桃GRAS家族全基因组鉴定与响应UV-B的表达模式分析
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李晨,赵雪惠,王庆杰,王旭旭,肖伟,陈修德,付喜玲,李玲,李冬梅
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Genome Identification of PpGRAS Family and Expression Pattern Analysis of Responding to UV-B in Peach
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Chen LI,XueHui ZHAO,QingJie WANG,XuXu WANG,Wei XIAO,XiuDe CHEN,XiLing Fu,Ling LI,DongMei LI
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表2 桃GRAS及其相关信息
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Table 2 List of PpGRAS genes and their related information
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基因编号
Gene name | 基因登录号
Locus name | 染色体
Chromosome | 类别
Group | 定位
Locus | 开放阅读
框长度
ORF length (bp) | 蛋白长度
Protein length (aa) | 分子量
Molecular
weight (Da) | 等电点
Isoelectric
point | | PpGRAS1 | Prupe.1G119100 | 1 | Ⅵ | 9323354 9325141 | 1788 | 596 | 66738.9 | 4.93 | | PpGRAS2 | Prupe.1G119200 | 1 | Ⅴ | 9326642 9327967 | 1326 | 442 | 49126.9 | 6.94 | | PpGRAS3 | Prupe.1G199300 | 1 | Ⅲ | 19270496 19271845 | 1350 | 450 | 50539.2 | 5.08 | | PpGRAS4 | Prupe.1G237500 | 1 | Ⅴ | 25203094 25204641 | 1548 | 516 | 57213.2 | 6.51 | | PpGRAS5 | Prupe.1G329600 | 1 | Ⅳ | 31282447 31283783 | 1311 | 437 | 48095.8 | 6.83 | | PpGRAS6 | Prupe.1G501500 | 1 | Ⅶ | 41498576 41500096 | 1521 | 507 | 55337.3 | 5.20 | | PpGRAS7 | Prupe.2G028700 | 2 | Ⅴ | 2987997 2990761 | 1386 | 462 | 52324.3 | 6.28 | | PpGRAS8 | Prupe.2G138400 | 2 | Ⅷ | 19548826 19551964 | 2145 | 715 | 78010.1 | 5.40 | | PpGRAS9 | Prupe.2G237300 | 2 | Ⅱ | 25838372 25841556 | 2007 | 669 | 75561.2 | 5.62 | | PpGRAS10 | Prupe.2G299400 | 2 | Ⅰ | 28850212 28852416 | 1938 | 646 | 70121.6 | 7.19 | | PpGRAS11 | Prupe.3G040400 | 3 | Ⅲ | 2895471 2897333 | 1647 | 549 | 61096.3 | 6.41 | | PpGRAS12 | Prupe.3G162500 | 3 | Ⅳ | 18144529 18147307 | 1782 | 594 | 64551.4 | 4.91 | | PpGRAS13 | Prupe.3G187000 | 3 | Ⅴ | 20103771 20105111 | 1341 | 447 | 48568 | 5.80 | | PpGRAS14 | Prupe.3G201900 | 3 | Ⅰ | 21021917 21025350 | 1668 | 556 | 62383.7 | 6.96 | | PpGRAS15 | Prupe.3G222800 | 3 | Ⅲ | 22307572 22309814 | 1590 | 530 | 58784.2 | 6.51 | | PpGRAS16 | Prupe.3G249700 | 3 | Ⅵ | 23979126 23980343 | 1218 | 406 | 45828.1 | 7.56 | | PpGRAS17 | Prupe.3G309800 | 3 | Ⅶ | 26939961 26942210 | 2127 | 709 | 78477.6 | 6.15 | | PpGRAS18 | Prupe.4G007500 | 4 | Ⅰ | 396663 398565 | 1623 | 541 | 60455.4 | 6.24 | | PpGRAS19 | Prupe.4G132100 | 4 | Ⅵ | 7314327 7315982 | 1599 | 533 | 59633.6 | 4.61 | | PpGRAS20 | Prupe.4G200200 | 4 | Ⅰ | 