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1. 有机肥替代化肥降低节水灌溉稻田N2O排放的潜力及微生物学机制研究
Delei Kong, Xianduo Zhang, Qidong Yu, Yaguo Jin, Peikun Jiang, Shuang Wu, Shuwei Liu, Jianwen Zou
Journal of Integrative Agriculture    2024, 23 (9): 3159-3173.   DOI: 10.1016/j.jia.2024.03.047
摘要97)      PDF    收藏
节水灌溉策略可以有效减少稻田甲烷排放,但由于土壤含氧量和氧化还原电位的变化,会强烈刺激氧化亚氮(N2O)的排放。然而,目前有关不同施肥措施下节水灌溉稻田土壤N2O排放与氮(N)循环功能基因之间的关系却很少被研究。此外,有机肥替代化肥对稻田N2O排放的减排潜力及微生物学机制有待进一步阐明。本研究分析了我国东南部连续两年不同施肥措施对稻田土壤N2O排放和相关功能微生物【氨氧化古菌(AOA)、氨氧化细菌(AOB)、nirSnirKnosZ】的影响。共设置了三个试验处理:不施氮肥(Control)、化学氮肥(Ni)和有机肥部分替代化学氮肥(Ni+No)。研究结果表明,平均两个水稻生长季,Control、Ni和Ni+No处理的N2O累积排放量分别为0.47、4.62和4.08 kg ha−1。与Ni处理相比,Ni+No施肥措施在保障水稻产量的同时,显著降低了土壤N2O排放量11.6%,其N2O排放因子(EF)为0.95%。与Control处理相比,施用氮肥可以显著提高AOB、nirSnirKnosZ基因丰度。有机肥部分替代化学氮肥显著降低了AOB和nirS基因丰度,但增加了nosZ基因丰度。AOB对氮肥的响应比AOA更敏感。N2O累积排放量与AOB、nirS基因丰度呈正相关关系,而与nosZ基因丰度、nosZ/nirS比值呈负相关关系。综上所述,在节水灌溉稻田中,有机肥替代化学氮肥可以减少土壤N2O排放,主要通过改变土壤NO3--N、pH和DOC含量,从而抑制硝化过程的氨氧化和反硝化过程的亚硝酸盐还原,以及增强反硝化过程的N2O还原。
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2. Differentially expressed miRNAs in anthers may contribute to the fertility of a novel Brassica napus genic male sterile line CN12A
Dong Yun, Wang Yi, Jin Feng-wei, Xing Li-juan, Fang Yan, Zhang Zheng-ying, ZOU Jun-jie, Wang Lei, Xu Miao-yun
Journal of Integrative Agriculture    2020, 19 (7): 1731-1742.   DOI: 10.1016/S2095-3119(19)62780-2
摘要95)      PDF    收藏
In Brassica napus L. (rapeseed), complete genic male sterility (GMS) plays an important role in the utilization of heterosis.  Although microRNAs (miRNAs) play essential regulatory roles during bud development, knowledge of how GMS is regulated by miRNAs in rapeseed is rather limited.  In this study, we obtained a novel recessive GMS system, CN12AB.  The sterile line CN12A has defects in tapetal differentiation and degradation.  Illumina sequencing was employed to examine the expression of miRNAs in the buds of CN12A and the fertile line CN12B.  We identified 85 known miRNAs and 120 novel miRNAs that were expressed during rapeseed anther development.  When comparing the expression levels of miRNAs between CN12A and CN12B, 19 and 18 known miRNAs were found to be differentially expressed in 0.5–1.0 mm buds and in 2.5–3.0 mm buds, respectively.  Among these, the expression levels of 14 miRNAs were higher and the levels of 23 miRNAs were lower in CN12A compared with CN12B.  The predicted target genes of these differentially expressed miRNAs encode protein kinases, F-box domain-containing proteins, MADS-box family proteins, SBP-box gene family members, HD-ZIP proteins, floral homeotic protein APETALA 2 (AP2), and nuclear factor Y, subunit A.  These targets have previously been reported to be involved in pollen development and male sterility, suggesting that miRNAs might act as regulators of GMS in rapeseed anthers.  Furthermore, RT-qPCR data suggest that one of the differentially expressed miRNAs, bna-miR159, plays a role in tapetal differentiation by regulating the expression of transcription factor BnMYB101 and participates in tapetal degradation and influences callose degradation by manipulating the expression of BnA6.  These findings contribute to our understanding of the roles of miRNAs during anther development and the occurrence of GMS in rapeseed.
