Anders S. 2010. Analysing RNA-Seq data with the DESeq package. Molecular Biology, 43, 1–17.
Boyd C, Hughes T, Pypaert M, Novick P. 2004. Vesicles carry most exocyst subunits to exocytic sites marked by the remaining two subunits, Sec3p and Exo70p. Journal of Cell Biology, 167, 889–901.
Buendia L, Ribeyre C, Bensmihen S, Lefebvre B. 2019. Brachypodium distachyon tar2lhypo mutant shows reduced root developmental response to symbiotic signal but increased arbuscular mycorrhiza. Plant Signaling & Behavior, 14, e1651608.
Buysens C, de Boulois H D, Declerck S. 2015. Do fungicides used to control Rhizoctonia solani impact the non-target arbuscular mycorrhizal fungus Rhizophagus irregularis? Mycorrhiza, 25, 277–288.
Chen C H, Liu M L, Jiang L, Liu X F, Zhao J Y, Yan S S, Yang S, Ren H Z, Liu R Y, Zhang X L. 2014. Transcriptome profiling reveals roles of meristem regulators and polarity genes during fruit trichome development in cucumber (Cucumis sativus L.). Journal of Experimental Botany, 65, 4943–4958.
Cole R A, McInally S A, Fowler J E. 2014. Developmentally distinct activities of the exocyst enable rapid cell elongation and determine meristem size during primary root growth in Arabidopsis. BMC Plant Biology, 14, 1–20.
Cui L, Wang J G, Tang Z H, Zhang Z, Yang S, Guo F, Li X G, Meng J J, Zhang J L, Kuzyakov Y, Wan S B. 2024. General and specialized metabolites in peanut roots regulate arbuscular mycorrhizal symbiosis. Journal of Integrative Agriculture, 23, 2618–2632.
Cvrcková F, Grunt M, Bezvoda R, Hála M, Kulich I, Rawat A, Zársky V. 2012. Evolution of the land plant exocyst complexes. Frontiers in Plant Science, 3, 159.
Dai H L, Zhang X W, Zhao B Y, Shi J C, Zhang C, Wang G, Yu N, Wang E T. 2022. Colonization of mutualistic mycorrhizal and parasitic blast fungi requires OsRAM2-regulated fatty acid biosynthesis in rice. Molecular Plant-Microbe Interactions, 35, 178–186.
Drdová E J, Synek L, Pecenková T, Hála M, Kulich I, Fowler J E, Murphy A S, Zarsky V. 2013. The exocyst complex contributes to PIN auxin efflux carrier recycling and polar auxin transport in Arabidopsis. Plant Journal, 73, 709–719.
Etemadi M, Gutjahr C, Couzigou J M, Zouine M, Lauressergues D, Timmers A, Audran C, Bouzayen M, Bécard G, Combier J P. 2014. Auxin perception is required for arbuscule development in arbuscular mycorrhizal symbiosis. Plant Physiology, 166, 281–292.
Feddermann N, Muni R R D, Zeier T, Stuurman J, Ercolin F, Schorderet M, Reinhardt D. 2010. The PAM1 gene of petunia, required for intracellular accommodation and morphogenesis of arbuscular mycorrhizal fungi, encodes a homologue of VAPYRIN. Plant Journal, 64, 470–481.
Guo R, Wu Y N, Liu C C, Liu Y N, Tian L, Cheng J F, Pan Z Y, Wang D, Wang B. 2022. OsADK1, a novel kinase regulating arbuscular mycorrhizal symbiosis in rice. New Phytologist, 234, 256–268.
Gutjahr C, Banba M, Croset V, An K, Miyao A, An G, Hirochika H, Imaizumi-Anraku H, Paszkowski U. 2008. Arbuscular mycorrhiza-specific signaling in rice transcends the common symbiosis signaling pathway. Plant Cell, 20, 2989–3005.
Gutjahr C, Casieri L, Paszkowski U. 2009. Glomus intraradices induces changes in root system architecture of rice independently of common symbiosis signaling. New Phytologist, 182, 829–837.
Hála M, Cole R, Synek L, Drdová E, Pecenková T, Nordheim A, Lamkemeyer T, Madlung J, Hochholdinger F, Fowler J E, Zársky V. 2008. An exocyst complex functions in plant cell growth in Arabidopsis and tobacco. Plant Cell, 20, 1330–1345.
He B, Guo W. 2009. The exocyst complex in polarized exocytosis. Current Opinion in Cell Biology, 21, 537–542.
