不同温度下TMV侵染枯斑三生烟的LncRNA差异表达

贾海燕,宋丽云,徐翔,解屹,张超群,刘天波,赵存孝,申莉莉,王杰,李莹,王凤龙,杨金广

Differential Expression of LncRNAs in Nicotiana tabacum var. Samsun NN Infected by TMV at Different Temperatures

HaiYan JIA,LiYun SONG,Xiang XU,Yi XIE,ChaoQun ZHANG,TianBo LIU,CunXiao ZHAO,LiLi SHEN,Jie WANG,Ying LI,FengLong WANG,JinGuang YANG

表2 31℃下差异表达lncRNA引物序列

Table 2 Primer sequences of differentially expressed lncRNAs at 31℃

转录本ID Transcript ID 基因ID Gene ID 正向引物序列 Forward primer sequence (5′ to 3′) 反向引物序列 Reverse primer sequence (5′ to 3′) LNC_008396 XLOC_031876 GCGATCTGCCGAAGCTGTGG TGCGTTACTCAAGCCGACATTCTC LNC_008562 XLOC_032544 TCCTGTTGCTTCATTGCTGCT ACAGATGAACACAGCGCAGG LNC_008815 XLOC_033553 GACTGTGAAACTGCGAATGGC GCATCCCTTCCAGAAGTCGG LNC_010207 XLOC_038635 AGACGAACAACTGCGAAAGCA CTGGTCGGCATCGTTTATGGT LNC_013541 XLOC_051547 AGCACCATCCTCACTTCCACCAG CGCAGGCTGCCTCACAACTTG LNC_016042 XLOC_060869 GATTAAGACAGCAGGACGGTGGTC GGCTAGTTGATTCGGCAGGTGAG LNC_018096 XLOC_068634 AGCCAAGCGTTCATAGCGAC AACCCAGCTCACGTTCCCTA LNC_024626 XLOC_093025 ACCACCTGTGGCTCCAGTTACC TAGGCGGACCTCGCAGAATCTTAG LNC_033085 XLOC_124537 AGCGAGCAGTCTGGACTCCTATG ACGAGTAACCAGCGCAATTGGAG LNC_033563 XLOC_126355 GTGGTGGTGCATGGCCGTTC TAGCAGGCTGAGGTCTCGTTCG LNC_036321 XLOC_136711 CTCTGTCATTCTTCGGTGCCGATG TGAGCTGCCATGCCATGATACAAG LNC_037998 XLOC_143050 GATTAAGACAGCAGGACGGTGGTC GGCTAGTTGATTCGGCAGGTGAG LNC_038712 XLOC_145744 CAACCGCTCAGCCATCTCTC GGGGTATCCACCCCTATGGC XR_001648128.1 107786374 GGAGGGAAGCTGGGTCGTAT GGCAATTCTCCATCGGCTCC XR_001655221.1 107817578 GAGAGTCGGGCTGCAACTTC GGGAAGCATGGCACCAACAA XR_001655293.1 107817783 GTCTGAGGTTGCGGTGAAGGC ATTGGCGGCAGAGAATTGACAGAG XR_001656793.1 107824145 TCTCATGTGGGATGGCACGA CATTCCACTGCGCACCTCTC XR_001657266.1 107826393 TTGAGGCCACTGTTCAAGACTTGG CGCGAGCAAGGTCATCAGAGC LNC_018541 XLOC_070302 ACTTCACAAGCAGCAGCTAGTTCC GTAATGCGCCAGGTGCCGTAG LNC_034892 XLOC_131403 GTGGGTTCCAGACCACAACC AGATGGAAGGGGCAGGTGTT XR_001644489.1 107769825 CCGTGGACGTGACAACATTGGAG CGGTGACTGTCGCTGAGATACTTG XR_001646112.1 107776988 TCGCTGCTGATTGTTGCTGTCTC GACTCGTCGGCAACCTCAACTG XR_001647877.1 107785495 ATCAATGTGGGAGCTTGCCT GCTTGTGCGTGTCTCGACTA XR_001647999.1 107785872 GCGGATGAGGTATGGTTCACAGC AGCTGCTTCCATAGTCTGTTGCTG XR_001648126.1 107786374 ATGAGAGTGGAGTGGGGCAG TGCGCCCAATAGGTTATGCG XR_001649356.1 107791865 ACGTTGCTTTACACTTTACCCTG TGGAGGAAGAAACCAAGCGT XR_001654070.1 107812109 TCCGTTCAAGTCCACCTGAAGTTC GCAGCTCACCGTGGAAGTCTC XR_001656841.1 107824342 CAAGCCATCATGCCTCACAGT CCGGAGTCTACCACCCATTCT XR_001656939.1 107824792 CTGCTGGTCCAGAAGCCGTTAAG AATGTCGTCACGAGTTCGGTCATG XR_001658441.1 107831745 CAGACGAGGGGTGGAGATGT GCAAATGCCAACAAACAGGGA