| Altschul S F, Gish W, Miller W, Myers E W, Lipman D J. 1990. Basic local alignment search tool. Journal of Molecular Biology, 215, 403–410.Altschul S F, Madden T L, Schäffer A A, Zhang J, Zhang Z, Miller W, Lipman D J. 1997. Gapped BLAST and PSI-BLAST: A new generation ofprotein database search programs. Nucleic Acids Research, 25, 3389–3402.Ashikawa I, Hayashi N, Yamane H, Kanamori H, Wu J, Matsumoto T, Ono K, Yano M. 2008. Two adjacent nucleotide-binding site-leucine-rich repeat class genes are required to confer Pikm-specific rice blast resistance.Genetics, 180, 2267–2276.Ashkani S, Yusop M R, Shabanimofrad M, Azadi A, Ghasemzadeh A, Azizi1 P, Latif M A. 2015. Allele mining strategies: Principles and utilisation for blast resistance genes in rice (Oryza sativa L.). Current Issues in Molecular Biology, 17, 57–74.Bonman J M, Khush G S, Nelson R J. 1992. Breeding rice for resistance to pests. Annual Review of Phytopathology, 30, 507–528.Bryan G T, Wu K S, Farrall L, Jia Y, Hershey H P, McAdams S A, Valent B. 2000. A single amino acid difference distinguishes resistant and susceptible alleles of the rice blast resistance gene Pita. The Plant Cell, 12, 2033–2045.Chuma I, Isobe C, Hotta Y, Ibaragi K, Futamata N, Kusaba M, Yoshida K, Terauchi R, Fujita Y, Nakayashiki H. 2011. Multiple translocation of the Avr-Pita effector gene among chromosomes of the rice blast fungus Magnaporthe oryzae and related species. PLoS Pathogen, 7, e1002147.Costanzo S, Yu L J. 2010. Sequence variation at the rice blast resistance gene Pikm locus: Implications for the development of allele specific markers. Plant Science, 178, 523–530.Gish W, States D J. 1993. Identification of protein coding regions by database similarity search. Nature Genetics, 3, 266–272.Hayashi N, Kobayashi N, Cruz C, Fukuta Y. 2009. Protocols for the sampling of diseased specimens and evaluation of blast disease in rice. Japan International Research Center for Agricultural Sciences Working Report, 63, 17–33.Jiang N, Wang S H, Li Z Q, Wen T, Liang Y, Wu J, Yang T T, Dai L Y, Wang G L, Liu X L. 2012. Analysis of the antimicrobial spectrum of three rice blast resistance genes at Pi2/9 locus and genetic diversity of rice blast strains. Journal of Hunan Agricultural University, 38, 506–510. (in Chinese)Jia Y L, McAdams S A, Bryan G T, Hershey H P, Valent B. 2000. Direct interaction of resistance gene and avirulence gene products confers rice blast resistance. The EMBO Journal, 19, 4004–4014.Kanzaki H, Yoshida K, Saitoh H, Fujisaki K, Hirabuchi A, Alaux L, Fournier E, Tharreau D, Terauchi R. 2012. Arms race co-evolution of Magnaporthe oryzae Avr-Pik and rice Pik genes driven by their physical interactions. The Plant Journal, 72, 894–907.Kiyosawa S. 1972. Genetics of blast resistance. Rice Breeding, 203–225.Li J B, Lu L, Jia Y, Li C. 2014. Effectiveness and durability of the rice Pita gene in yunnan province of China. Phytopathology, 104, 762–768.Liu W D, Liu J L, Triplett L, Leach J E, Wang G L. 2014. Novel insights into rice innate immunity against bacterial and fungal pathogens. Annual Review of Phytopathology, 52, 213–241.McCouch S R, Nelson R J, Tohme J, Zeigler R S. 1994. Mapping of blast resistance genes in rice. Rice Blast Disease, 167.Qu S, Liu G, Zhou B, Bellizzi M, Zeng L, Dai L, Wang G L. 2006. The broad-spectrum blast resistance gene Pi9 encodes a nucleotide-binding site-leucine-rich repeat protein and is a member of a multigene family in rice. Genetics, 172, 1901–1914.Ramkumar G, Madhav M, Rama S, Devi, P, Mohan K, Prasad M, Viraktamath B. 2014. Nucleotide diversity of Pita a major blast resistance gene and identification of its minimal promoter. Gene, 546, 250–256.Saghai-Maroof M A, Soliman K M, Jorgensen R A, Allard R W. 1994. Ribosomal DNA spacer-length polymorphisms in barley: Mendelian inheritance, chromosomal location, and population dynamics. Proceedings of the National Academy of Sciences of the United States of America, 81, 8014–8018.Silue D, Notteghem J L, Tharreau D. 1992. Evidence for a gene for gene relationship in the Oryza sativa-Magnaporthe grisea pathosystem. Phytopathology, 82, 577–582.Terauchi R, Yoshida K, Saitoh H, Kanzaki H, Okuyama Y, Fujisaki K, Miya A, Abe A, Tamiru M, Tosa Y. 2011. Studying genome-wide DNA polymorphisms to understand Magnaporthe-rice interactions. Australian Plant Pathology, 40, 328–334.Thakur S, Gupta Y K, Singh P K, Rathour R, Variar M, Prashanthi S K, Singh A K, Singh U D, Chand D, Rana J C, Singh N K, Sharma T R. 2013. Molecular diversity in rice blast resistance gene Pita makes it highly effective against dynamic population of Magnaporthe oryzae. Functinoal Integrative Genomics, 13, 309–322.Thompson J D, Gibson T J, Plewniak F, Jeanmougin F, Higgins D G. 1997. The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research, 25, 4876–4882.Valent B, Khang C H. 2010. Recent advances in rice blast effector research. Current Opinion Plant Biology, 13, 434–441.Wang S W, Zheng W J, Zhao J M, Wei S H, Wang Y, Zhao B H, Liu Z H. 2014. Analyzing and Identification to the Avr-genes of prevalent Magnaporthe grisea from Liaoning province. Scientia Agricultura Sinica, 47, 462–472. (in Chinese)Wu W H, Wang L, Zhang S, Li Z K, Zhang Y, Lin F, Pan Q H. 2014. Stepwise arms race between Avr-Pik and Pik alleles in the rice blast pathosystem. Molecular Plant-microbe Interactions, 27, 759–769.Zhou B, Qu S, Liu G, Dolan M, Sakai H, Lu G, Wang G L. 2006. The eight amino-acid differences within three leucine-rich repeats between Pi2 and Piz-t resistance proteins determine the resistance specificity to Magnaporthe grisea. Molecular Plant-Microbe Interactions, 19, 1216–1228. |