He B, Xi F G, Zhang X Y, Zhang J, Guo W. 2007. Exo70 interacts with phospholipids and mediates the targeting of the exocyst to the plasma membrane. EMBO Journal, 26, 4053–4065.
Hiei Y, Komari T. 2008. Agrobacterium-mediated transformation of rice using immature embryos or calli induced from mature seed. Nature Protocols, 3, 824–834.
Hochholdinger F, Park W J, Sauer M, Woll K. 2004. From weeds to crops: Genetic analysis of root development in cereals. Trends in Plant Science, 9, 42–48.
Hou H N, Fang J B, Liang J H, Diao Z J, Wang W, Yang D W, Li S P, Tang D Z. 2020. OsExo70B1 positively regulates disease resistance to Magnaporthe oryzae in rice. International Journal of Molecular Sciences, 21, 7049.
Kulich I, Cole R, Drdová E, Cvrcková F, Soukup A, Fowler J, Zársky V. 2010. Arabidopsis exocyst subunits and exocyst interactor are involved in the localized deposition of seed coat pectin. New Phytologist, 188, 615–625.
Kulich I, Vojtíková Z, Glanc M, Ortmannová J, Rasmann S, Zársky V. 2015. Cell wall maturation of Arabidopsis trichomes is dependent on exocyst subunit EXO70H4 and involves callose deposition. Plant Physiology, 168, 120–131.
Li S P, Chen M, Yu D L, Ren S C, Sun S F, Liu L D, Ketelaar T, Emons A M C, Liu C M. 2013. EXO70A1-mediated vesicle trafficking is critical for tracheary element development in Arabidopsis. Plant Cell, 25, 1774–1786.
Liao Q, Shen J, Liu J F, Sun X, Zhao G G, Chang Y Z, Xu L T, Li X R, Zhao Y, Zheng H Q, Zhao Y, Wu Z D. 2014. Genome-wide identification and functional annotation of long noncoding RNAs from RNA-seq data. Parasitology Research, 113, 1269–1281.
Liu C C, Liu Y N, Cheng J F, Guo R, Tian L, Wang B. 2022. Dual roles of OsGH3.2 in modulating rice root morphology and affecting arbuscular mycorrhizal symbiosis. Frontiers in Plant Science, 13, 853435.
Liu C W, Breakspear A, Stacey N, Findlay K, Nakashima J, Ramakrishnan K, Liu M X, Xie F, Endre G, de Carvalho-Niebel F, Oldroyd G E D, Udvardi M K, Fournier J, Murray J D. 2019. A protein complex required for polar growth of rhizobial infection threads. Nature Communications, 10, 2848.
Love M I, Huber W, Anders S. 2014. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biology, 15, 11–21.
Markovic V, Cvrcková F, Potocky M, Kulich I, Pejchar P, Kollárová E, Synek L, Zársky V. 2020. EXO70A2 is critical for exocyst complex function in pollen development. Plant Physiology, 184, 1823–1839.
Mortazavi A, Williams B A, Mccue K, Schaeffer L, Wold B. 2008. Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nature Methods, 5, 621–628.
Ogura T, Goeschl C, Filiault D, Mirea M, Slovak R, Wolhrab B, Satbhai S B, Busch W. 2019. Root system depth in Arabidopsis is shaped by via the dynamic modulation of auxin transport. Cell, 178, 400–413.
Pecenková T, Hála M, Kulich I, Kocourková D, Drdová E, Fendrych M, Toupalová H, Zársky V. 2011. The role for the exocyst complex subunits Exo70B2 and Exo70H1 in the plant–pathogen interaction. Journal of Experimental Botany, 62, 2107–2116.
Rebouillat J, Dievart A, Verdeil J L, Escoute J, Giese G, Breitler J C, Gantet P, Espeout S, Guiderdoni E, Périn C. 2009. Molecular genetics of rice root development. Rice, 2, 15–34.
Redkar A, Sabale M, Zuccaro A, Di Pietro A. 2022. Determinants of endophytic and pathogenic lifestyle in root colonizing fungi. Current Opinion in Plant Biology, 67, 102226.
Robinson M D, Oshlack A. 2010. A scaling normalization method for differential expression analysis of RNA-seq data. Genome Biology, 11, 1–9.
