柱状苹果Co基因的筛选与候选基因分析
白团辉,李莉,郑先波,王苗苗,宋尚伟,焦健,宋春晖

Screening and Expression Analysis of Co Candidate Genes in Columnar Apple
TuanHui BAI,Li LI,XianBo ZHENG,MiaoMiao WANG,ShangWei SONG,Jian JIAO,ChunHui SONG
表2 苹果Co定位区间的基因初步筛选
Table 2 Preliminary screening of genes in apple Co region
基因编号
Gene ID
预测功能
Putative function
基因表达量Gene expression
普通型Normal 柱状Columnar
MD10G1183600 肽酶S24/S26A/S26B/S26C家族蛋白 Peptidase family protein 1040.4 1080.7
MD10G1183700 染色体(SMC)家族蛋白的结构维持 (SMC) family protein 777.0 1174.6
MD10G1183800 非编码RNA ncRNA - -
MD10G1183900 非编码RNA ncRNA - -
MD10G1184000 前mRNA剪接Prp 18-相互作用因子 Pre-mRNA splicing Prp18-interacting factor 949.5 1446.9
MD10G1184100 MYB结构域蛋白15 MYB domain protein 15 11.4 230.1
MD10G1184200 非编码RNA ncRNA - -
MD10G1184300 未知功能蛋白 Protein of unknown function 331.7 335.6
MD10G1184400 未知功能蛋白 Protein of unknown function 270.1 240.6
MD10G1184500 肌动蛋白解聚因子6 Actin depolymerizing factor 6 1209.1 1275.9
MD10G1184600 磷酸盐转运蛋白1 Phosphate transporter 1 - -
MD10G1184700 磷酸盐转运蛋白1 Phosphate transporter 1 472.8 519.2
MD10G1184800 乙烯响应因子1 Ethylene response factor 1 2.8 0.0
MD10G1184900 非编码RNA ncRNA - -
MD10G1185000 整合酶型DNA结合超家族蛋白 Integrase-type DNA-binding superfamily protein 2.8 0.0
MD10G1185100 整合酶型DNA结合超家族蛋白 Integrase-type DNA-binding superfamily protein - -
MD10G1185200 未知功能蛋白 Protein of unknown function 518.3 640.6
MD10G1185300 环/U盒超家族蛋白 RING/U-box superfamily protein - -
MD10G1185400 2-氧戊二酸(2OG)和铁(II)依赖性加氧酶超家族蛋白
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
0.0 26.4
MD10G1185500 2-氧戊二酸(2OG)和铁(II)依赖性加氧酶超家族蛋白
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
- -
MD10G1185600 环/U盒超家族蛋白RING/U-box superfamily protein 0.9 3.2
MD10G1185700 四三肽重复序列(TPR)样超家族蛋白
Tetratricopeptide repeat (TPR)-like superfamily protein
- -
MD10G1185800 四三肽重复序列(TPR)样超家族蛋白
Tetratricopeptide repeat (TPR)-like superfamily protein
- -
MD10G1185900 自噬9 Autophagy 9 (APG9) 420.7 515.0
MD10G1186000 结节蛋白MTN21/EAMA样转运蛋白家族
Nodulin MTN21/EAMA-like transporter family protein
84.3 108.7
MD10G1186100 无顶端分生组织结构域转录调节超家族蛋白
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
- -
MD10G1186200 非编码RNA ncRNA - -
MD10G1186300 开放阅读框7上游保守肽 Conserved peptide upstream open reading frame 7 966.5 1175.6
MD10G1186400 2-氧戊二酸(2OG)和铁(II)依赖性加氧酶超家族蛋白
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
41.7 11.6
MD10G1186500 糖基水解酶9B6 Glycosyl hydrolase 9B6 - -
MD10G1186600 糖基水解酶9B1 Glycosyl hydrolase 9B1 - -
MD10G1186700 2-氧戊二酸(2OG)和铁(II)依赖性加氧酶超家族蛋白
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
