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1. 变栖克雷伯氏菌FH-1的定殖可诱导大豆生长并缓解核盘菌胁迫
ZHAI Qian-hang, PAN Ze-qun, ZHANG Cheng, YU Hui-lin, ZHANG Meng, GU Xue-hu, ZHANG Xiang-hui, PAN Hong-yu, ZHANG Hao
Journal of Integrative Agriculture    2023, 22 (9): 2729-2745.   DOI: 10.1016/j.jia.2023.01.007
摘要240)      PDF    收藏
由核盘菌(Sclerotinia sclerotiorum)引起的菌核病是一种毁灭性的土传大豆病害,会造成巨大的产量损失。我们以前报道过变栖克雷伯氏菌FH-1可以降解莠去津除草剂,并且可以增加莠去津敏感作物(如大豆)的营养生长。我们发现FH-1可以促进大豆生长并诱导对菌核病菌的抗性,为了证明FH-1对大豆菌核病菌的生防机制并评价其生防能力,我们在体外培养基试验中证明菌株FH-1可以固定培养基中的氮,溶解无机磷和钾,并产生吲哚乙酸和铁载体,具有促进植物生长的潜力。盆栽试验结果表明,变栖克雷伯氏菌FH-1能促进大豆植株发育,显著提高株高、鲜重和根长,并诱导大豆叶片对菌核病的抗性。用菌株FH-1治疗的疾病进展曲线下面积(AUDPC)显著低于对照,并且在48小时内减少了高达42.2%。(P < 0.001)。此外,紫外分光光度计法测量结果表明菌株FH-1可以增强参与大豆植物防御的过氧化氢酶、超氧化物歧化酶、过氧化物酶、苯丙氨酸解氨酶和多酚氧化酶的酶活性,并减少了叶片中丙二醛的积累。定量实时PCR检测了可能参与大豆抵抗核盘菌胁迫的相关基因的转录水平,结果表明诱导抗性的机制似乎主要是由于变栖克雷伯氏菌FH-1诱导PR10、PR12、AOS、CHS和PDF1.2基因转录水平的提高。利用结晶紫染色法测定了菌株FH-1具有生物膜形成能力,用共聚焦荧光显微镜和扫描电镜观测菌株FH-1在大豆根上的定殖情况,菌株FH-1可以定殖在大豆根表面、根毛和外皮层上形成生物膜。综上所述,变栖克雷伯氏菌FH-1在大豆根部的定殖有助于诱导参与植物保护的防御酶和相关防御基因的表达,诱导大豆对菌核病菌的抗性表现出生物防治潜力。这对大豆的种植和生长具有重要意义。此外,本研究有助于理解变种芽胞杆菌FH-1、大豆植株和核盘菌之间相互作用的有价值的第一步,这为绿色防控提供了新的思路。


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2. cAMP和钙离子信号循环效应对枣生长发育的影响
WANG Li-xin, WANG Lin-xia, ZHANG Meng-ling, QU Ying-yue, YUAN Ye, Ehsan SADEGHNEZHAD, GAO Meng-jiao, ZHAO Ruo-yu, QI Chao-feng, GUO Xiao-xue, ZHU Wen-hui, LI Rui-mei, DAI Li, LIU Meng-jun, LIU Zhi-guo
Journal of Integrative Agriculture    2023, 22 (7): 2094-2110.   DOI: 10.1016/j.jia.2023.04.039
摘要179)      PDF    收藏

3',5'-环磷酸腺苷(cAMP)是一种重要的代谢产物,特别在枣中高效积累。然而,cAMP在枣细胞中的功能尚未得到系统研究。因此,我们通过枣细胞悬浮系的建立、原生质体分离及荧光强度分析研究了cAMP与钙离子信号的关系。首先,外源cAMP处理可以促进枣的生长和内源cAMP的积累。通过对过表达腺苷酸环化酶(ZjAC)的转基因拟南芥转录组分析鉴定出60个与钙离子信号相关的差异表达基因(DEG),发现这些基因参与钙离子信号转导及细胞间/内的反应。另外,外源cAMP和钙离子促进剂A23187等药物处理可以诱导枣细胞中ZjAC的表达、cAMP的积累及钙离子向细胞质中的流入,而钙离子螯合剂EGTA或腺苷酸环化酶抑制剂bithionol处理抑制了这种增加。此外,外源cAMP处理可以激活钙离子通道及相关下游基因,如ZjCNGC2ZjMAPK2ZjMAPKK2ZjMAPKK4。总之,该研究结果表明cAMP的合成依赖于钙离子信号内流,钙离子信号和cAMP之间的级联放大效应参与细胞内信号转导从而促进枣的生长发育。

