Genetic Analysis and Mapping of an Enclosed Panicle Mutant Locus esp1 in Rice (Oryza sativa L.)

doi:10.1016/S1671-2927(00)8729

Journal of Integrative Agriculture ›› 2012, Vol. 12 ›› Issue (12): 1933-1939.DOI: 10.1016/S1671-2927(00)8729

• 论文 • 下一篇

Genetic Analysis and Mapping of an Enclosed Panicle Mutant Locus esp1 in Rice (Oryza sativa L.)

DUAN Yuan-lin, GUAN Hua-zhong, ZHUO Ming, CHEN Zhi-wei, LI Wen-tao, PAN Run-sen, MAO Da-mei, ZHOU Yuan-chang, WU Wei-ren

1.Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education/Fujian Agricultural and Forestry University,Fuzhou 350002, P.R.China
2.Fujian Provincial Key Laboratory of Marker-Assisted Breeding of Rice/Fujian Agriculture and Forestry University, Fuzhou 350002, P.R.China

收稿日期:2011-03-24 出版日期:2012-12-01 发布日期:2012-12-18
通讯作者: Correspondence WU Wei-ren, Tel: +86-591-83789176, E-mail: wuwr@fjau.edu.cn
作者简介:DUAN Yuan-lin, Tel: +86-591-83789338, E-mail: ylduan863@163.com
基金资助:
This work was supported by the National Transgenic Projects of China (2009ZX-08009-109B), the Natural Science Foundation of Fujian Province, China (2012J01091) and the New Century Excellent Talents in University of Fujian Province, China (KY0010057).

Genetic Analysis and Mapping of an Enclosed Panicle Mutant Locus esp1 in Rice (Oryza sativa L.)

DUAN Yuan-lin, GUAN Hua-zhong, ZHUO Ming, CHEN Zhi-wei, LI Wen-tao, PAN Run-sen, MAO Da-mei, ZHOU Yuan-chang, WU Wei-ren

1.Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education/Fujian Agricultural and Forestry University,Fuzhou 350002, P.R.China
2.Fujian Provincial Key Laboratory of Marker-Assisted Breeding of Rice/Fujian Agriculture and Forestry University, Fuzhou 350002, P.R.China

Received:2011-03-24 Online:2012-12-01 Published:2012-12-18
Contact: Correspondence WU Wei-ren, Tel: +86-591-83789176, E-mail: wuwr@fjau.edu.cn
About author:DUAN Yuan-lin, Tel: +86-591-83789338, E-mail: ylduan863@163.com
Supported by:
This work was supported by the National Transgenic Projects of China (2009ZX-08009-109B), the Natural Science Foundation of Fujian Province, China (2012J01091) and the New Century Excellent Talents in University of Fujian Province, China (KY0010057).

摘要/Abstract

摘要： A mutant was isolated from the M2 of 60Co-g ray mutagenized male-fertility restorer line Zao-R974 in rice. The mutant showed pleiotropic phenotypes including dwarfism, delayed heading time, short and partially enclosed panicles, short uppermost internode, decreased grain and secondary branch numbers per panicle, and partially degenerated spikelets. The mutant was named as esp1 (enclosed shorter panicle 1). Genetic analysis indicated that the mutant phenotype was controlled by a recessive locus. Spraying exogenous GA3 did not rescue the panicle enclosure. Using an F2 and a BC1 population of the cross between esp1 and a japonica cultivar Nipponbare, we mapped the ESP1 locus to a region of ~260 kb on chromosome 11. This result provides a basis for further map-based cloning of the ESP1 locus.

关键词: rice, panicle enclosure, esp1, genetic analysis, fine mapping

Abstract: A mutant was isolated from the M2 of 60Co-g ray mutagenized male-fertility restorer line Zao-R974 in rice. The mutant showed pleiotropic phenotypes including dwarfism, delayed heading time, short and partially enclosed panicles, short uppermost internode, decreased grain and secondary branch numbers per panicle, and partially degenerated spikelets. The mutant was named as esp1 (enclosed shorter panicle 1). Genetic analysis indicated that the mutant phenotype was controlled by a recessive locus. Spraying exogenous GA3 did not rescue the panicle enclosure. Using an F2 and a BC1 population of the cross between esp1 and a japonica cultivar Nipponbare, we mapped the ESP1 locus to a region of ~260 kb on chromosome 11. This result provides a basis for further map-based cloning of the ESP1 locus.

