Akino S, Gotoh K, Nishimura R, Maeda A, Naito S, Ogoshi A. 2004. Comparison of Chinese and Japanese A1 isolates of Phytophthora infestans. Journal of General Plant Pathology, 70, 212–214.
Armstrong M R, Whisson S C, Pritchard L, Bos J I B, Venter E, Avrova A O, Rehmany A P, Bohme U, Brooks K, Cherevach I, Hamlin N, White B, Frasers A, Lord A, Quail M A, Churcher C, Hall N, Berriman M, Huang S, Kamoun S, Beynon J L, Birch P R J. 2005. An ancestral oomycete locus contains late blight avirulence gene Avr3a, encoding a protein that is recognized in the host cytoplasm. Proceedings of the National Academy of Sciences of the United States of America, 102, 7766–7771.
Beninal L, Bouznad Z, Corbière R, Belkhiter S, Mabon R, Taoutaou A, Keddad A, Runno-Paurson E, Andrivon D. 2022. Distribution of major clonal lineages EU_13_A2, EU_2_A1, and EU_23_A1 of Phytophthora infestans associated with potato late blight across crop seasons and regions in Algeria. Plant Pathology, 71, 458–469.
Berindean I V, Taoutaou A, Rida S, Ona A D, Stefan M F, Costin A, Racz I, Muntean L. 2024. Modern breeding strategies and tools for durable late blight resistance in potato. Plants, 13, 1711.
Chen C H, Wang T C, Black L, Sheu Z M, Perez F, Deahl K. 2009. Phenotypic and genotypic changes in the Phytophthora infestans population in Taiwan-1991 to 2006. Journal of Phytopathology, 157, 248–255.
Chen H, Raffaele S, Dong S. 2021. Silent control: microbial plant pathogens evade host immunity without coding sequence changes. FEMS Microbiology Reviews, 45, 1–16.
Chmielarz M, Sobkowiak S, Debski K, Cooke D E L, Brurberg M B, Sliwka J. 2014. Diversity of Phytophthora infestans from Poland. Plant Pathology, 63, 203–211.
Chowdappa P, Kumar B J N, Madhura S, Kumar S P M, Myers K L, Fry W E, Cooke D E L. 2015. Severe outbreaks of late blight on potato and tomato in South India caused by recent changes in the population. Plant Pathology, 64, 191–199.
Cooke D E L, Cano L M, Raffaele S, Bain R A, Cooke L R, Etherington G J, Deahl K L, Farrer R A, Gilroy E M, Goss E M, Grunwald N J, Hein I, MacLean D, McNicol J W, Randall E, Oliva R F, Pel M A, Shaw D S, Squires J N, Taylor M C, Vleeshouwers V G A A, Birch P R J, Lees A K, Kamoun S. 2012. Genome analyses of an aggressive and invasive lineage of the Irish potato famine pathogen. PLoS Pathogens, 8, e1002940.
Cooke D E L, Lees A K. 2004. Markers, old and new, for examining Phytophthora infestans diversity. Plant Pathology, 53, 692–704.
Cooke D E L, Lees A K, Shaw D S, Taylor M, Prentice M W C, Bradshaw N J, Bain R A, Schepers H T A M. 2007. Survey of GB blight populations. PPO Special Report, 12, 145–152.
Dong S M, Zhou S Q. 2022. Potato late blight caused by Phytophthora infestans: From molecular interactions to integrated management strategies. Journal of Integrative Agriculture, 21, 3456–3466.
Elansky S, Smirnov A, Dyakov Y, Dolgova A, Filippov A, Kozlovsky B, Kozlovskaya I, Russo P, Smart C, Fry W. 2001. Genotypic analysis of Russian isolates of Phytophthora infestans from the Moscow region, Siberia and Far East. Journal of Phytopathology, 149, 605–611.
FAOSTAT. 2020. Food and agriculture organization of the united nations. Available at: http://www.fao.org/faost at/en/#data/QC.
Fry W E. 2016. Phytophthora infestans: New Tools (and old ones) lead to new understanding and precision management. Annual Review of Phytopathology, 54, 529–547.
Fry W E. 2020. Phytophthora infestans: the itinerant invader; "late blight": the persistent disease. Phytoparasitica, 48, 87–94.