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3. JIA-2020-2457 遗传多样性和全基因组关联分析揭示东北地区粳稻育种进程中与碾磨和外观品质相关的适应位点
XU Xin, YE Jun-hua, YANG Ying-ying, LI Ruo-si, LI Zhen, WANG Shan, SUN Yan-fei, ZHANG Meng-chen, XU Qun, FENG Yue, WEI Xing-hua, YANG Yao-long
Journal of Integrative Agriculture    2022, 21 (6): 1539-1550.   DOI: 10.1016/S2095-3119(21)63701-2
摘要387)      PDF    收藏

本研究以来源于辽宁、吉林和黑龙江三个省份的200个粳稻品种为实验材料,对碾磨和外观品质相关的性状进行考察。材料的系谱分析和遗传多样性分析结果表明,来自吉林省的品种遗传多样性最高。稻米品质的评价结果表明,来自辽宁省的品种具较好的碾磨品质,而来自黑龙江的品种具较好的外观品质。本研究同时用单位点和多位点的全基因组关联分析(GWAS)对碾磨和外观品质相关的基因位点进行计算,结果共检测到99个显著的SNP位点。其中,共3个SNP位点同时在混合线性模型(MLM)、mrMLM和FASTmrMLM这3种计算模型中检测到,进一步利用连锁不平衡分析获得对应的3个候选区域(qBRR-1、qBRR-9和qDEC-3),以便于后续的候选基因分析。由于候选区域内的候选基因超过300个,研究还结合基因GO分析以鉴定潜在的候选基因。此外,候选区域的遗传多样性分析结果表明,qBRR-9很可能在东北粳稻的育种过程中受到了较强的选择。这些结果为水稻育种和品质改良提供了具有参考意义的信息。


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4. The use of widely targeted metabolite profiling to reveal the senescence changes in postharvest ‘Red Globe’ (Vitis vinifera) grape berries
XU Teng-fei, YANG Xin, ZHANG Meng, GUO Shui-huan, FU Wen-jing, ZHOU Bi-jiang, LIU Yu-jia, MA Hai-jun, FANG Yu-lin, YANG Gang, MENG Jiang-fei
Journal of Integrative Agriculture    2022, 21 (4): 1028-1043.   DOI: 10.1016/S2095-3119(21)63725-5
摘要160)      PDF    收藏

鲜食葡萄果实在采后衰老过程中代谢物会发生一系列变化。本研究的目的是利用基于UPLC-MS/MS的广泛靶向代谢组技术分析鲜食葡萄红地球在不同的衰老阶段代谢物差异。结果显示共鉴定出135种差异代谢物。在采后衰老过程中,大部分差异类黄酮(如花葵素3-O-葡萄糖苷、槲皮素3-O-葡萄糖苷和花青素3-O-葡萄糖苷)和L-天冬氨酸含量下降,而酚酸(如反式4-羟基肉桂酸甲酯)和泛醇含量升高。在衰老的前期,大部分差异脂质(尤其是溶血蛋白),核苷酸及其衍生物(如尿苷)的水平降低,但是在衰老后期这些代谢物的含量又升高。基于此,这些结果将为合理控制鲜食葡萄果实的采后衰老过程提供了指导,为进一步研究采后葡萄的衰老机制奠定坚实的基础。


