基于小RNA深度测序技术鉴定侵染广东辣椒的病毒种类
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汤亚飞,裴凡,李正刚,佘小漫,于琳,蓝国兵,邓铭光,何自福
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Identification of Viruses Infecting Peppers in Guangdong by Small RNA Deep Sequencing
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YaFei TANG,Fan PEI,ZhengGang LI,XiaoMan SHE,Lin YU,GuoBing LAN,MingGuang DENG,ZiFu HE
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表2 小RNA深度测序分析广东辣椒样品中病毒的结果
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Table 2 The viruses derived from small RNA deep sequencing of pepper samples collected from Guangdong
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病毒
Virus | 拼接得到与病毒有同源性的contings（条）Numbers of assembled contings | 茂名-1
Maoming-1 | 茂名-2
Maogming-2 | 茂名-3
Maoming-3 | 茂名-4
Maoming-4 | 梅州
Meizhou | 韶关-1
Shaoguan-1 | 韶关-2
Shaoguan-2 | | ChiRSV | 5 | 9 | 10 | - | - | - | - | | BBWV-2 | 7 | 2 | 5 | - | - | - | - | | BPEV | 12 | 11 | 5 | - | 21 | - | - | | CMV | 5 | 6 | 16 | 5 | - | - | - | | PeVYV-1 | 6 | 5 | 2 | - | - | - | - | | ChiVMV | 9 | 6 | 19 | - | - | - | - | | PVMV | 18 | 7 | - | - | 5 | - | - | | PeVYV-6 | 2 | 3 | 2 | - | - | - | - | | CaCV | - | - | 15 | - | 16 | 23 | 80 | | TMGMV | - | - | - | 2 | - | - | - | | PCV1 | - | - | - | 2 | - | 3 | - | | PMMoV | - | - | - | - | 3 | - | 2 | | PVY | - | - | - | - | 3 | - | - |
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