基于小RNA深度测序技术鉴定侵染广东辣椒的病毒种类
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汤亚飞,裴凡,李正刚,佘小漫,于琳,蓝国兵,邓铭光,何自福
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Identification of Viruses Infecting Peppers in Guangdong by Small RNA Deep Sequencing
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YaFei TANG,Fan PEI,ZhengGang LI,XiaoMan SHE,Lin YU,GuoBing LAN,MingGuang DENG,ZiFu HE
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表5 125份病样RT-PCR检测结果
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Table 5 The viruses in 125 samples detected by RT-PCR
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病毒
Virus | 检出率Detection rate (%) | 湛江
Zhanjiang | 茂名
Maoming | 江门
Jiangmen | 佛山
Foshan | 广州
Guangzhou | 惠州
Huizhou | 韶关
Shaoguan | 梅州
Meizhou | 合计
Total | | PMMoV | 73.5 | 0 | 66.7 | 100.0 | 31.8 | 55.6 | 12.5 | 100.0 | 44.0 | | BPEV | 32.4 | 59.3 | 0 | 0 | 40.9 | 0 | 6.3 | 40.0 | 32.8 | | TMGMV | 44.1 | 29.6 | 0 | 0 | 0 | 44.4 | 75.0 | 0 | 31.2 | | ChiVMV | 17.6 | 22.2 | 66.7 | 50.0 | 54.5 | 44.4 | 0 | 50.0 | 29.6 | | PeVYV-1 | 5.9 | 44.4 | 0 | 0 | 40.9 | 0 | 37.5 | 40.0 | 26.4 | | PVMV | 2.9 | 7.4 | 33.3 | 25.0 | 45.5 | 77.8 | 12.5 | 70.0 | 25.6 | | CMV | 0 | 48.1 | 66.7 | 0 | 0 | 22.2 | 37.5 | 0 | 18.4 | | ChiRSV | 8.8 | 33.3 | 0 | 0 | 4.1 | 0 | 0 | 0 | 16.8 | | PeVYV-6 | 2.9 | 29.6 | 0 | 0 | 27.3 | 0 | 25.0 | 20.0 | 16.8 | | PVY | 8.8 | 7.4 | 33.3 | 0 | 22.7 | 66.7 | 6.3 | 10.0 | 15.2 | | CaCV | 8.8 | 11.1 | 0 | 75.0 | 0 | 0 | 31.2 | 40.0 | 14.4 | | BBWV-2 | 0 | 40.7 | 0 | 25.0 | 0 | 0 | 0 | 0 | 9.6 | | PCV1 | 0 | 3.7 | 33.3 | 0 | 4.5 | 0 | 50.0 | 0 | 8.8 | | TMV | 0 | 0 | 0 | 0 | 0 | 0 | 31.3 | 0 | 4.0 |
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