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5. A sensitive SYBR Green RT-qPCR method for grapevine virus E and its application for virus detection in different grapevine sample types
REN Fang, ZHANG Zun-ping, FAN Xu-dong, HU Guo-jun, ZHANG Meng-yan, DONG Ya-feng
Journal of Integrative Agriculture    2020, 19 (7): 1834-1841.   DOI: 10.1016/S2095-3119(19)62784-X
摘要137)      PDF    收藏
To develop a rapid and high-sensitivity method for detection of grapevine virus E (GVE), a SYBR Green based real-time fluorescence quantitative RT-PCR method (RT-qPCR) was established.  This method could be used to detect GVE specifically, and the sensitivity was about 100 times greater than conventional RT-PCR.  An excellent linear correlation (R2=0.997) and a high amplification efficiency (E=97.5%) were obtained from the standard curve of this method.  Reproducibility tests revealed that the coefficients of variation in the intra- and inter-assay results were 0.31–1.03% and 0.82–2.62%, respectively, indicating a good reproducibility.  The RT-qPCR method could be used to detect GVE in a wide range of grapevine sample types.  The detection rates of RT-qPCR for nearly all sample types from different positions and seasons were higher than conventional RT-PCR.  The detection rates in spring, summer, autumn and winter increased gradually.  Samples in autumn and winter were best for detection, and the detection rates of most samples were 80–100%, which were 10 to 40% higher than conventional RT-PCR.  In general, old petioles and branches were the best tissues for GVE detection.  The detection rates of these samples in each season were all 100%, which were 20 to 40% higher than conventional RT-PCR.  The second highest rates were in the old leaf, with detection rates for RT-qPCR of 80–100% in all seasons, which were 20 to 40% higher than conventional RT-PCR.  GVE could be difficultly detected in young leaves by conventional RT-PCR, and the detection rates were only 0–50%, while by RT-qPCR the rates could increase to 0–80%.  A total of 33 out of 363 samples (belonging to 68 cultivars) from 20 regions in China were detected to be positive by RT-qPCR (9.1%), which was more than twice the rate of the conventional RT-PCR (3.9%). 
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6. Prevalence and genetic diversity of grapevine fabavirus isolates from different grapevine cultivars and regions in China
FAN Xu-dong, ZHANG meng-yan, ZHANG Zun-ping, REN Fang, HU Guo-jun, DONG Ya-feng
Journal of Integrative Agriculture    2020, 19 (3): 768-774.   DOI: 10.1016/S2095-3119(19)62677-8
摘要129)      PDF    收藏
A total of 288 grapevine samples of 61 different grapevine cultivars, collected from 22 provinces and regions, were analyzed by reverse transcription-PCR (RT-PCR) for the presence of grapevine fabavirus (GFabV).  PCR detection results showed the incidences of GFabV were 12.8% (30/235) and 48.1% (25/52) in the asymptomatic and symptomatic vines, respectively.  The genetic diversity of GFabV isolates was analyzed based on partial nucleotide and encoded amino acid sequences of the RNA1 and RNA2 polyprotein genes.  Phylogenetic analyses of the RNA1 and RNA2 gene sequences divided the GFabV isolates into five well-defined groups.  Groups 1, 2, and 4 comprised only Chinese isolates.  This article represents the first report for the prevalence and genetic diversity of GFabV in grapevines grown in China.
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7. Investigation on the co-infections of Toxoplasma gondii with PRRSV, CSFV or PCV-2 in swine in part of China
Wang Shuai, ZHang Meng, LIU Xin-chao, LIn Tao, Yang Han-chun, YUan Shi-shan, ZHao guang-wei, Ia Hassan, Yan Ruo-feng, Song Xiao-kai, XU Li-xin, LI Xiang-rui
Journal of Integrative Agriculture    2015, 14 (9): 1838-1844.   DOI: 10.1016/S2095-3119(15)61044-9
摘要1515)      PDF    收藏