12432037 12435877 | 1758 | 586 | 65220.3 | 5.84 | | PpGRAS21 | Prupe.4G233000 | 4 | Ⅰ | 14976407 14979370 | 1713 | 571 | 63145.4 | 5.17 | | PpGRAS22 | Prupe.4G258200 | 4 | Ⅵ | 18325403 18326818 | 1416 | 472 | 52583.6 | 6.00 | | PpGRAS23 | Prupe.5G072300 | 5 | Ⅷ | 8700201 8703734 | 2268 | 756 | 82196.4 | 6.55 | | PpGRAS24 | Prupe.5G091700 | 5 | Ⅴ | 10228192 10230468 | 2094 | 698 | 76771.2 | 5.37 | | PpGRAS25 | Prupe.5G156100 | 5 | Ⅵ | 13931708 13933297 | 1590 | 530 | 58679 | 6.31 | | PpGRAS26 | Prupe.6G037000 | 6 | Ⅰ | 2793373 2794605 | 1233 | 411 | 46253.6 | 6.94 | | PpGRAS27 | Prupe.6G073300 | 6 | Ⅱ | 4999593 5001653 | 2061 | 687 | 77912 | 4.95 | | PpGRAS28 | Prupe.6G073400 | 6 | Ⅱ | 5005442 5008392 | 2154 | 718 | 81656.6 | 6.58 | | PpGRAS29 | Prupe.6G073500 | 6 | Ⅱ | 5010337 5012421 | 2085 | 695 | 78198.1 | 6.34 | | PpGRAS30 | Prupe.6G073600 | 6 | Ⅱ | 5020790 5022844 | 2055 | 685 | 77016.8 | 6.09 | | PpGRAS31 | Prupe.6G073700 | 6 | Ⅱ | 5025889 5029019 | 2076 | 692 | 78813.9 | 6.22 | | PpGRAS32 | Prupe.6G073800 | 6 | Ⅱ | 5037609 5040687 | 2121 | 707 | 79850.6 | 5.92 | | PpGRAS33 | Prupe.6G073900 | 6 | Ⅱ | 5044672 5047324 | 2355 | 785 | 88209.9 | 5.58 | | PpGRAS34 | Prupe.6G074000 | 6 | Ⅱ | 5052682 5054723 | 1998 | 666 | 74774.8 | 6.41 | | PpGRAS35 | Prupe.6G220800 | 6 | Ⅲ | 22642849 22644378 | 1530 | 510 | 57075.9 | 5.46 | | PpGRAS36 | Prupe.6G223200 | 6 | Ⅰ | 22836944 22839388 | 1437 | 479 | 53107.6 | 5.58 | | PpGRAS37 | Prupe.6G257000 | 6 | Ⅱ | 24964599 24968826 | 2253 | 751 | 84278.9 | 6.66 | | PpGRAS38 | Prupe.6G282800 | 6 | Ⅲ | 26358992 26360827 | 1611 | 537 | 60502 | 4.36 | | PpGRAS39 | Prupe.6G300900 | 6 | Ⅴ | 27305816 27309379 | 2550 | 850 | 91964.8 | 6.81 | | PpGRAS40 | Prupe.7G150900 | 7 | Ⅷ | 16214663 16216336 | 1674 | 558 | 62194.2 | 6.20 | | PpGRAS41 | Prupe.7G153700 | 7 | Ⅵ | 16381917 16385916 | 1806 | 602 | 65807.8 | 5.08 | | PpGRAS42 | Prupe.7G236100 | 7 | Ⅳ | 20509687 20511389 | 1614 | 538 | 59160.2 | 5.81 | | PpGRAS43 | Prupe.8G016200 | 8 | Ⅰ | 1519578 1522426 | 1641 | 547 | 60817.4 | 4.83 | | PpGRAS44 | Prupe.8G054000 | 8 | Ⅳ | 6129612 6131018 | 1407 | 469 | 53325 | 7.17 | | PpGRAS45 | Prupe.8G220900 | 8 | Ⅵ | 20048389 20050058 | 1539 | 513 | 57646.5 | 6.55 | | PpGRAS46 | Prupe.8G266100 | 8 | Ⅶ | 22267137 22269341 | 1923 | 641 | 72100.3 | 5.58 | | PpGRAS47 | Prupe.I004400 | U | Ⅱ | 740 3677 | 2121 | 707 | 79888.5 | 5.82 | | PpGRAS48 | Prupe.I004500 | U | Ⅱ | 13496 16456 | 2037 | 679 | 76744.6 | 6.60 |
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