番茄褪绿病毒的进化动态与适应性进化特征

邹林峰,涂丽琴,沈建国,杜振国,蔡伟,季英华,高芳銮

The Evolutionary Dynamics and Adaptive Evolution of Tomato Chlorosis Virus

ZOU LinFeng,TU LiQin,SHEN JianGuo,DU ZhenGuo,CAI Wei,JI YingHua,GAO FangLuan

表2 分子钟模型和树先验不同组合的对数边际似然值

Table 2 Marginal likelihoods of different combinations of molecular clock model and tree prior

分子钟模型Molecular clock model 树先验模型Tree prior 对数边际似然值Log marginal likelihood 不相关对数正态分布的宽松分子钟 Uncorrelated lognormal relaxed clock 贝叶斯天际线 Bayesian skyline -3347.81/-3347.15 不相关对数正态分布的宽松分子钟 Uncorrelated lognormal relaxed clock 恒定大小 Constant size -3348.44/-3349.36 不相关对数正态分布的宽松分子钟 Uncorrelated lognormal relaxed clock 指数增长 Exponential growth -3353.59/-3355.58 严格分子钟 Strict clock 贝叶斯天际线Bayesian skyline -3369.38/-3366.75 严格分子钟 Strict clock 恒定大小Constant size -3368.88/-3365.99 严格分子钟 Strict clock 指数增长Exponential growth -3372.35/-3371.24