Fry W E, McGrath M T, Seaman A, Zitter T A, McLeod A, Danies G, Small I M, Myers K, Everts K, Gevens A J, Gugino B K, Johnson S B, Judelson H, Ristaino J, Roberts R, Secor G, Seebold K, Snover-Clift K, Wyenandt A, Grünwald N J, Smart C D. 2013. The 2009 late blight pandemic in the eastern United States - Causes and Results. Plant Disease, 97, 296–306.
Gilroy E M, Breen S, Whisson S C, Squires J, Hein I, Kaczmarek M, Turnbull D, Boevink P C, Lokossou A, Cano L M, Morales J, Avrova A O, Pritchard L, Randall E, Lees A, Govers F, van West P, Kamoun S, Vleeshouwers V G A A, Cooke D E L, Birch P R J. 2011. Presence/absence, differential expression and sequence polymorphisms between PiAVR2 and PiAVR2-like in Phytophthora infestans determine virulence on R2 plants. New Phytologist, 191, 763–776.
Guo J, Lee T D, Qu D Y, Yao Y Q, Gong X F, Liang D L, Xie K Y, Wang X W, Govers F. 2009. Phytophthora infestans isolates from Northern China show high virulence diversity but low genotypic diversity. Plant Biology, 11, 57–67.
Guo J Q, D. Y., Gong, Y. F., Yao, Y. Q., Liang, D. L., Kang, Z. S. 2007. Investigation of mating type and physiological race of Phytophthora infestans from Inner Mongolia (in Chinese). Journal of Northwest A & F University, 35, 120–124.
Guo L Y, Zhu X Q, Hu C H, Ristaino J B. 2010. Genetic structure of populations in China indicates multiple migration events. Phytopathology, 100, 997–1006.
Hadiarto T, Ambarwati A D. 2024. Breeding of genetically engineered Indonesian Potato, Bio Granola, resistant to late blight pathogen. Potato Research, 67, 695–709.
Han M, Liu G, Li J P, Govers F, Zhu X Q, Shen C Y, Guo L Y. 2013. Phytophthora infestans field isolates from Gansu Province, China are genetically highly diverse and show a high frequency of self fertility. Journal of Eukaryotic Microbiology, 60, 79–88.
Jackson S A, Hanneman R E. 1999. Crossability between cultivated and wild tuber- and non-tuber-bearing Solanums. Euphytica, 109, 51–67.
Jansky S H, Jin L P, Xie K Y, Xie C H, Spooner D M. 2009. Potato production and breeding in China. Potato Research, 52, 57–65.
Jin G H, Lv, W. H., Bai, Y. Z., Wen, J. Z., Sun, X. M., Tai, L. M., Ma, Y. L., Jin, X. H. 2009. Identification of the physiological race of Phytophthora infestans isolates collected from potato in Heilongjiang province (in Chinese). Journal of Northeast Agricultural University, 40, 13–17.
Jombart T. 2008. Adegenet: A R package for the multivariate analysis of genetic markers. Bioinformatics, 24, 1403–1405.
Jyan M H, Ann P J, Tsai J N, Hsih S D, Chang T T, Liou R F. 2004. Recent occurrence of Phytophthora infestans US-11 as the cause of severe late blight on potato and tomato in Taiwan. Canadian Journal of Plant Pathology, 26, 188–192.
Kamvar Z N, Tabima J F, Grünwald N J. 2014. Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction. PeerJ, 2, e281.
Kim H J, Lee H R, Jo K R, Mortazavian S M M, Huigen D J, Evenhuis B, Kessel G, Visser R G F, Jacobsen E, Vossen J H. 2012. Broad spectrum late blight resistance in potato differential set plants MaR8 and MaR9 is conferred by multiple stacked genes. Theoretical and Applied Genetics, 124, 923–935.
Knapova G, Gisi U. 2002. Phenotypic and genotypic structure of Phytophthora infestans populations on potato and tomato in France and Switzerland. Plant Pathology, 51, 641–653.
Lees A K, Wattier R, Shaw D S, Sullivan L, Williams N A, Cooke D E L. 2006. Novel microsatellite markers for the analysis of populations. Plant Pathology, 55, 311–319.
Li B J, Lv X, Chen Q H, Lan C Z, Zhao J, Qiu R Z, Weng Q Y. 2009. Population genetic diversity of Phytophthora infestans from China as revealed by SSRs and RAPDs. Chinese Journal of Agricultural Biotechnology, 6, 10.
