基于纳米孔全长转录组数据完善东方蜜蜂微孢子虫的基因组注释

陈华枝,范元婵,蒋海宾,王杰,范小雪,祝智威,隆琦,蔡宗兵,郑燕珍,付中民,徐国钧,陈大福,郭睿

Improvement of Nosema ceranae Genome Annotation Based on Nanopore Full-Length Transcriptome Data

HuaZhi CHEN,YuanChan FAN,HaiBin JIANG,Jie WANG,XiaoXue FAN,ZhiWei ZHU,Qi LONG,ZongBing CAI,YanZhen ZHENG,ZhongMin FU,GuoJun XU,DaFu CHEN,Rui GUO

表1 东方蜜蜂微孢子虫参考基因组中10个基因的结构优化信息概要

Table 1 Summary of structural optimization of 10 genes in N. ceranae reference genome

基因ID Gene ID 基因位置 Gene locus 正负链 Plus and minus strand 末端 End 原位置 Original site 优化后位置 Optimized site Gene1175 NW_020169317.1:49652-50638 - 3′ 50341 50638 Gene326 NW_020169413.1:1478-3041 - 3′ 2683 3041 Gene503 NW_020169431.1:1208-2193 - 5′ 1461 1208 Gene503 NW_020169431.1:1208-2193 - 3′ 1634 2193 Gene1591 NW_020169298.1:96744-98975 + 5′ 96746 96744 Gene1591 NW_020169298.1:96744-98975 + 3′ 98671 98975 Gene588 NW_020169310.1:2436-3030 + 3′ 2741 3030 Gene350 NW_020169307.1:13073-18338 - 5′ 17277 13073 Gene36 NW_020169296.1: 54153-55245 - 5′ 54289 54153 Gene2363 NW_020169300.1:40046-41314 - 5′ 40510 40046