基于比较基因组学分析的方法定位及注释双峰驼MHC基因

支立康, 额尔敦木图, 安希文, 王超, 王瑞, 包花尔, 王秀珍

Mapping and Annotating of Bactrian Camel MHC Gene by Using the Comparative Genomic Approach

LiKang ZHI, Erdemtu, XiWen AN, Chao WANG, Rui WANG, Huar BAO, XiuZhen WANG

表1 双峰驼、人类、牛基因序列及数据来源

Table 1 Gene sequences and data sources of Bactrian camel, human, bovine

名称 Name 来源 Source 网址 URL 家养双峰驼参考基因组 Reference genome of domestic Bactrian camels NCBI ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/767/855/GCF_000767855.1_Ca_bactrianus_MBC_1.0/GCF_000767855.1_Ca_bactrianus_MBC_1.0_genomic.fna.gz 人类HLA编码序列 Human HLA coding sequence ensemble ftp://ftp.ensembl.org/pub/release-90/fasta/homo_sapiens/cdna/ 人类HLA全基因组序列 Human HLA whole genome sequence ensemble ftp://ftp.ensembl.org/pub/release-90/fasta/homo_sapiens/dna/ 人类HLA注释文件 Human HLA annotation file ensemble ftp://ftp.ensembl.org/pub/release-90/gtf/homo_sapiens 牛BoLA编码序列 Cattle BoLA coding sequence ensemble ftp://ftp.ensembl.org/pub/release-90/fasta/bos_taurus/cdna/ 牛BoLA全基因组序列 Cattle BoLA whole genome sequence ensemble ftp://ftp.ensembl.org/pub/release-90/fasta/bos_taurus/dna/ 牛BoLA注释文件 Cattle BoLA annotation file ensemble ftp://ftp.ensembl.org/pub/release-90/gtf/bos_taurus