可可毛色二孢全基因组分泌蛋白的预测及分析

邢启凯,李铃仙,曹阳,张玮,彭军波,燕继晔,李兴红

Prediction and Analysis of Candidate Secreted Proteins from the Genome of Lasiodiplodia theobromae

XING QiKai,LI LingXian,CAO Yang,ZHANG Wei,PENG JunBo,YAN JiYe,LI XingHong

表3 可可毛色二孢分泌蛋白信号肽切割位点的氨基酸组成分布

Table 3 The composition and distribution of amino acids at signal peptide cleavage site of secreted proteins in L. theobromae

氨基酸类型 Type of amino acids 信号肽切割位点-3到3位的氨基酸组成 Frequency of amino acids from -3 to +3 at signal peptide cleavage site of secreted proteins -3 -2 -1 1 2 3 数量 Amount 百分比 Percentage (%) 数量 Amount 百分比 Percentage (%) 数量 Amount 百分比 Percentage (%) 数量 Amount 百分比 Percentage (%) 数量 Amount 百分比 Percentage (%) 数量 Amount 百分比 Percentage (%) A 249 47.0 60 11.3 387 73.0 145 27.3 26 4.9 35 6.6 C 13 2.5 6 1.1 2 0.4 18 3.4 6 1.1 21 4.0 D 2 0.4 9 1.7 3 0.6 38 7.2 51 9.6 19 3.6 E 8 1.5 12 2.3 2 0.4 24 4.5 35 6.6 16 3.0 F 1 0.2 26 4.9 5 0.9 12 2.3 6 1.1 20 3.8 G 16 3.0 10 1.9 19 3.6 20 3.8 23 4.3 23 4.3 H 1 0.2 29 5.5 0 0 20 3.8 3 0.6 12 2.3 I 10 1.9 10 1.9 0 0 12 2.3 7 1.3 38 7.2 K 0 0 3 0.6 8 1.5 19 3.6 3 0.6 8 1.5 L 22 4.2 87 16.4 9 1.7 21 4.0 15 1.3 49 9.2 M 0 0 10 1.9 1 0.2 4 0.8 2 0.4 4 0.8 N 1 0.2 22 4.2 5 0.9 14 2.6 21 4.0 22 4.2 P 8 1.5 7 1.3 22 4.2 5 0.9 148 27.9 44 8.3 Q 5 0.9 48 9.1 6 1.1 68 12.8 24 4.5 25 4.7 R 9 1.7 27 5.1 3 0.6 10 1.9 6 1.1 14 2.6 S 56 10.6 68 12.8 36 6.8 30 5.7 44 8.3 40 7.5 T 40 7.5 44 8.3 9 1.7 26 4.9 61 11.5 74 14.0 V 89 16.8 35 6.6 9 1.7 31 5.8 33 6.2 41 7.7 W 0 0 1 0.2 1 0.2 4 0.8 6 1.1 5 0.9 Y 0 0 16 3.0 3 0.6 9 1.7 10 1.9 20 3.8