我国苹果斑点落叶病菌携带dsRNA分析及一种dsRNA病毒的鉴定
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曹钰晗,李紫腾,张静怡,张静娜,胡同乐,王树桐,王亚南,曹克强
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Analysis of dsRNA Carried by Alternaria alternata f. sp. mali in China and Identification of a dsRNA Virus
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CAO YuHan,LI ZiTeng,ZHANG JingYi,ZHANG JingNa,HU TongLe,WANG ShuTong,WANG YaNan,CAO KeQiang
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表3 高通量测序苹果斑点落叶病菌菌株QY-2携带病毒信息
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Table 3 Virus information in A. alternata f. sp. mali strain QY-2 by high-throughput sequencing
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基因ID Unigene ID | 基因长度 Unigene length (nt) | 蛋白描述 Protein description | 登录号 Accession number | E-value | Reads数量 Number of Reads | RPKM | Contig 10 | 3665 | RNA-dependent RNA polymerase [AaCV1] | BBC27878.1 | 0.00E+00 | 1451570 | 4820 | Contig 41 | 3054 | Putative coat protein [AaCV1] | BBC27881.1 | 3.5E-176 | 2331542 | 9292 | Contig 38 | 2824 | Hypothetical protein [AaCV1] | BBC27880.1 | 2.9E-108 | 1167609 | 5032 | Contig 24 | 2819 | Hypothetical protein [AaCV1] | BBC27879.1 | 2.3E-137 | 1268863 | 5478 |
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