 
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3. Molecular cloning and functional characterization of apple U-box E3 ubiquitin ligase gene MdPUB29 reveals its involvement in salt tolerance
HAN Peng-liang, DONG Yuan-hua, JIANG Han, HU Da-gang, HAO Yu-jin
Journal of Integrative Agriculture    2019, 18 (7): 1604-1612.   DOI: 10.1016/S2095-3119(19)62594-3
摘要227)      PDF    收藏
An E3 ubiquitin ligase gene (Genbank accession no.: MD01G1010900) was cloned from the Royal Gala apple genome (Malus×domestica Borkh.).  Sequence analysis showed that the length of the MdPUB29 gene was 1 275 bp, encoding 424 amino acids.  Phylogenetic tree analysis indicated that the apple E3 ubiquitin ligase exhibited the greatest sequence similarity to Pyrus×bretschneideri.  The predicted protein structural domain of MdPUB29 showed that it contained a U-box domain.  qRT-PCR analysis showed that MdPUB29 was expressed widely in different tissues of the Royal Gala apple species, and was highly expressed in the root, while the expression of MdPUB29 was significantly inhibited by exogenous NaCl.  Immunoblotting assays revealed that MdPUB29 protein abundance in tissue cultures of the Royal Gala apple accumulated under NaCl stress conditions.  Three-dimensional protein structure prediction indicated that MdPUB29 was highly homologous with AtPUB29.  The growing potential of MdPUB29-expressing apple calli and Arabidopsis were much stronger than that of the control under salt stress conditions, suggesting that MdPUB29 may positively regulate salt tolerance.
 
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4. Overexpression of vacuolar proton pump ATPase (V-H+-ATPase) subunits B, C and H confers tolerance to salt and saline-alkali stresses in transgenic alfalfa (Medicago sativa L.)
WANG Fa-wei, WANG Chao, SUN Yao, WANG Nan, LI Xiao-wei, DONG Yuan-yuan, Yao Na, Liu Xiu-ming, CHEN Huan, CHEN Xi-feng, WANG Zhen-min, LI Hai-yan
Journal of Integrative Agriculture    2016, 15 (10): 2279-2289.   DOI: 10.1016/S2095-3119(16)61399-0
摘要1601)      PDF    收藏
    The vacuolar proton pump ATPase (V-H+-ATPase), which is a multi-subunit membrane protein complex, plays a major role in the activation of ion and nutrient transport and has been suggested to be involved in several physiological processes, such as cell expansion and salt tolerance. In this study, three genes encoding V-H+-ATPase subunits B (ScVHA-B, GenBank: JF826506), C (ScVHA-C, GenBank: JF826507) and H (ScVHA-H, GenBank: JF826508) were isolated from the halophyte Suaeda corniculata. The transcript levels of ScVHA-B, ScVHA-C and ScVHA-H were increased by salt, drought and saline-alkali treatments. V-H+-ATPase activity was also examined under salt, drought and saline-alkali stresses. The results showed that V-H+-ATPase activity was correlated with salt, drought and saline-alkali stress. Furthermore, V-H+-ATPase subunits B, C and H (ScVHA-B, ScVHA-C and ScVHA-H) from S. corniculata were introduced separately into the alfalfa genome. The transgenic alfalfa was verified by Southern and Northern blot analysis. During salt and saline-alkali stresses, transgenic linevacuolar proton pump, salt tolerance, saline-alkali tolerance, alfalfa
s carrying the B, C and H subunits had higher germination rates than the wild type (WT). More free proline, higher superoxide dismutase (SOD) activity and lower malondialdehyde (MDA) levels were detected in the transgenic plants under salt and saline-alkali treatments. Moreover, the ScVHA-B transgenic lines showed greater tolerance to salt and saline-alkali stresses than the WT. These results suggest that overexpression of ScVHA-B, ScVHA-C and ScVHA-H improves tolerance to salt and saline-alkali stresses in transgenic alfalfa.
