水稻耐淹成苗率相关性状全基因组的关联分析

孙凯,李冬秀,杨靖,董骥驰,严贤诚,罗立新,刘永柱,肖武名,王慧,陈志强,郭涛

Genome-Wide Association Analysis for Rice Submergence Seedling Rate

SUN Kai,LI DongXiu,YANG Jing,DONG JiChi,YAN XianCheng,LUO LiXin,LIU YongZhu,XIAO WuMing,WANG Hui,CHEN ZhiQiang,GUO Tao

表5 胚芽鞘长关联位点

Table 5 Associate loci of coleoptile length

染色体 Chr. SNP位置 Position (bp) 等位基因 Allele 峰值 Peak value 已报道的位点 Known loci 3 22007803 C/T 5.023909483 4 6615471 A/G 4.342639196 4 23562335 T/C 4.028691488 5 15450007 G/A 4.777759954 [24] 6 757734 A/G 4.284055624 6 9693092 A/G 4.340712509 6 21932341 T/C 4.165186256 [25-26] 6 29822164 T/A 4.48136579 [27-28] 8 5689664 C/T 4.675971197 [29] 8 18019426 T/C 4.364278864 10 3160014 G/A 4.652868342 10 7504391 T/C 4.286580613 10 17384859 G/C 4.84143398 11 10896433 T/C 4.076205999 11 18620615 C/A 4.169961251