Key words: rice, panicle enclosure, esp1, genetic analysis, fine mapping

DUAN Yuan-lin, GUAN Hua-zhong, ZHUO Ming, CHEN Zhi-wei, LI Wen-tao, PAN Run-sen, MAO Da-mei, ZHOU Yuan-chang, WU Wei-ren. Genetic Analysis and Mapping of an Enclosed Panicle Mutant Locus esp1 in Rice (Oryza sativa L.)[J]. Journal of Integrative Agriculture, 2012, 12(12): 1933-1939.

参考文献

[1]Duan Y L, Wu W R, Zhang D F, Liu H Q, Zhou Y C, Pan RS, Lin L H, Chen Z W, Guan H Z, Mao D M, et al. 2003.Genetic analysis and gene mapping of leafy head (lhd),a mutant blocking the differentiation of rachis brandiesin rice (Oryza sativa L.). Chinese Science Bulletin, 48,2201-2205.

[2]Guan H Z, Duan Y L, Liu H Q, Chen Z W, Zhuo M, ZhuangL J, Qi W M, Pan R S, Mao D M, Zhou Y C, et al. 2011.Genetic analysis and fine mapping of an enclosedpanicle mutant esp2 in rice (Oryza sativa L.). ChineseScience Bulletin, 56, 1476-1480.

[3]Goff S A, Ricke D, Lan T H, Presting G, Wang R L, Dunn M,Glazebrook J, Sessions A, Oeller P, Varma H, et al002E 2002.A draft sequence of the rice genome (Oryza sativa L.ssp. japonica). Science, 296, 92-100.

[4]Heu M H, Shretha G. 1986. Genetic analysis of sheathedpanicle in a Nepalese rice cultivar gamadi. In: RiceGenetics Symposium. IRRI, Manila, Philippines. pp. 317-322.

[5]Hidehiko S, Hikaru S, Yasuo N. 2003. Mutations in panicledevelopment affect culm elongation in rice. BreedingScience, 53, 109-117.

[6]Kinoshita T. 1990. Report of the committee on genesymbolization, nomenclature and linkage groups. RiceGenetics Newsletter, 7, 16-50.

[7]Lander E S, Green P, Abrahamson J, Barlow A, Daly M J,Linclon S E, Newburg L. 1987. MAPMAKER: Aninteractive computer package for constructing primarygenetic linkage maps of experimental and naturalpopulations. Genomics, 1, 174-181.

[8]Li A X, Li Z H, Ding K X, Yan G H. 1995. Measures forpreventing and controlling kernel smut in hybrid riceseed production. Jiangsu Agriculture Science, 4, 34-36. (in Chinese)

[9]Liu Z, Luo L J. 2006. Anatomical studies on the stem of riceof dwarf and sheathed panicle. Chinese AgricultureScience Bulletin, 22, 409-412.

[10](in Chinese)Lu Z M, Hong D L. 1999. Advances in hybrid rice seedproduction techniques. In: Amarjit S, Basra, eds.,Heterosis and Hybrid Seed Production in AgronomicCrops. Food Products Press-an Imprint of the HaworthPress, Incorporated, New York. pp. 65-79.

[11]Ma H L, Zhang S B, Ji L, Zhu H B, Yang S L, Fang X J, YangR C. 2006. Fine mapping and in silico isolation of theEUI1 gene controlling upper internode elongation inrice. Plant Molecular Biology, 60, 87-94.

[12]Maekawa M. 1986. Allelism test for the genes responsible forsheathed panicle. Rice Genetics Newsletter, 3, 62-63.

[13]Maekawa M, Inukai T. 1992. Genes linked with d-2 in rice.Japanese Journal of Breeding, 42, 212-213.

[14]Michelmore RW, Paran I, Kesseli R V. 1991. Identification ofmarkers linked to disease-resistance genes by bulkedsegregant analysis: a rapid method to detect markers inspecific genomic regions by using segregatingpopulations. Proceeding of the National Academy ofSciences of the United States of America, 88, 9828-9832.