- -
MD10G1186800 碱性螺旋-环-螺旋(bHLH)DNA结合超家族蛋白
Basic helix-loop-helix (bHLH) DNA-binding superfamily protein
- -
MD10G1186900 碱性螺旋-环-螺旋(bHLH)DNA结合超家族蛋白
Basic helix-loop-helix (bHLH) DNA-binding superfamily protein
- -
MD10G1187000 2-氧戊二酸(2OG)和铁(II)依赖性加氧酶超家族蛋白
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
0.9 11.6
MD10G1187100 非编码RNA ncRNA - -
MD10G1187200 α/β水解酶超家族蛋白Alpha/beta-Hydrolases superfamily protein 2.8 0.0
MD10G1187300 侧生器官边界结构域29 Lateral organ boundaries-domain 29 - -
MD10G1187400 锌指Zinc finger - -
MD10G1187500 光系统I亚单位H2 Photosystem I subunit H2 - -
MD10G1187600 侧生器官边界结构域29 Lateral organ boundaries-domain 29 - -
MD10G1187700 侧生器官边界结构域16 Lateral organ boundaries-domain 16 1.9 0.0
MD10G1187800 多聚ADP核糖聚合酶2 Poly(ADP-ribose) polymerase 2 869.9 577.3
MD10G1187900 ARM重复超家族蛋白 ARM repeat superfamily protein 560.0 506.6
MD10G1188000 BET1P/SFT1P样蛋白14A BET1P/SFT1P-like protein 14A 915.4 391.5
MD10G1188100 C2H2和C2HC锌指超家族蛋白C2H2 and C2HC zinc fingers superfamily protein 5.7 12.7
MD10G1188200 C2H2和C2HC锌指超家族蛋白C2H2 and C2HC zinc fingers superfamily protein - -
MD10G1188300 核糖体S17家族蛋白 Ribosomal S17 family protein 0.0 2.1
MD10G1188400 具有Dil结构域的肌球蛋白家族蛋白 Myosin family protein with Dil domain 110.9 186.8
MD10G1188500 半乳糖氧化酶/kelch重复超家族蛋白
Galactose oxidase/kelch repeat superfamily protein
- -
MD10G1188600 未知Unknown - -
MD10G1188700 2-氧戊二酸(2OG)和铁(II)依赖性加氧酶超家族蛋白
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
- -
MD10G1188800 2-氧戊二酸(2OG)和铁(II)依赖性加氧酶超家族蛋白
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
- -
MD10G1188900 未知Unknown 34.1 51.7
MD10G1189000 未知Unknown 292.8 93.9
MD10G1189100 未知Unknown 154.5 228.0
MD10G1189200 光合电子转移C Photosynthetic electron transfer C - -
MD10G1189300 未知Unknown 145.0 162.5
MD10G1189400 2-氧戊二酸(2OG)和铁(II)依赖性加氧酶超家族蛋白
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
- -
MD10G1189500 未知Unknown 37.9 19.0
MD10G1189600 2-氧戊二酸(2OG)和铁(II)依赖性加氧酶超家族蛋白
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
- -
MD10G1189700 半乳糖氧化酶/kelch重复超家族蛋白
Galactose oxidase/kelch repeat superfamily protein
- -
MD10G1189800 未知Unknown - -
MD10G1189900 2-氧戊二酸(2OG)和铁(II)依赖性加氧酶超家族蛋白
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
- -
MD10G1190000 碱性螺旋-环-螺旋(bHLH)DNA结合超家族蛋白
Basic helix-loop-helix (bHLH) DNA-binding superfamily protein
668.0 853.8
MD10G1190100 未知Unknown 245.4 51.7
MD10G1190200 细胞色素P450 Cytochrome P450 531.6 331.4
MD10G1190300 未知Unknown - -
MD10G1190400 细胞色素P450 Cytochrome P450 661.4 798.9
MD10G1190500 未知功能蛋白 Protein of unknown function 69.2 180.5
