陆地棉扩展蛋白基因的鉴定与特征分析

张奇艳,雷忠萍,宋银,海江波,贺道华

Identification and Characterization of the Expansin Gene Family in Upland Cotton (Gossypium hirsutum)

QiYan ZHANG,ZhongPing LEI,Yin SONG,JiangBo HAI,DaoHua HE

表4 陆地棉扩展蛋白基因密码子的相对使用频率

Table 4 Relative Frequency of Synonymous Codon (RFSC) value of Expansin genes in G. hirsutum

aa Cod Freq aa Cod Freq aa Cod Freq aa Cod Freq F UUU 0.95 S UCU 1.35 Y UAU 1.06 C UGU 0.99 UUC 1.05 UCC 0.94 UAC 0.94 UGC 1.01 L UUA 0.77 UCA 1.06 * UAA 1.13 * UGA 0.75 UUG 1.54 UCG 0.49 UAG 1.13 W UGG 1 CUU 1.22 P CCU 1.69 H CAU 1.26 R CGU 0.54 CUC 1.05 CCC 0.73 CAC 0.74 CGC 0.5 CUA 0.64 CCA 1.24 Q CAA 1.2 CGA 0.63 CUG 0.78 CCG 0.34 CAG 0.8 CGG 0.29 I AUU 1.3 T ACU 1.28 N AAU 1.02 S AGU 0.86 AUC 1.05 ACC 1.14 AAC 0.98 AGC 1.31 AUA 0.64 ACA 1.33 K AAA 1.11 R AGA 1.8 M AUG 1 ACG 0.26 AAG 0.89 AGG 2.24 V GUU 1.42 A GCU 1.6 D GAU 1.18 G GGU 1.23 GUC 0.8 GCC 0.91 GAC 0.82 GGC 0.84 GUA 0.62 GCA 1.19 E GAA 1.18 GGA 1.2 GUG 1.16 GCG 0.3 GAG 0.82 GGG 0.73