[15]Shen Z T, Yang C D, He Z H. 1987. Studies on eliminatingpanicle enclosure in WAType MS line of rice (Oryzasativa subsp. indica). Journal of Chinese Rice Science,1, 95-99.

[16](in Chinese)Shrestha G L. 1984. Gene location for “Gamadiness” in rice(Oryza sativa L.). Korean Journal of Crop Science(Korea R.), 29, 128-135.

[17]Virmani S S, Dalmacio R D, Lopez M T. 1988. EUI gene forelongated uppermost internode transferred to indicarice. International Rice Research Newsletter, 13, 6-9.

[18]Wang W P, Zhu F Z, Tang L, Chen L Y, Wu X J. 2008.Discovery and preliminary analysis of a rice mutantwith fully sheathed panicle. Chinese AgriculturalScience Bulletin, 24, 212-216. (in Chinese)

[19]Wu K. 2009. Genetic analysis and mapping of a dwarf andsheathed panicle mutant dsp1 in rice (Oryza sativa L.),MSc thesis, Yangzhou University, Jiangsu. (in Chinese)Xiao H H, ZhongWH, LiangM Z, XuM L, Chen L B. 2005.Effect of temperature on the eui gene expression ofTGMS rice. Scientia Agricultura Sinica, 38, 222-227.(in Chinese)

[20]Yang R C, Zhang S B, Huang R H, Yang S R, Zhang Q Q.2002. Breeding technology of eui-hybrids of rice.Scientia Agricultura Sinica, 4, 359-363. (in Chinese)

[21]Zhu H B. 2003. Fine mapping and cloning of rice EUI2(t)gene controlling upper most internode elongation. Ph Dthesis, Fujian Agriculture and Forestry University,Fujian. (in Chinese)

[22]Zhu K M. 2006. Genetic analysis and mapping of SHP6gene in rice. MSc thesis, Yangzhou University, Jiangsu.(in Chinese)

[23]Zhu L, Hu J, Zhu K, Fang Y, Gao Z, He Y, Zhang G, Guo L,Zeng D, Dong G, et al. 2011. Identification andcharacterization of SHORTENED UPPERMOSTINTERNODE 1, a gene negatively regulating uppermostinternode elongation in rice. Plant Molecular Biology,77, 475-487.

Genetic Analysis and Mapping of an Enclosed Panicle Mutant Locus esp1 in Rice (Oryza sativa L.)

Genetic Analysis and Mapping of an Enclosed Panicle Mutant Locus esp1 in Rice (Oryza sativa L.)