Li H H, Shang J, Zhang H, Liu B W, Peng Y L, Huang Y. 2020. Phenotypic characterization of Phytophthora infestans population in southwestern China. International Journal of Agriculture and Biology, 23, 1129–1135.
Li Y, Colleoni C, Zhang J, Liang Q, Hu Y, Ruess H, Simon R, Liu Y, Liu H, Yu G, Schmitt E, Ponitzki C, Liu G, Huang H, Zhan F, Chen L, Huang Y, Spooner D, Huang B. 2018. Genomic analyses yield markers for identifying agronomically important genes in potato. Molecular Plant, 11, 473–484.
Li Y, Cooke D E L, Jacobsen E, van der Lee T. 2013a. Efficient multiplex simple sequence repeat genotyping of the oomycete plant pathogen. Journal of Microbiological Methods, 92, 316–322.
Li Y, van der Lee T, Zhu J H, Jin G H, Lan C Z, Zhu S X, Zhang R F, Liu B W, Zhao Z J, Kessel G, Huang S W, Jacobsen E. 2013b. Population structure of Phytophthora infestans in China - geographic clusters and presence of the EU genotype Blue_13. Plant Pathology, 62, 932–942.
Li Y, van der Lee T A J, Evenhuis A, van den Bosch G B M, van Bekkum P J, Förch M G, van Gent-Pelzer M P E, van Raaij H M G, Jacobsen E, Huang S W, Govers F, Vleeshouwers V G A A, Kessel G J T. 2012. Population dynamics of Phytophthora infestans in the Netherlands reveals expansion and spread of dominant clonal lineages and virulence in sexual offspring. G3 (Bethesda), 2, 1529–1540.
Naumann M, Koch M, Thiel H, Gransee A, Pawelzik E. 2020. The importance of nutrient management for potato production part II: Plant nutrition and tuber quality. Potato Research, 63, 121–137.
Nowicki M, Fooled M R, Nowakowska M, Kozik E U. 2012. Potato and tomato late blight caused by Phytophthora infestans: An overview of pathology and resistance breeding. Plant Disease, 96, 4–17.
O’Beirne R. 2000. Mapping the great Irish famine: A survey of the famine decades. Reference Reviews, 14, 11–12.
Pais M, Yoshida K, Giannakopoulou A, Pel M A, Cano L M, Oliva R F, Witek K, Lindqvist-Kreuze H, Vleeshouwers V G A A, Kamoun S. 2018. Gene expression polymorphism underpins evasion of host immunity in an asexual lineage of the Irish potato famine pathogen. BMC Evolutionary Biology, 18, 93.
Paluchowska P, Sliwka J, Yin Z M. 2022. Late blight resistance genes in potato breeding. Planta, 255, 127.
Paradis E. 2010. Pegas: An R package for population genetics with an integrated-modular approach. Bioinformatics, 26, 419–420.
Roy S G, Dey T, Cooke D E L, Cooke L R. 2021. The dynamics of Phytophthora infestans populations in the major potato-growing regions of Asia - A review. Plant Pathology, 70, 1015–1031.
Tang D, Jia Y, Zhang J, Li H, Cheng L, Wang P, Bao Z, Liu Z, Feng S, Zhu X, Li D, Zhu G, Wang H, Zhou Y, Zhou Y, Bryan G J, Buell C R, Zhang C, Huang S. 2022. Genome evolution and diversity of wild and cultivated potatoes. Nature, 606, 535–541.
Thilliez G J A, Armstrong M R, Lim T-Y, Baker K, Jouet A, Ward B, van Oosterhout C, Jones J D G, Huitema E, Birch P R J, Hein I. 2019. Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes. New Phytologist, 221, 1634–1648.
Tian Y E, Yin J L, Sun J P, Ma Y F, Wang Q H, Quan J L, Shan W X. 2016. Population genetic analysis of Phytophthora infestans in northwestern China. Plant Pathology, 65, 17–25.
van Poppel P M J A, Guo J, de Vondervoort P J I V, Jung M W M, Birch P R J, Whisson S C, Govers F. 2008. The Phytophthora infestans avirulence gene Avr4 encodes an RXLR-dEER effector. Molecular Plant-Microbe Interactions, 21, 1460–1470.
