2017-2019年四川地区猪A群轮状病毒的分子流行病学调查
周群,陈小飞,阚蕊慈,李玉,曹慧,彭艳伶,张斌

Molecular Epidemiological Investigation of Porcine Group A Rotavirus in Sichuan from 2017 to 2019
Qun ZHOU,XiaoFei CHEN,RuiCi KAN,Yu LI,Hui CAO,YanLing PENG,Bin ZHANG
表3 RVA VP4 基因同源性分析
Table 3 RVA VP4 gene homology analysis
毒株
Strain
同源性最高的毒株
Strain with highest homology
国家及宿主
Country and host
年份
Year
同源性
Homology
SCMS-152,SCLZ-35,SCXC-83 A5-10(LC133517) 泰国/牛源Thailand/cow 1988 93.4%
15株P[6]型(SCGY)15 strains of P[6] (SCGY) GUB88(AB573872) 日本/猪源Japan/pig 2006 92.6%-98.6%
SCLJ-C18,SCLJ-C20,SCZY-165 R1207(LC389888) 斯里兰卡/人源Sri Lanka/human 2009 95.7%-98.6%
SCXC-89,SCXC-85,SCXC-84,SCRS-142,SCGY-192 CMP178(DQ536362) 泰国/猪源Thailand/pig 2008 94.5%-96.8%
SCYB-Y1,SCQL-54,SCQL-55,SCMS-71,SCDY-91 SCMY(MH320795) 中国/猪源China/pig 2018 79.1%-98.8%
SCLZ-FB FGP36(AB573878) 日本/猪源Japan/pig 2009 95.1%
SCSN-93,SCSN-94 LNCY(MF462324) 中国/猪源China/pig 2016 98.3%
SCYA-C7,SCRS-131,SCLS-18,SCLS-20,
SCYA-H2,SCYA-H3,SCXC-90,SCYB-Y2
SWU-1C(MK410284) 中国/猪源China/pig 2018 92.5%-97.7%
SCDY-210,SCSN-140,SCMS-151 SCLS-R3(MK597985) 中国/人源China/human 2018 92.6%-97.0%
SCYB-C2,SCYB-C3 14175-24(KX363359) 越南/猪源Viet Nam/pig 2012 95.3%
SCSN-96 SC11(MH624176) 中国/猪源China/pig 2017 97.4%
SCMS-153,SCMS-68,SCMS-69,SCDY-211,
7株P[23]型(SCJY)7 strains of P[23] (SCJY)
HLJ/15/1(KU886316) 中国/猪源China/pig 2015 92.1-96.4%