PDF

可视化

摘要/Abstract

引用本文

使用本文

参考文献

相关文章 15

编辑推荐

Metrics

[1]	RONG Rui-juan, WU Peng-cheng, LAN Jin-ping, WEI Han-fu, WEI Jian, CHEN Hao, SHI Jia-nan, HAO Yu-jie, LIU Li-juan, DOU Shi-juan, LI Li-yun, WU Lin, LIU Si-qi, YIN Chang-cheng, LIU Guo-zhen. Western blot detection of PMI protein in transgenic rice[J]. Journal of Integrative Agriculture, 2016, 15(4): 726-734.
[2]	Elsheikh Y M Ahmed, ZHANG Yan-pei, YU Jian-ping, Rashid M A Rehman, ZHANG Hong-l. Mapping of three QTLs for seed setting and analysis on the candidate gene for qSS-1 in rice (Oryza sativa L.)[J]. Journal of Integrative Agriculture, 2016, 15(4): 735-743.
[3]	CHE Sheng-guo, ZHAO Bing-qiang, LI Yan-ting, YUAN Liang, LIN Zhi-an, HU Shu-wen, SHEN Bing. Nutrient uptake requirements with increasing grain yield for rice in China[J]. Journal of Integrative Agriculture, 2016, 15(4): 907-917.
[4]	LI Gang-hua, CHEN Yi-lu, DING Yan-feng, GENG Chun-miao, LI Quan, LIU Zheng-hui, WANG Shao-hua, TANG She. Charactering protein fraction concentrations as influenced by nitrogen application in low-glutelin rice cultivars[J]. Journal of Integrative Agriculture, 2016, 15(3): 537-544.
[5]	LIU Jing-na, ZHU Bo, YI Li-xia, DAI Hong-cui, XU He-shui, ZHANG Kai, HU Yue-gao, ZENG Zhao-hai. Winter cover crops alter methanotrophs community structure in a double-rice paddy soil[J]. Journal of Integrative Agriculture, 2016, 15(3): 553-565.
[6]	ZENG Yan-hua, ZAHNG Yu-ping, XIANG Jing, WU Hui, CHEN Hui-zhe, ZHANG Yi-kai, ZHU De-feng. Effects of chilling tolerance induced by spermidine pretreatment on antioxidative activity, endogenous hormones and ultrastructure of indica-japonica hybrid rice seedlings[J]. Journal of Integrative Agriculture, 2016, 15(2): 295-308.
[7]	QIU Cai-ling, ZHANG Zhi-xiang, LI Shi-fang, BAI Yan-ju, LIU Shang-wu, FAN Guo-quan, GAO Yan-ling, ZHANG Wei, ZHANG Shu, Lü Wen-he, Lü Dian-qiu. Occurrence and molecular characterization of Potato spindle tuber viroid (PSTVd) isolates from potato plants in North China[J]. Journal of Integrative Agriculture, 2016, 15(2): 349-363.
[8]	GAO Xuan, ZHU Xu-dong, FANG Na, DUAN Peng-gen, WU Ying-bao, LUO Yue-hua, LI Yun-hai. Identification of QTLs for grain size and characterization of the beneficial alleles of grain size genes in large grain rice variety BL129[J]. Journal of Integrative Agriculture, 2016, 15(1): 1-9.
[9]	WEI Huan-he, LI Chao, XING Zhi-peng, WANG Wen-ting, DAI Qi-gen, ZHOU Gui-shen, WANG Li, XU Ke, HUO Zhong-yang, GUO Bao-wei, WEI Hai-yan, ZHANG Hong-cheng. Suitable growing zone and yield potential for late-maturity type of Yongyou japonica/indica hybrid rice in the lower reaches of Yangtze River, China[J]. Journal of Integrative Agriculture, 2016, 15(1): 50-62.
[10]	XIAO Gui-qing, ZHANG Hai-wen, LU Xiang-yang, HUANG Rong-feng. Characterization and mapping of a novel light-dependent lesion mimic mutant lmm6 in rice (Oryza sativa L.)[J]. Journal of Integrative Agriculture, 2015, 14(9): 1687-1696.
[11]	SONG Wen-en, CHEN Shi-bao, LIU Ji-fang, CHEN Li, SONG Ning-ning, LI Ning, LIU Bin. Variation of Cd concentration in various rice cultivars and derivation of cadmium toxicity thresholds for paddy soil by species-sensitivity distribution[J]. Journal of Integrative Agriculture, 2015, 14(9): 1845-1854.
[12]	David Norman. Transitioning from paternalism to empowerment of farmers in lowincome countries: Farming components to systems[J]. Journal of Integrative Agriculture, 2015, 14(8): 1490-1499.
[13]	CHEN Zhong-du, ZHANG Hai-lin, S Batsile Dikgwatlhe, XUE Jian-fu, QIU Kang-cheng, TANG Hai-ming, CHEN fu. Soil carbon storage and stratification under different tillage/ residue-management practices in double rice cropping system[J]. Journal of Integrative Agriculture, 2015, 14(8): 1551-1560.
[14]	JIANG Peng, XIE Xiao-bing, HUANG Min, ZHOU Xue-feng, ZHANG Rui-chun, CHEN Jia-na, WU Dan-dan, XIA Bing, XU Fu-xian, XIONG Hong, ZOU Ying-bin. Comparisons of yield performance and nitrogen response between hybrid and inbred rice under different ecological conditions in southern China[J]. Journal of Integrative Agriculture, 2015, 14(7): 1283-1294.
[15]	DENG Qi-de, YONG Ming-li, LI Dan-yang, LAI Chao-hui, CHEN Hong-ming, FAN Jing, HU Dong-wei. Survey and examination of the potential alternative hosts of Villosiclava virens, the pathogen of rice false smut, in China[J]. Journal of Integrative Agriculture, 2015, 14(7): 1332-1337.