不同温度下TMV侵染枯斑三生烟的LncRNA差异表达
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贾海燕,宋丽云,徐翔,解屹,张超群,刘天波,赵存孝,申莉莉,王杰,李莹,王凤龙,杨金广
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Differential Expression of LncRNAs in Nicotiana tabacum var. Samsun NN Infected by TMV at Different Temperatures
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HaiYan JIA,LiYun SONG,Xiang XU,Yi XIE,ChaoQun ZHANG,TianBo LIU,CunXiao ZHAO,LiLi SHEN,Jie WANG,Ying LI,FengLong WANG,JinGuang YANG
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表3 测序数据概览
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Table 3 Overview of sequencing data
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样本名称
Sample name | 原始读段
Raw reads | 有效读段
Clean reads | 测序错误率
Error rate (%) | 可定位序列总数及占比
Total mapped | 多定位序列计数及占比
Multiple mapped | 单定位序列计数及占比
Uniquely mapped | | PBS_25_1 | 81285872 | 80011202 | 0.02 | 76771937 (95.95%) | 36818251 (46.02%) | 39953686 (49.94%) | | PBS_25_2 | 79744462 | 78438974 | 0.02 | 75316854 (96.02%) | 36751852 (46.85%) | 38565002 (49.17%) | | PBS_25_3 | 82086686 | 81323058 | 0.02 | 78074493 (96.01%) | 38211722 (46.99%) | 39862771 (49.02%) | | PBS_31_1 | 112775324 | 110071878 | 0.01 | 106555280 (96.81%) | 51925797 (47.17%) | 54629483 (49.63%) | | PBS_31_2 | 110922928 | 108381110 | 0.01 | 105100267 (96.97%) | 51096062 (47.14%) | 54004205 (49.83%) | | PBS_31_3 | 111456946 | 109144098 | 0.01 | 105971578 (97.09%) | 51922061 (47.57%) | 54049517 (49.52%) | | TMV_25_1 | 82779880 | 81084374 | 0.02 | 77865206 (96.03%) | 38330300 (47.27%) | 39534906 (48.76%) | | TMV_25_2 | 81397982 | 79800752 | 0.02 | 76525369 (95.90%) | 36994028 (46.36%) | 39531341 (49.54%) | | TMV_25_3 | 84779126 | 83206166 | 0.02 | 79834756 (95.95%) | 40768694 (49.00%) | 39066062 (46.95%) | | TMV_31_1 | 86454182 | 85145676 | 0.02 | 81734255 (95.99%) | 39993324 (46.97%) | 41740931 (49.02%) | | TMV_31_2 | 82671238 | 81754880 | 0.01 | 78713311 (96.28%) | 35893618 (43.90%) | 42819693 (52.38%) | | TMV_31_3 | 96258450 | 93993096 | 0.02 | 90712104 (96.51%) | 44629779 (47.48%) | 46082325 (49.03%) |
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