水稻根系盐胁迫响应miRNA和tRF的鉴定
孟淑君,张雪海,王琪月,张稳,黄力,丁冬,汤继华

Identification of miRNAs and tRFs in Response to Salt Stress in Rice Roots
ShuJun MENG,XueHai ZHANG,QiYue WANG,Wen ZHANG,Li HUANG,Dong DING,JiHua TANG
表4 水稻盐胁迫差异表达tRF预测靶基因
Table 4 Predictive target genes for differential expression of tRFs in rice salt stress
来源tRNA基因编号
Gene ID of source tRNA
靶基因编号
Target gene ID
位置
Location
基因注释
Gene description
EPlORYSAT000373812 Os01g0810100 1:34412916..34416988 叶绿体核糖核酸酶III蛋白
Chloroplast ribonuclease III domain protein
Os10g0119300 10:1234067..1241670 FH2结构域结合肌动蛋白
Actin-binding FH2 domain containing protein
Os03g0301700 3:10621704..10625395 钙调蛋白结合蛋白磷酸酶
Calmodulin-binding protein phosphatase
Os03g0435200 3:18355628..18365524 五肽重复蛋白
Pentatricopeptide repeat domain containing protein
EPlORYSAT000373840 Os04g0531300 4:26565544..26571685 tRNA -二氢吡啶合酶蛋白
tRNA-dihydrouridine synthase domain containing protein
Os11g0593500 11:22604874..22606587 环状F-box蛋白
Cyclin-like F-box domain containing protein
Os06g0128200 6:1485977..1490634 LMBR1膜内在蛋白
LMBR1 integral membrane protein
Os03g0562200 3:20188178..20194997 环状F-box蛋白
Cyclin-like F-box domain containing protein
Os03g0860700 3:36320679..36333253 肌球蛋白Myosin
Os01g0850100 1:36540164..36545196 磷脂酸类磷脂
Phosphatidic acid phosphatase-like protein
ENSRNA049445145 Os08g0389300 8:18398361..18407618 UbiA-异戊二烯转移酶家族蛋白
UbiA prenyltransferase family domain containing protein
Os10g0464400 10:17133478..17137843 卤酸脱卤酶类水解酶蛋白
Haloacid dehalogenase-like hydrolase domain containing protein
ENSRNA049444418 Os08g0134900 8:1988346..1990818 保守假设蛋白Conserved hypothetical protein
Os01g0267800 1:9192164..9193439 丝氨酸/苏氨酸蛋白激酶蛋白
Serine/threonine protein kinase domain containing protein
Os03g0320100 3:11549564..11551862 α-N-阿拉伯呋喃糖苷酶 A
Alpha-N-arabinofuranosidase A
Os07g0484800 7:17787901..17801227 腺嘌呤磷酸核糖转移酶蛋白
Adenine phosphoribosyltransferase like protein
Os09g0333600 9:10071433..10085739 多效性耐药蛋白4 Pleiotropic drug resistance protein 4
Os09g0529700 9:20744838..20748509 液泡蛋白分选;内吞体分选转运复合体
Vacuolar protein sorting; endocyte sorting and transport complex
Os02g0250700 2:8518506..8535685 表达蛋白Expressed protein
Os12g0256600 12:8809699..8811919 保守假设蛋白Conserved hypothetical protein
Os08g0226100 8:7698342..7699299 保守假设蛋白Conserved hypothetical protein
Os05g0400200 5:19470226..19475222 逆转录转座子蛋白Ty1亚类
Retrotransposon protein Ty1-copia subclass
Os05g0126200 5:1497942..1499638 保守假设蛋白Conserved hypothetical protein
ENSRNA049446755 Os08g0387300 8:18299461..18299571 膜蛋白质Membrane protein
Os03g0320100 3:11549564..11551862 α-N-阿拉伯呋喃糖苷酶A
Alpha-N-arabinofuranosidase A
Os05g0400200 5:19470226..19475222 逆转录转座子蛋白Ty1亚类
Retrotransposon protein Ty1-copia subclass
EPlORYSAT000373840 Os03g0165300 3:3513371..3517214 保守假设蛋白Conserved hypothetical protein
Os12g0274450 12:10072058..10075165 保守假设蛋白Conserved hypothetical protein
Os04g0271700 4:11375483..11377317 玉米素葡萄糖基转移酶UDP-glycosyltransferase