VanderLee T, DeWitte I, Drenth A, Alfonso C, Govers F. 1997. AFLP linkage map of the oomycete Phytophthora infestans. Fungal Genetics and Biology, 21, 278–291.
Vleeshouwers V G A A, Oliver R P. 2014. Effectors as tools in disease resistance breeding against biotrophic, hemibiotrophic, and necrotrophic plant pathogens. Molecular Plant-Microbe Interactions, 27, 196–206.
Vleeshouwers V G A A, Raffaele S, Vossen J H, Champouret N, Oliva R, Segretin M E, Rietman H, Cano L M, Lokossou A, Kessel G, Pel M A, Kamoun S. 2011. Understanding and exploiting late blight resistance in the age of effectors. Annual Review of Phytopathology, 49, 507–531.
Wang J, Zhou Y, Su W, Wang F, Guo H C. 2023a. Potato production in China. Potato Production Worldwide, 331–340.
Wang L, Zhao F, Liu H, Chen H, Zhang F, Li S, Sun T, Nekrasov V, Huang S, Dong S. 2023b. A modified Agrobacterium-mediated transformation for two oomycete pathogens. PLoS Pathogens, 19, e1011346.
Wu M, Cheng Y, Jiang C X, Zhang M S, Shi T, Zhao C. 2024. Phylogeography of Morella nana: The Wumeng Mountains as a natural geographical isolation boundary on the Yunnan-Guizhou Plateau. Ecology and Evolution, 14, e11566.
Yang L, Wang, Y., Wu, S. P. 2019. Genetic diversity analysis of Phytophthora infestans population in Guizhou province (in Chinese). Guizhou Agricultural Sciences, 47, 64–67.
Yang Q, Zheng, Z., Li, Y., Yang, Y. H., Li, H. X., Xie, B. Y. 2016. An analysis on phenotypic and genotypic variation of Phytophthora infestans in Sichuan Province (in Chinese). Mycosystema, 35, 52–62.
Yang Y L, Hu, X. Q., Lu, S. F., Luo, W. F., Ryuky, Xiao, L. T. 2007. Composition and distribution of physiological race of Phytophthora infestans in Yunnan province (in Chinese). Journal of Huazhong Agricultural University, 26, 297–301.
Yin J L, Gu B, Huang G Y, Tian Y, Quan J L, Lindqvist-Kreuze H, Shan W X. 2017. Conserved RxLR effector genes of Phytophthora infestans expressed at the early stage of potato infection are suppressive to host defense. Frontiers in Plant Science, 8, 2155.
Yoshida K, Schuenemann V J, Cano L M, Pais M, Mishra B, Sharma R, Lanz C, Martin F N, Kamoun S, Krause J, Thines M, Weigel D, Burbano H A. 2013. The rise and fall of the Phytophthora infestans lineage that triggered the Irish potato famine. eLife, 2, e00731.
Zhang F, Chen H, Zhang X, Gao C, Huang J, Lü L, Shen D, Wang L, Huang C, Ye W, Zheng X, Wang Y, Vossen J H, Dong S. 2021. Genome analysis of two newly emerged potato late blight isolates sheds light on pathogen adaptation and provides tools for disease management. Phytopathology, 111, 96–107.
Zhao Z J, Li, C. H., Cao, J. F., Sun, D. W., Yang, M. J., Wang, J. 2007. Study on the virulence genes and virulence structure of Phytophthora infestans on Yunnan potato (in Chinese). Scientia Agricultura Sinica, 10, 505–511.
Zhu S X, Li Y, Vossen J H, Visser R G F, Jacobsen E. 2012. Functional stacking of three resistance genes against Phytophthora infestans in potato. Transgenic Research, 21, 89–99.
Zhu S X, Vossen J H, Bergervoet M, Nijenhuis M, Kodde L, Kessel G J T, Vleeshouwers V, Visser R G F, Jacobsen E. 2015a. An updated conventional- and a novel GM potato late blight R gene differential set for virulence monitoring of Phytophthora infestans. Euphytica, 202, 219–234.
Zhu W, Yang L N, Wu E J, Qin C F, Shang L P, Wang Z H, Zhan J S. 2015b. Limited sexual reproduction and quick turnover in the population genetic structure of in Fujian, China. Scientific Reports, 5, 2045–2322.
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