甜瓜幼果果皮颜色基因GR的精细定位

许昕阳,沈佳,张跃建,李国景,牛晓伟,寿伟松

Fine Mapping of an Immature Rind Color Gene GR in Melon

XU XinYang,SHEN Jia,ZHANG YueJian,LI GuoJing,NIU XiaoWei,SHOU WeiSong

表3 定位区段内基因编码区变异

Table 3 Variations in the coding region of genes in the mapping interval

染色体 CHROM 位置 POS 参考碱基 REF 比对碱基 ALT 变异类型 Variant-classification 基因号 Gene_ID 参考氨基酸 REF (aa) 比对氨基酸 ALT (aa) chr04 612438 T G 错义突变 Missense_variant MELO.jh030628.1 K Q chr04 612476 T C 错义突变 Missense_variant MELO.jh030628.1 N S chr04 612484 G A 同义突变 Synonymous_variant MELO.jh030628.1 A A chr04 612488 G T 错义突变 Missense_variant MELO.jh030628.1 T K chr04 612491 C G 错义突变 Missense_variant MELO.jh030628.1 R P chr04 612501 C T 错义突变 Missense_variant MELO.jh030628.1 E Q chr04 612505 A G 同义突变 Synonymous_variant MELO.jh030628.1 Y S chr04 612519 A T 错义突变 Missense_variant MELO.jh030628.1 I I chr04 613526 A G 同义突变 Synonymous_variant MELO3C003375 E E chr04 613558 G C 错义突变 Missense_variant MELO3C003375 R P chr04 614480 A C 同义突变 Synonymous_variant MELO3C003375 L L chr04 614898 T C 同义突变 Synonymous_variant MELO3C003375 G G chr04 615687 G T 终止突变 Stop_gained MELO3C003375 E * chr04 617619 A G 错义突变 Missense_variant MELO3C003375 Q R chr04 620196 T G 错义突变 Missense_variant MELO3C003376 L R