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5. Interactions of water and nitrogen addition on soil microbial community composition and functional diversity depending on the inter-annual precipitation in a Chinese steppe
SUN Liang-jie, QI Yu-chun, DONG Yun-she, HE Ya-ting, PENG Qin, LIU Xin-chao, JIA Jun-qiang, GUO Shu-fang, CAO Cong-cong
Journal of Integrative Agriculture    2015, 14 (4): 788-799.   DOI: 10.1016/S2095-3119(14)60773-5
摘要2021)      PDF    收藏
Water and nitrogen are primary limiting factors in semiarid grassland ecosystems. Our knowledge is still poor regarding the interactive effects of water and N addition on soil microbial communities, although this information is crucial to reveal the mechanisms of the terrestrial ecosystem response to global changes. We addressed this problem by conducting a field experiment with a 15% surplus of the average rainfall under three levels of N addition (50, 100, and 200 kg N ha–1 yr–1) in two consecutive years in Inner Mongolia, China. Microbial community composition and functional diversity were analyzed based on phospholipid fatty acids (PLFA) and BIOLOG techniques, respectively. The results showed that water addition did not affect the soil microbial community composition, but much more yearly precipitation generally decreased the PLFA concentration, which implied a fast response of soil microbes to changes of water condition. Soil fungi was depressed only by N addition at the high level (200 kg N ha–1 yr–1) and without hydrologic leaching, while Gram-negative bacteria was suppressed probably by plant competition at high level N addition but with hydrologic leaching. The study found unilateral positive/negative interactions between water and N addition in affecting soil microbial community, however, climate condition (precipitation) could be a significant factor in disturbing the interactions. This study highlighted that: (1) The sustained effect of pulsed water addition was minimal on the soil microbial community composition but significant on the microbial community functional diversity and (2) the complex interaction between water and N addition on soil microbial community related to the inter-annual variation of the climate and plant response.
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6. Exogenous Nitric Oxide Involved in Subcellular Distribution and Chemical Forms of Cu2+ Under Copper Stress in Tomato Seedlings
DONG Yu-xiu, WANG Xiu-feng , CUI Xiu-min
Journal of Integrative Agriculture    2013, 12 (10): 1783-1790.   DOI: 10.1016/S2095-3119(13)60367-6
摘要1185)      PDF    收藏
Nitric oxide (NO), a bioactive signaling molecule, serves as an antioxidant and anti-stress agent under abiotic stress. A hydroponics experiment was conducted to investigate the effects of sodium nitroprusside (SNP), a NO donor, on tomato seedlings exposed to 50 μmol L-1 CuCl2. The results show that copper is primarily stored in the soluble cell sap fraction in the roots, especially after treatment with Cu+SNP treatment, which accounted for 66.2% of the total copper content. The copper concentration gradually decreased from the roots to the leaves. In the leaves, exogenous NO induces the storage of excess copper in the cell walls. Copper stress decreases the proportion of copper integrated with pectates and proteins, but exogenous NO remarkably reverses this trend. The alleviating effect of NO is blocked by hemoglobin. Thus, exogenous NO is likely involved in the regulation of the subcellular copper concentrations and its chemical forms under copper stress. Although exogenous NO inhibited the absorption and transport of excess copper to some extent, the copper accumulation in tomato seedlings significantly increased under copper stress. The use of exogenous NO to enhance copper tolerance in some plants is a promising method for copper remediation.
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7. Effects of Nitric Oxide on the Quality and Pectin Metabolism of Yali Pears During Cold Storage
LIU Li-qin, DONG Yu, GUAN Jun-feng
Journal of Integrative Agriculture    2011, 10 (7): 1125-1133.   DOI: 10.1016/S1671-2927(11)60102-8
摘要1579)      PDF    收藏
The effect of fumigation with 10, 20, and 30 μL L-1 nitric oxide (NO) was investigated to study the effects of NO on thequality of Yali pears during cold storage. The ethylene production, composition of cell walls, and cell-wall-modifyingenzyme activities were measured on fruits which were fumigated with NO (20 μL L-1). The results showed that NO not onlyreduced the peak value of ethylene production rate, the soluble sugar, soluble solid content, maintained higher firmness,starch, and NO content, but also retarded the degradation of covalent soluble pectin, accumulation of ionic soluble pectinand water soluble pectin. Moreover, NO fumigation decreased the activities of polygalacturonase (PG) and â-galactosidase(â-Gal) and delayed the peak of PG activity of fruits. Therefore, it indicated that NO fumigation could delay the softeningand ripening of Yali pears.
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8. Actin and Myosin Co-Localize in Plasmodesmata and Ectodesmata-Like Structure
DONG Yu, LIU Na, LIU Gang, LI Wen-long, YAN Ai-hua, WANG Dong-mei
Journal of Integrative Agriculture    2011, 10 (6): 845-849.   DOI: 10.1016/S1671-2927(11)60070-9
摘要3041)      PDF    收藏
Actin and myosin were found to be associated with the cytoplasmic sleeve of plasmodesmata. As cytoskeletal proteins, actin and myosin are believed to regulate the conductivity of plasmodesmata (PDs) in higher plants. Using immunocytochemical methods, we found the two proteins to be co-localized - and closely linked to each other - in plasmodesmata and ectodesmata-like structure in ageing parenchymatous cells of Allium sativum L. We suggest that intercellular communication is affected by the interaction between actin and myosin.
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