黄瓜单性结实性状遗传与QTL定位

牛志红,宋晓飞,李晓丽,郭晓雨,何书强,贺栾劲芝,冯志红,孙成振,闫立英

Inheritance and QTL Mapping for Parthenocarpy in Cucumber

ZhiHong NIU,XiaoFei SONG,XiaoLi LI,XiaoYu GUO,ShuQiang HE,LuanJingZhi HE,ZhiHong FENG,ChengZhen SUN,LiYing YAN

表3 黄瓜单性结实性状相关候选基因和功能预测

Table 3 Candidate genes prediction and function annotations for parthenocarpy in cucumber

基因号 Gene ID 变异类型 Variant 位置 Position 参考基因组基因型/该位点其他基因型Ref/Alt 拟南芥库里功能注释 Functional annotation of Arabidopsis Csa1G042220 Nonsynonymous 4159708 T/C 编码ASPG1,与抗旱相关Encodes ASPG1 (ASPARTIC PROTEASE IN GUARD CELL 1). Functions in drought avoidance through abscisic acid (ABA) signalling in guard cells Csa1G049980 Nonsynonymous 5680530 A/G 肽酶C78,泛素折叠修饰特异性肽酶1/2 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/2 Csa6G367130 Nonsynonymous 16841983 C/G 靶圈套卷曲螺旋结构域蛋白 Target SNARE coiled-coil domain protein Csa1G042830 Upstream 4532431 A/G 钙依赖性脂质结合（CALB结构域）家族蛋白 Calcium-dependent lipid-binding (CaLB domain) family protein Csa1G045620 Upstream 5048161 T/C 编码钙依赖性蛋白激酶 Target SNARE coiled-coil domain protein Csa1G045620 Upstream 5048182 T/C 编码钙依赖性蛋白激酶 Target SNARE coiled-coil domain protein Csa1G045620 Upstream 5048193 G/A 编码钙依赖性蛋白激酶 Target SNARE coiled-coil domain protein Csa1G045620 Upstream 5048246 G/A 编码钙依赖性蛋白激酶 Target SNARE coiled-coil domain protein Csa3G002320 Upstream 239366 G/C RB1诱导的卷曲螺旋蛋白 RB1-inducible coiled-coil protein Csa3G036410 Upstream 2537701 C/T 富含亮氨酸的重复蛋白激酶家族蛋白 Leucine-rich repeat protein kinase family protein Csa3G043910 Upstream 3022472 A/G GRAS家族转录因子 GRAS family transcription factor Csa3G043910 Upstream 3022485 T/A GRAS家族转录因子 GRAS family transcription factor Csa3G045170 Upstream 3188752 T/C 跨膜蛋白 Transmembrane protein Csa3G047740 Upstream 3294577 C/T 咖啡酸/5-羟阿魏酸O-甲基转移酶 A caffeic acid/5-hydroxyferulic acid O-methyltransferase Csa3G047740 Upstream 3294578 G/A 咖啡酸/5-羟阿魏酸O-甲基转移酶 A caffeic acid/5-hydroxyferulic acid O-methyltransferase Csa3G073810 Upstream 3855792 G/A 编码参与介导植物对发病机制的反应的蛋白质 Encodes a protein involved in mediating plant responses to pathogenesis Csa3G144130 Upstream 9538626 G/A 编码与CBL相互作用蛋白激酶SNF1和SOS2具有相似性的丝氨酸/苏氨酸蛋白激酶 Encodes a serine/threonine protein kinase with similarities to CBL-interacting protein kinases, SNF1 and SOS2 Csa3G144130 Upstream 9538714 G/A 编码与CBL相互作用蛋白激酶SNF1和SOS2具有相似性的丝氨酸/苏氨酸蛋白激酶 Encodes a serine/threonine protein kinase with similarities to CBL-interacting protein kinases, SNF1 and SOS2 Csa6G324800,Csa6G324810 Upstream 15102611 C/G 编码与NAD相关的苹果酸脱氢酶活性的蛋白 Encodes a protein with NAD-dependent malate dehydrogenase activity, located in chloroplasts Csa6G344310 Upstream 15681038 A/G 腺苷酸核苷酸水解酶类似结构域蛋白的激酶 Kinase with adenine nucleotide alpha hydrolases-like domain-containing protein Csa6G344310 Upstream 15681043 T/C 腺苷酸核苷酸水解酶类似结构域蛋白的激酶 Kinase with adenine nucleotide alpha hydrolases-like domain-containing protein Csa6G362930 Upstream 16350065 A/C 亚精胺合成酶 Encodes a spermine synthase Csa6G375720 Upstream 16932936 T/C 抗病蛋白（CC-NBS-LRR类）家族 Disease resistance protein (CC-NBS-LRR class) family Csa6G375720 Upstream 16932970 A/G 抗病蛋白（CC-NBS-LRR类）家族 Disease resistance protein (CC-NBS-LRR class) family Csa6G396650 Upstream 17566966 C/T 编码一种调节细菌肽聚糖传感和对细菌感染免疫的赖氨酸基序蛋白 Encodes a lysin-motif protein mediating bacterial peptidoglycan sensing and immunity to bacterial infection Csa6G513690 Upstream 26648579 A/C 编码参与苯丙氨酸生物合成的质体局部芳香族脱水酶 Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis