2017-2019年四川地区猪A群轮状病毒的分子流行病学调查
周群,陈小飞,阚蕊慈,李玉,曹慧,彭艳伶,张斌

Molecular Epidemiological Investigation of Porcine Group A Rotavirus in Sichuan from 2017 to 2019
Qun ZHOU,XiaoFei CHEN,RuiCi KAN,Yu LI,Hui CAO,YanLing PENG,Bin ZHANG
表2 RVA VP7 基因同源性分析
Table 2 RVA VP7 gene homology analysis
毒株
Strain
同源性最高的毒株
Strain with highest homology
国家及宿主
Country and host
年份
Year
同源性
Homology
SCMS-71 SCQL-5-2(MG066590) 中国/猪源China/pig 2018 99.9%
SCLS-18,SCLS-20 MOZ/21205(KP222851) 莫桑比克/人源Mozambique/human 2011 96.9%,97.4%
SCZY-165,SCZY-166 ZT-11D-T101(KM247280) 中国/人源China/human 2011 98.9%,98.3%
SCMS-69 GUB71(AB573647) 日本/猪源Japan/pig 2006 95.6%
SCGY-193,SCGY-198,SCGY-199,SCGY-201 R1954(KF726066) 中国/人源China/human 2013 95.1%
6株G5型(SCJY),SCGY-192
6 strains of G5 (SCJY)
HLJqqhe-1(JX498960) 中国/猪源China/pig 2011 97.6%-98.1%
SCYB-Y1,SCYB-Y2 LL3354(EF159575) 中国/人源China/human 2000 93.9%,94.2%
SCYB-C2,SCYB-C3 103-P-001-1-0126(MK227837) 中国/猪源China/pig 2014 93.7%
4株G9型(SCJY)
4 strains of G9 (SCJY)
LLP48(KJ126835) 中国/猪源China/pig 2008 97.4%-97.6%
SCRS-142,SCSN-96 HBHP(KX831114) 中国/猪源China/pig 2016 98.3%
SCDY-219 GXqz-2(JX498942) 中国/猪源China/pig 2011 97.5%
SCLZ-FB,SCYA-C7 ISO31(DQ117937) 印度/人源India/human 2008 96.2%,96.5%
SCMY-28,SCMS-153,SCDY-211,
SCDY-210,SCDY-209
CQ(KX831100) 中国/猪源China/pig 2016 95.9%-97.1%
SCSN-93,SCSN-94 07N1760(LC208008) 尼泊尔/猪源Nepal/pig 2007 96.1%
SCLJ-C18,SCLJ-C20 TA-1-2(KT820779) 中国/猪源China/pig 2014 85.1%