MD10G1190600 非编码RNA ncRNA 6.6 5.3
MD10G1190700 IND1(NADH脱氢酶所需的铁硫蛋白)-类
IND1(iron-sulfur protein required for NADH dehydrogenase)-like
225.5 520.3
MD10G1190800 类pfkb碳水化合物激酶家族蛋白 Pfkb-like carbohydrate kinase family protein 193.3 224.8
MD10G1190900 Mudr家族转座酶 Mudr family transposase 389.5 707.1
MD10G1191000 非编码RNA ncRNA 1.9 3.2
MD10G1191100 含核苷三磷酸水解酶超家族蛋白的P环
P-loop containing nucleoside triphosphate hydrolases superfamily protein
2.8 9.5
MD10G1191200 翼螺旋DNA结合转录因子家族蛋白
Winged-helix DNA-binding transcription factor family protein
10231.9 5165.8
MD10G1191300 乙烯响应元件结合因子3 Ethylene responsive element binding factor 3 1089.7 547.7
MD10G1191400 WRKY DNA结合蛋白21 WRKY DNA-binding protein 21 839.5 546.7
MD10G1191500 信号识别粒子 Signal recognition particle 508.8 376.8
MD10G1191600 跨膜氨基酸转运体家族蛋白 Transmembrane amino acid transporter family protein
MD10G1191700 PRA1家族蛋白 PRA1 (Prenylated rab acceptor) family protein 321.2 246.9
MD10G1191800 DREB2A相互作用蛋白2 DREB2A-interacting protein 2 338.3 338.8
MD10G1191900 镁转运蛋白9 Magnesium transporter 9 364.8 421.1
MD10G1192000 半乳糖醛糖基转移酶6 Galacturonosyltransferase 6 188.6 193.1
MD10G1192100 光系统II反应中心W Photosystem II reaction center W 6877.5 1885.9
MD10G1192200 非编RNA ncRNA 7.6 2.1
MD10G1192300 谷胱甘肽还原酶 Glutathione reductase 665.2 1506.0
MD10G1192400 Transferin/WD 40重复超家族蛋白 Transducin/WD40 repeat-like superfamily protein 11.4 58.0
MD10G1192500 α/β水解酶超家族蛋白 Alpha/beta-Hydrolases superfamily protein 303.2 237.4
MD10G1192600 非编码RNA ncRNA
MD10G1192700 非编码RNA ncRNA - -
MD10G1192800 类RNI超家族蛋白 RNI-like superfamily protein 1226.2 1437.4
MD10G1192900 吲哚-3-乙酸7 Indole-3-acetic acid 7 3281.4 8731.8
MD10G1193000 AUX/IAA转录调节家族蛋白 AUX/IAA transcriptional regulator family protein - -
MD10G1193100 原体prib/单链DNA结合 Primosome prib/single-strand DNA-binding 302.3 378.9
MD10G1193200 碱性螺旋-环-螺旋(bHLH)DNA结合超家族蛋白 Basic helix-loop-helix (bHLH) DNA-binding superfamily protein 525.0 624.8
MD10G1193300 色氨酸合酶α链 Tryptophan synthase alpha chain 329.8 215.3
MD10G1193400 碱性亮氨酸拉链25 Basic leucine zipper 25 145.9 575.2
MD10G1193500 GNAT家族1组蛋白乙酰转移酶 Histone acetyltransferase of the GNAT family 1 547.7 491.8
MD10G1193600 非编码RNA ncRNA - -
MD10G1193700 泛素结合酶11 Ubiquitin-conjugating enzyme 11 - -
MD10G1193800 SOUL血红素结合家族蛋白 SOUL heme-binding family protein 1072.7 1758.2
MD10G1193900 泛素特异性蛋白酶15 Ubiquitin-specific protease 15 810.2 1333.9
MD10G1194000 阳离子氨基酸转运蛋白8 Cationic amino acid transporter 8 532.5 255.4
MD10G1194100 拟南芥赤霉素2-氧化酶1 Arabidopsis thaliana gibberellin 2-oxidase 1 1936.8 795.7