利用WGCNA鉴定谷子内源脱落酸响应禾生指梗霉胁迫的共表达基因
常国蓉(
),李任建,张琦,张育铭,韩渊怀,张宝俊()
),李任建,张琦,张育铭,韩渊怀,张宝俊()
Identification of Co-Expression Genes Related to Endogenous Abscisic Acid in Response to the Stress of Sclerospora graminicola by WGCNA in Foxtail Millet
CHANG GuoRong(),LI RenJian,ZHANG Qi,ZHANG YuMing,HAN YuanHuai,ZHANG BaoJun()
),LI RenJian,ZHANG Qi,ZHANG YuMing,HAN YuanHuai,ZHANG BaoJun()
图4. 软阈值确定和共表达网络构建
A：左图纵坐标表示网络模型指数,右图表示平均连通度;横坐标表示构建网络的软阈值,红色横线表示选取的最佳软阈值;B：不同的颜色表示构建的网络模块,系统进化树表示不同样本的层次聚类,每个样本对应模块的一种颜色
Fig. 4. Determination of soft threshold and construction of co-expression network
A：Different colors represent the built network modules, cluster dendrogram indicates hierarchical clustering of different samples, and each sample corresponds to a color of the module;B：The vertical coordinate on the left represents the index of the network model, the right represents the mean connectivity, and the horizontal coordinate represents the soft threshold of the network, the red line indicates the best soft threshold selected
