苹果OFP基因家族的全基因组鉴定与非生物逆境表达分析
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许瑞瑞, 李睿, 王小非, 郝玉金
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Identification and Expression Analysis Under Abiotic Stresses of OFP Gene Family in Apple
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RuiRui XU, Rui LI, XiaoFei WANG, YuJin HAO
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| 表2 苹果OFP基因家族信息 |
| Table 2 The Ovate proteins gene family in apple |
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| 基因名称Gene name | 基因ID号
Gene Identifier | 染色体定位
Chromosome location | 编码序列长度
CDS length
(bp) | 外显子
数目
Exon no. | 大小
Size
(aa) | 分子量Molecular weight (Da) | 等电点Isoelectric Point | 拟南芥同源基因
Best homologs in Arabidopsis | | MdOFP01 | MDP0000243940 | chr2:4251394..4252275 | 882 | 1 | 293 | 33533.3 | 9.13 | AT5G66270.1 | | MdOFP02 | MDP0000155311 | chr2:13187873..13188835 | 963 | 1 | 320 | 25246.9 | 9.10 | AT1G19860.1 | | MdOFP03 | MDP0000684645 | chr3:4952419..4953570 | 1152 | 1 | 383 | 41697.8 | 8.99 | AT1G19860.1 | | MdOFP04 | MDP0000141642 | chr3:16219260..16220244 | 675 | 2 | 224 | 25723.6 | 9.51 | AT1G19860.1 | | MdOFP05 | MDP0000733399 | chr3:31034178..31034924 | 747 | 1 | 248 | 79142.9 | 5.58 | AT2G02160.1 | | MdOFP06 | MDP0000134728 | chr4:17309604..17310695 | 1092 | 1 | 363 | 72112.4 | 6.00 | AT5G12440.3 | | MdOFP07 | MDP0000147045 | chr4:17310063..17310721 | 627 | 2 | 208 | 26669.0 | 8.73 | AT3G12130.1 | | MdOFP08 | MDP0000158931 | chr5:941980..942486 | 507 | 1 | 168 | 51797.0 | 8.27 | AT5G18550.1 | | MdOFP09 | MDP0000241313 | chr5:5755844..5757320 | 1296 | 2 | 431 | 30624.6 | 9.44 | AT3G12130.1 | | MdOFP10 | MDP0000402356 | chr7:5438947..5439702 | 756 | 1 | 251 | 40999.8 | 8.81 | AT3G08505 | | MdOFP11 | MDP0000296199 | chr8:3579420..3580445 | 1026 | 1 | 341 | 47229.3 | 7.10 | AT2G41900.1 | | MdOFP12 | MDP0000155705 | chr10:26964000..26965493 | 1296 | 2 | 431 | 79656.8 | 6.14 | AT3G51950 | | MdOFP13 | MDP0000909475 | chr10:32149450..32149956 | 507 | 1 | 168 | 16845.6 | 8.27 | AT5G26749.1 | | MdOFP14 | MDP0000156202 | chr11:4775252..4776394 | 1143 | 1 | 380 | 91640.3 | 7.22 | AT1G10320.1 | | MdOFP15 | MDP0000311969 | chr11:22625025..22626007 | 549 | 2 | 182 | 75934.3 | 6.24 | AT1G30460.1 | | MdOFP16 | MDP0000127146 | chr11:32348926..32350337 | 912 | 2 | 303 | 73772.2 | 6.10 | AT1G30460.1 | | MdOFP17 | MDP0000669940 | chr12:3242911..3248219 | 957 | 3 | 318 | 20954.5 | 6.24 | AT3G48440.1 | | MdOFP18 | MDP0000137053 | chr12:3317131..3317688 | 558 | 1 | 185 | 65503.5 | 9.21 | AT1G19860.1 | | MdOFP19 | MDP0000456557 | chr12:14175298..14181532 | 1317 | 3 | 438 | 98062.9 | 5.78 | AT3G51120.1 | | MdOFP20 | MDP0000692068 | chr12:21920389..21922396 | 1098 | 2 | 365 | 20469.1 | 9.34 | AT1G66810.1 | | MdOFP21 | MDP0000238712 | chr12:21920806..21921922 | 1065 | 2 | 354 | 93378.1 | 8.34 | AT3G27700 | | MdOFP22 | MDP0000332435 | chr12:25821429..25822584 | 1161 | 1 | 386 | 77290.9 | 6.31 | AT2G33835.1 | | MdOFP23 | MDP0000410437 | chr13:18948503..18949252 | 750 | 1 | 249 | 76306.6 | 6.34 | AT2G41900.1 | | MdOFP24 | MDP0000943578 | chr13:25670394..25671158 | 765 | 1 | 254 | 57322.6 | 5.28 | AT1G01350.1 | | MdOFP25 | MDP0000243386 | chr14:4693458..4695714 | 1020 | 2 | 339 | 22465.2 | 6.99 | AT3G19360.1 | | MdOFP26 | MDP0000140421 | chr15:11737514..11738332 | 822 | 1 | 273 | 44526 | 9.32 | AT3G47120.1 | | MdOFP27 | MDP0000259366 | chr17:16535235..16536098 | 864 | 1 | 287 | 76587.0 | 5.93 | AT2G02160.1 | | MdOFP28 | MDP0000921224 | chr0:61416319..61416894 | 576 | 1 | 191 | 172448.5 | 8.12 | AT1G21580.1 |
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