIN Jun3, LI Zhan-wu2, JI Rong1   

  1. 1College of Life Sciences, Xinjiang Normal University/Key Laboratory of Conservation Biology and Management for Xinjiang Special Species/International Research Center for Cross-border Pest Management in Central Asia, Urumqi 830054
    2Xinjiang  Hami Locust and Rat Plagues Forecast Station, Hami 839000, Xinjiang
    3The Locust and Rat Plagues Forecast Center of  Xinjiang Uygur Autonomous Region, Urumqi 830046
  • Received:2016-05-16 Online:2016-11-01 Published:2016-11-01

摘要: 【目的】建立一种灵敏、快捷的检测蝗虫微孢子虫(Paranosema locustae)的套式PCR方法,为运用微孢子虫防治蝗虫提供技术支持。【方法】以GenBank数据库中公布的保守性高的微孢子虫小核糖体亚单位RNA为目的基因,采用PrimerSelect软件设计两对特异的套式PCR引物P.L.-F1/P.L.-R1和P.L.-F2/P.L.-R2,将微孢子虫液用0.2 mol·L-1 KOH处理后得到的发芽液作为模板进行PCR扩增,建立以P.L.-F1/P.L.-R1为外侧引物、P.L.-F2/P.L.-R2为内侧引物的套式PCR,扩增产为分别为298和242 bp。对引物浓度、退火温度及循环数进行优化,建立套式PCR方法,以此方法对梯度稀释的微孢子虫液进行灵敏性检测,并对采自哈密地区巴里坤北山的蝗虫样品进行检测。同时对提取的微孢子虫液进行传统的显微镜检测,并比较两种方法的灵敏度。【结果】建立了蝗虫微孢子虫的套式PCR快速特异性检测方法,优化后的PCR反应体系均为20 μL:Buffer(10×)2.0 μL, dNTPs(10 mmol·L-10.3 μL,Taq DNA酶(250 U)0.3 μL,上、下游引物(10 μmol·L-1)各0.3 μL,微孢子虫发芽液(第2轮以第1轮产物10×稀释液为模板)1 μL,加水补充至20 μL;PCR反应程序为:94℃预变性3 min;94℃变性30 s,第1轮60℃退火(第2轮62℃退火)30 s,72℃延伸20 s,共35个循环;72℃延伸10 min,10℃保存。灵敏度试验显示,检测的微孢子虫数量可以达到12.2个孢子/µL(DNA量为1.07 pg·μL-1)。应用建立的套式PCR方法,对采自新疆哈密地区巴里坤北山的240头蝗虫样品进行了微孢子虫检测,检测结果为23.3%的阳性,而显微镜检测结果阳性仅为3.8%。【结论】 研究建立的套式PCR方法能够快速特异地检测蝗虫微孢子虫的感染,为蝗虫微孢子虫致病性研究及田间应用提供了技术支持。

关键词: 蝗虫微孢子虫, 套式PCR, 检测

Abstract: 【Objective】The objective of this study is to develop a rapid, sensitive and specific nested-PCR method for detection of Paranosema locustae and provide effective means for the monitoring of locusts and biological control. 【Method】 According to the sequence of small subunit ribosomal RNA genes of microsporidian published in GenBank, two pairs of primers were designed and synthesized (P.L.-F1/P.L.-R1 and P.L.-F2/P.L.-R2), and a series of assays (involving concentrations of primer pairs, Tm value and the number of cycling) were conducted to optimize the nested-PCR. P. locustae treated with 0.2 mol·L-1 KOH were used as template for nested-PCR. P.L.-F1 and P.L.-R1 were employed as the initial primers for the first amplification, which generated a 298 bp product, and P.L.-F2 and P.L.-R2 as the secondary primers for the final amplification, which generated a 242 bp fragment. Analytical sensitivity and reproducibility were assessed, respectively. The nested-PCR method was used to detect a series of dilution of P. locustae suspension, and to test the P. locustae suspension derived from Barkol Bei mountain in Hami region. At the same time, the P. locustae suspension was extracted and detected with the traditional microscope, and then the sensitivity of two methods was compared. 【Result】The nested PCR was established. The optimal parameters for the nested PCR reaction were performed in standard mixtures of 20 μL containing 2.0 μL of Buffer (10×), 0.3 μL of dNTPs (10 mmol·L-1), 0.3 μL of Taq DNA polymerase (250 U), 0.3 μL of each primer (10 μmol·L-1), 1 μL of DNA template (or the diluent of the first-round product was then diluted 10-fold with water) and 15.8 μL of double distilled water. Each PCR run was carried out in a thermal cycler. The conditions of the amplification were as follows: 1 cycle at 94℃ for 3 min, 35 cycles at 94℃ for 30 s, 60℃ (62℃ at secondary PCR) for 30 s, and 72℃ for 20 s and then 1 cycle at 72℃ for 10 min, with a final hold at 10℃. The result of two rounds PCR showed that the nested PCR assay could detect 12.2 spores/µL (1.07 pg DNA). A total of 240 locust samples from Bei mountain in Hami region were analyzed by nested PCR and microscope testing, respectively, the results showed that the positive detection rate was 23.3% and 3.8%, respectively. 【Conclusion】 The nested PCR mothed established in this study is more sensitivity than traditional microscope detection method. As well as, this assay can avoid human error, and more suitable for rapid and large-scale infection intensity survey.

Key words: Paranosema locustae, nested polymerase chain reaction, detection