苹果LRR-RLK基因家族鉴定和表达分析

黄金凤,吕天星,王寻,王颖达,王冬梅,闫忠业,刘志

Genome-Wide Identification and Expression Pattern Analysis of LRR-RLK Gene Family in Apple

HUANG JinFeng,LÜ TianXing,WANG Xu,WANG YingDa,WANG DongMei,YAN ZhongYe,LIU Zhi

表2 苹果LRR-RLK家族成员信息

Table 2 The information of LRR-RLK gene family in apple

亚家族 Subclade 基因数量 No.of genes 氨基酸数目 Number of amino acids 范围Range 等电点 Isoelectric point 分子量 Molecular weight (Kd) LRR数量 No. of LRRs I-1 10 697-1022 5.34-8.39 78.68-111.91 1-11 II 39 595-1054 5.16-8.49 66.69-116.19 1-6 III 50 400-1063 5.61-9.66 43.51-115.39 2-9 IV 5 681-683 6.16-7.76 73.96-74.16 3-5 V 12 551-801 5.57-9.39 60.88-86.53 2-6 VI-1 10 700-794 7.61-9.46 77.79-87.25 2-8 VI-2 5 655-716 5.50-5.92 71.84-78.63 1-3 VII-1 7 886-1010 5.28-6.26 96.77-110.12 5-12 VII-2 2 861-862 5.8-6.15 94.58-94.84 7 VII-3 3 1141-1146 5.61-7.56 106.07-123.50 11-16 VIII 9 794-964 5.84-7.24 87.52-105.10 3-7 IX 8 851-977 5.62-8.63 93.01-103.52 5-9 Xa 4 601-627 6.14-8.09 66.09-124.65 1-4 Xb-1 12 1021-1301 5.42-6.74 122.83-141.35 9-19 Xb-2 2 1071-1090 5.76-6.80 117.55-119.70 6 XI 74 614-1258 5.28-9.09 67.92-138.67 4-20 XII 111 318-1827 5.22-9.75 34.95-199.33 2-19 XIII-a 5 532-606 5.44-6.15 58.27-67.22 2-3 XIII-b 1 989 6.05 108.91 8 XIV 4 899-911 6.50-8.10 97.60-98.43 5-9 XV 5 441-1145 6.15-8.37 47.94-125.05 6-10