The objective of the present investigation was to estimate the prevalence of Toxoplasma gondii infection and co-infection with porcine reproductive and respiratory syndrome virus (PRRSV), classical swine fever virus (CSFV) and porcine circovirus type 2 (PCV-2) in pigs in China. A total of 372 tissues or serum samples collected from pigs distributed in 9 provinces/ municipalities of China during the period from February 2011 to November 2012 were assayed for T. gondii antigens and antibodies using enzyme linked immunosorbent assay (ELISA) technique, while the PCR was designed for the detection of the PRRSV, CSFV and PCV-2, respectively. The total positive rate of T. gondii, PRSSV, CSFV and PCV-2 was 9.14% (34/372), 50.00% (186/372), 37.10% (138/372) and 3.23% (12/372), respectively. Among the 34 T. gondii positive samples, 26 samples were simultaneously infected with T. gondii and viruses, while the remaining eight samples were infected with T. gondii alone. In addition, the co-infection rate of T. gondii with PRSSV, T. gondii with PRSSV and CSFV, T. gondii with PRSSV and PCV-2, T. gondii with CSFV and PCV-2, T. gondii with PRSSV, CSFV and PCV-2 was 1.61% (6/372), 4.03% (15/372), 0.27% (1/372), 0.27% (1/372) and 0.81% (3/372), respectively. The results of the present survey revealed that PRRSV and CSFV were the common pathogens co-existing with porcine toxoplasmosis in China, and both of them could increase the chances of T. gondii infection in pig. This is the first report of T. gondii co-infections with viruses in pigs. It is very important to understand the interactions of parasite and virus, and can be used as reference data for the control and prevention of co-infections of T. gondii and viruses in pigs.
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8. Type I strain of Toxoplasma gondii from chicken induced different immune responses with that from human, cat and swine in chicken
Zhao Guang-wei, WanG Shuai, WanG Wang, ZhanG Zhen-chao, XIe Qing, ZhanG Meng, I a hassan, Yan Ruo-feng, SonG Xiao-kai, Xu Li-xin, LI Xiang-rui
Journal of Integrative Agriculture    2015, 14 (5): 956-965.   DOI: 10.1016/S2095-3119(14)60861-3
摘要2216)      PDF    收藏
In this study, four strains of Toxoplasma gondii with the same genetic type (Type I) originated from chicken, human, cat and swine were used to compare the immune responses in resistant chicken host to investigate the relationships between the parasite origins and the pathogenicity in certain host. A total of 300, 10-day-old chickens were allocated randomly into five groups which named JS (from chicken), CAT (from cat), CN (from swine), RH (from human) and a negative control group (–Ve) with 60 birds in each group. Tachyzoites of four different T. gondii strains (JS, CAT, CN and RH) were inoculated intraperitoneally with the dose of 1×107 in the four designed groups, respectively. The negative control (–Ve) group was mockly inoculated with phosphate-buffered saline (PBS) alone. Blood and spleen samples were obtained on the day of inoculation (day 0) and at days 4, 11, 25, 39 and 53 post-infection to screen the immunopathological changes. The results demonstrated some different immune characters of T. gondii infected chickens with that of mice or swine previous reported. These differences included up-regulation of major histocompatibility complex class II (MHC II) molecules in the early stage of infection, early peak expressions of interleukin (IL)-12 (IL-12) and -10 (IL-10) and long keep of IL-17. These might partially contribute to the resistance of chicken to T. gondii infection. Comparisons to chickens infected with strains from human, cat and swine, chickens infected with strain from chicken showed significant high levels of CD4+ and CD8+ T cells, interferon gamma (IFN-γ), IL-12 and IL-10. It suggested that the strain from chicken had different ability to stimulate cellular immunity in chicken.
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9. 18S核糖体RNA甲基转移酶METTL5介导CDX2翻译调控猪早期胚胎发育
XU Teng-teng, ZHANG Meng-ya, LIU Qiu-chen, WANG Xin, LUO Peng-fei, LIU Tong, YAN Ye-lian, ZHOU Na-ru, MA Yang-yang, YU Tong, LI Yun-sheng, CAO Zu-bing, ZHANG Yun-hai
Journal of Integrative Agriculture    DOI: 10.1016/j.jia.2023.10.013
录用日期: 2023-10-19

10. MiR-21-5p改善白消安诱导的睾丸功能障碍并维持精子发生
ZHANG Meng-fei, WAN Shi-cheng, CHEN Wen-bo, YANG Dong-hui, WANG Cong-liang, LI Ba-lun, Aili Aierken, DU Xiao-min, LI Yun-xiang, WU Wen-ping, WANG Yu-qi, XIE Fang-de, LUO Xuan, LI Na, LI Xue-ling, YANG Lei, Ahmed Hamed Arisha, HUA Jin-lian
Journal of Integrative Agriculture    DOI: 10.1016/j.jia.2024.02.004
录用日期: 2024-03-07