Roth R, Chiapello M, Montero H, Gehrig P, Grossmann J, O’Holleran K, Hartken D, Walters F, Yang S Y, Hillmer S, Schumacher K, Bowden S, Craze M, Wallington E J, Miyao A, Sawers R, Martinoia E, Paszkowski U. 2018. A rice Serine/Threonine receptor-like kinase regulates arbuscular mycorrhizal symbiosis at the peri-arbuscular membrane. Nature Communications, 9, 4677.
Safavian D, Zayed Y, Indriolo E, Chapman L, Ahmed A, Goring D R. 2015. RNA silencing of exocyst genes in the stigma impairs the acceptance of compatible pollen in Arabidopsis. Plant Physiology, 169, 2526–2538.
Stegmann M, Anderson R G, Ichimura K, Pecenkova T, Reuter P, Žárský V, McDowell J M, Shirasu K, Trujillo M. 2012. The ubiquitin ligase PUB22 targets a subunit of the exocyst complex required for PAMP-triggered responses in Arabidopsis. The Plant Cell, 24, 4703–4716.
Su Y Y, Qi Y L, Cai L. 2012. Induction of sporulation in plant pathogenic fungi. Mycology, 3, 195–200.
Synek L, Pleskot R, Sekeres J, Serrano N, Vukasinovic N, Ortmannová J, Klejchová M, Pejchar P, Batystová K, Gutkowska M, Janková-Drdová E, Markovic V, Pecenkova T, Santrucek J, Zársky V, Potocky M. 2021. Plasma membrane phospholipid signature recruits the plant exocyst complex via the EX070A1 subunit. Proceedings of the National Academy of Sciences of the United States of America, 118, e2105287118.
Synek L, Schlager N, Eliás M, Quentin M, Hauser M T, Zársky V. 2006. AtEXO70A1, a member of a family of putative exocyst subunits specifically expanded in land plants, is important for polar growth and plant development. Plant Journal, 48, 54–72.
Synek L, Vukasinovic N, Kulich I, Hála M, Aldorfová K, Fendrych M, Zársky V. 2017. EXO70C2 is a key regulatory factor for optimal tip growth of pollen. Plant Physiology, 174, 223–240.
Tan X Y, Feng Y H, Liu Y L, Bao Y Q. 2016. Mutations in exocyst complex subunit gene impaired polar auxin transport and PIN protein recycling in primary root. Plant Science, 250, 97–104.
Vukasinovic N, Oda Y, Pejchar P, Synek L, Pecenková T, Rawat A, Sekeres J, Potocky M, Zársky V. 2017. Microtubule-dependent targeting of the exocyst complex is necessary for xylem development in Arabidopsis. New Phytologist, 213, 1052–1067.
Wang L, Ge T T, Peng H T, Wang C, Liu T K, Hou X L. 2013. Molecular cloning, expression analysis and localization of Exo70A1 related to self incompatibility in non-heading Chinese cabbage (Brassica campestris ssp. chinensis). Journal of Integrative Agriculture, 12, 2149–2156.
Wang M, Chen C, Xu Y Y, Jiang R X, Han Y, Xu Z H, Chong K. 2004. A practical vector for efficient knockdown of gene expression in rice (Oryza sativa L.). Plant Molecular Biology Reporter, 22, 409–417.
Wang W, Liu N, Gao C Y, Cai H R, Romeis T, Tang D Z. 2020. The Arabidopsis exocyst subunits EXO70B1 and EXO70B2 regulate FLS2 homeostasis at the plasma membrane. New Phytologist, 227, 529–544.
Xing Y D, Wang N, Zhang T Q, Zhang Q L, Du D, Chen X L, Lu X, Zhang Y Y, Zhu M D, Liu M M, Sang X C, Li Y F, Ling Y H, He G H. 2021. SHORT-ROOT 1 is critical to cell division and tracheary element development in rice roots. Plant Journal, 105, 1179–1191.
Yu G C, Wang L G, Han Y Y, He Q Y. 2012. clusterProfiler: An R package for comparing biological themes among gene clusters. Omics - A Journal of Integrative Biology, 16, 284–287.
Zhang X C, Pumplin N, Ivanov S, Harrison M J. 2015. EXO70I is required for development of a sub-domain of the periarbuscular membrane during arbuscular mycorrhizal symbiosis. Current Biology, 25, 2189–2195.
Zhao T, Rui L, Li J, Nishimura M T, Vogel J P, Liu N, Liu S M, Zhao Y F, Dangl J L, Tang D Z. 2015. A truncated NLR protein, TIR-NBS2, is required for activated defense responses in the exo70B1 mutant. PLoS Genetics, 11, e1004945.
|