不同温度下TMV侵染枯斑三生烟的LncRNA差异表达

贾海燕,宋丽云,徐翔,解屹,张超群,刘天波,赵存孝,申莉莉,王杰,李莹,王凤龙,杨金广

Differential Expression of LncRNAs in Nicotiana tabacum var. Samsun NN Infected by TMV at Different Temperatures

HaiYan JIA,LiYun SONG,Xiang XU,Yi XIE,ChaoQun ZHANG,TianBo LIU,CunXiao ZHAO,LiLi SHEN,Jie WANG,Ying LI,FengLong WANG,JinGuang YANG

表1 25℃下差异表达lncRNA引物序列

Table 1 Primer sequences of differentially expressed lncRNAs at 25℃

转录本ID Transcript ID 基因ID Gene ID 正向引物序列 Forward primer sequence (5′ to 3′) 反向引物序列 Reverse primer sequence (5′ to 3′) LNC_000098 XLOC_000472 CCCTCCACGCAGTTCTTCTGA TGCCGGGAGTTTCGGGTTTA LNC_000799 XLOC_003050 GCCTTCTGCCGAATTGTTGG GCTCAAAGGAGGCCAAGTCC LNC_001093 XLOC_004138 ATGCGTCAGTTTGCATGGGA GAAATCTCAAGGGTAGCTGTACCA LNC_006130 XLOC_023441 GCCTTCGACTTGTCGTTTGCT ATCCGCAAATCAGCCCTTCC LNC_012986 XLOC_049416 CCTCTGCCTCAGGCTGTCTCG TTCTGCCGCTTCCGTTATTGCTG LNC_019285 XLOC_073034 GGATTGAATCTAAGATGAATGCTTGGT ACAGTCACAAGGGTCTAGAAGG LNC_028742 XLOC_108482 ACGCTGGCGAACGATAATAGAACC ACGGTCGAGATTCTCCTGGTCAG LNC_037710 XLOC_141968 TCTCTTTCTACCGGGAATTTAAAAAGT CCATTACGTATTGATTGGTGAGCT XR_001643474.1 107765638 CCACTTGCATGGGCAGTGAT GCCACCACACCAACTTCCTC XR_001643621.1 107766213 CGGAGAGGTGGAATGGCAAGTG TCCGAGATGTGCCTCCAAGACC XR_001644424.1 107769516 AACATTCACGGCCAGCAGAACC CTGAAGGCGCGACTGAGATTAGC XR_001645141.1 107772701 TCATTCTCAGGTCCTCCGTTGT TCTCTCTGTGCTTTCCGCCT XR_001650509.1 107796801 CGCCCATGTACCCGATTCTG CTTGTTCCAGATGCGCCAGT XR_001654053.1 107812073 CACTGCCTACACAACCTACACGTC AACAACATGCTGCGAAGAGACTCC XR_001657220.1 107826167 AATGGCTTTGTCTGCCTCGG AGGCGCGTTGATGAAAGAGG LNC_001159 XLOC_004417 GACACAGGTACTTGGTTCGCTC AAGAACCGGCACAATACGCC LNC_003116 XLOC_011996 GGTTTGCAGCGATAACTCGG TGGCTTCAACTATTCCCGCA LNC_004594 XLOC_017602 AGTGAATGTAACGGAGGCAGCAAC ACACAGAAGAGGATCGAGGTCGTC LNC_015076 XLOC_057288 CTCTTGCAGGAAGGTTGGCT CCTCATACGGCTCCTCCCTT LNC_015077 XLOC_057288 CTCTTGCAGGAAGGTTGGCT CCTCATACGGCTCCTCCCTT LNC_028743 XLOC_108482 ACGCTGGCGAACGATAATAGAACC ACGGTCGAGATTCTCCTGGTCAG LNC_030105 XLOC_113591 TCCCAACGTGTTACATAAGGCA GCACGGTGTTCTTCGACTCA LNC_036321 XLOC_136711 CTCTGTCATTCTTCGGTGCCGATG TGAGCTGCCATGCCATGATACAAG LNC_038081 XLOC_143307 GCTTAGTGTGTGACTCGTTGGT TGCGAAGTGATGGGTTGGTT XR_001643840.1 107767123 GTTAGTTCGAGGCTGCGGTCAAG CATCGGCGGCGGACAATTACC XR_001646643.1 107779549 GGTTGGATCAGCAGCAGCAGTAG AGCAGCAGTCTCATTAGCAGCAAC XR_001648910.1 107789767 ATCCGAACGACCACTCCCAG TTGCAAGTCATCACCGTCCG XR_001649452.1 107792124 TGTTGGAGAAGGCTGGGACT CGGCATCTGCTGCTTCTAGT XR_001651797.1 107802252 GGCATCAATCACACATGCCGT AGCAGCCACTGACTTGGAAAC XR_001654265.1 107813134 GCACTCGAACCAGAAGGCAA CAGCAGAAGCTCGACCACAA XR_001654587.1 107814577 GTTCATCGCCTTCTTCTGCCTCTC AAGCACCGAGAGCAACCAACATAG XR_001655076.1 107816953 AATGGCTTTGTCTGCCTCGG AGGCGCGTTGATGAAAGAGG XR_001657217.1 107826167 GTGGATGGCGAATGCGATCT CTGAGGTCCAGCTGCCAATG XR_001657841.1 107829108 GTGGTGGTGCATGGCCGTTC TAGCAGGCTGAGGTCTCGTTCG XR_001658459.1 107831913 GTGGTGGTGCATGGCCGTTC TAGCAGGCTGAGGTCTCGTTCG