利用RNA-Seq发掘玉米叶片形态建成相关的调控基因

郭书磊,鲁晓民,齐建双,魏良明,张新,韩小花,岳润清,王振华,铁双贵,陈彦惠

Explore Regulatory Genes Related to Maize Leaf Morphogenesis Using RNA-Seq

ShuLei GUO,XiaoMin LU,JianShuang QI,LiangMing WEI,Xin ZHANG,XiaoHua HAN,RunQing YUE,ZhenHua WANG,ShuangGui TIE,YanHui CHEN

表4 鞘脂类代谢路径及其相关基因

Table 4 Sphingolipid metabolism pathway and related genes

路径 pathway 基因编号 Gene ID 差异倍数 FC 基因描述/注释 Gene description/annotation 鞘脂类代谢 Sphingolipid metabolism GRMZM2G165613 0.00 下调Down 丝氨酸软脂酰转移酶,长链碱基生物合成蛋白1b Serine palmitoyltransferase, Long chain base biosynthesis protein 1b GRMZM2G444378 0.00 下调Down 丝氨酸软脂酰转移酶,PKC激活蛋白磷酸酶1型抑制剂 Serine palmitoyltransferase, PKC-activated protein phosphatase-1 inhibitor GRMZM2G449763 0.00 下调Down 丝氨酸软脂酰转移酶,胺核黄素氧化还原酶 Serine palmitoyltransferase, Flavin containing amine oxidoreductase GRMZM2G076398 0.00 下调Down 丝氨酸软脂酰转移酶,长链碱基生物合成蛋白1b Serine palmitoyltransferase, Long chain base biosynthesis protein 1b GRMZM2G134248 0.24 下调Down 丝氨酸软脂酰转移酶,长链碱基生物合成蛋白1b Serine palmitoyltransferase, Long chain base biosynthesis protein 1b GRMZM2G144985 0.33 下调Down 丝氨酸软脂酰转移酶,长链碱基生物合成蛋白1b Serine palmitoyltransferase, Long chain base biosynthesis protein 1b GRMZM2G152888 0.30 下调Down 丝氨酸软脂酰转移酶,长链碱基生物合成蛋白2a Serine palmitoyltransferase, Long chain base biosynthesis protein 2a GRMZM2G357734 0.02 下调Down 丝氨酸软脂酰转移酶,胺核黄素氧化还原酶 Serine palmitoyltransferase, Flavin containing amine oxidoreductase GRMZM2G402368 0.01 下调Down SUR2,鞘氨醇C4型单加氧酶2 SUR2, sphinganine C4-monooxygenase 2 GRMZM2G030118 0.11 下调Down SUR2,鞘氨醇C4型单加氧酶2 SUR2, sphinganine C4-monooxygenase 2 GRMZM2G346455 0.46 下调Down α-半乳糖苷酶,参与植物细胞壁 Alpha-galactosidase 1, involved in plant-type cell wall GRMZM2G095126 2.66 上调Up α-半乳糖苷酶,参与植物细胞壁 Alpha-galactosidase 1, involved in plant-type cell wall GRMZM2G105922 2.27 上调Up GBA2,非溶酶体葡糖神经酰胺酶 GBA2, non-lysosomal glucosylceramidase MAP激酶 MAP kinase GRMZM2G135904 13.57 上调Up MAPK12,丝裂原激活蛋白激酶家族蛋白 MAPK12, MAP kinase family protein GRMZM2G459824 8.117 上调Up MAPKKK2,丝裂原激活蛋白激酶激酶激酶ANP1 MAPKKK2, MAP kinase kinase kinase ANP1-like GRMZM5G878379 3.00 上调Up MAPKK4,丝裂原激活蛋白激酶家族蛋白 MAPKK4, MAP kinase family protein GRMZM2G064601 2.49 上调Up MAPKKK,丝裂原激活蛋白激酶激酶激酶YODA MAPKKK, MAP kinase kinase kinase YODA GRMZM2G062761 2.04 上调Up MAPK17,丝裂原激活蛋白激酶家族蛋白 MAPK17, MAP kinase family protein AP1类 AP1-like GRMZM2G055782 17.58 上调Up MADS-box型转录因子27 MADS-box transcription factor 27-like GRMZM2G147716 3.78 上调Up AGL8/AP1,K-box和MADS-box型转录因子家族 AGL8/AP1, K-box region and MADS-box transcription factor family GRMZM2G070034 2.88 上调Up MADS-box型转录因子56 MADS-box transcription factor 56-like LFY 类LFY-like GRMZM2G162814 0.25 下调Down 多叶,花分生组织蛋白,影响花和叶片的发育 Leafy, floral meristem identity protein, affect flower and leaf development