谷子萌发吸水期关键代谢途径的筛选与分析
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余爱丽,赵晋锋,成锴,王振华,张鹏,刘鑫,田岗,赵太存,王玉文
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Screening and Analysis of Key Metabolic Pathways in Foxtail Millet During Different Water Uptake Phases of Germination
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YU AiLi,ZHAO JinFeng,CHENG Kai,WANG ZhenHua,ZHANG Peng,LIU Xin,TIAN Gang,ZHAO TaiCun,WANG YuWen
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表2 测序结果及其与参考基因组比对分析
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Table 2 Summary of the sequencing and the reads mapping to the reference genome
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| 分类 Classification | 开始快速吸水期PhaseⅠ | 滞缓吸水期PhaseⅡ | 重新大量吸水期PhaseⅢ | | CK2 | CK2R | CK8 | CK8R | CK14 | CK14R | | 总reads Clean reads | 38845760 | 39679812 | 56164700 | 43525742 | 46838670 | 49151796 | | 总核苷酸 Clean bases | 4894565760 | 4986871932 | 7076752200 | 5472201146 | 5901672420 | 6178141042 | | GC含量 GC content (%) | 58.72 | 57.83 | 57.53 | 56.81 | 57.21 | 56.36 | | 碱基质量值 Q30 (%) | 89.74 | 85.29 | 90.33 | 85.17 | 91.62 | 85.13 | | 匹配的reads Mapped reads | 31007621 (79.82%) | 31533133 (79.47%) | 45812237 (81.57%) | 35213766 (80.90%) | 38024006 (81.18%) | 39595878 (80.56%) | | 唯一位点匹配reads Unique mapped reads | 26519605 (68.27%) | 27126368 (68.36%) | 42124995 (75.00%) | 31824703 (73.12%) | 35017461 (74.76%) | 35922812 (73.09%) | | 多位点匹配reads Multiple mapped reads | 4488016 (11.55%) | 4406765 (11.11%) | 3687242
(6.57%) | 3389063
(7.79%) | 3006545
(6.42%) | 3673066
(7.47%) |
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