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1.
Sequencing and Phylogenetic Analysis of Potato virus Y Liaoning Isolate in China
WANG Fang, GAO Zheng-liang, AN Meng-nan, ZHOU Ben-guo , WU Yuan-hua
Journal of Integrative Agriculture
2013, 12 (7):
1195-1200.
DOI: 10.1016/S2095-3119(13)60442-6
Complete genome sequence of Potato virus Y Liaoning isolate (PVY-LN) causing tobacco vein necrosis symptoms were isolated from Liaoning Province in China. Genome sequences of PVY-LN was 9 714 nucleotides in length, excluding the 3´- terminal poly (A) tail. PVY-LN encodes a single long open reading frame (ORF) of polyprotein that is predicted to be cleaved into ten mature proteins by three viral proteases. No recombination can be predicted in PVY-LN sequences compared with that of the other PVY strains using Recombination Detection Programe v. 4.16 (RDP4). Complete genome sequence comparison and phylogenetic analysis indicated that PVY-LN is closely related to PVY necrosis strain (PVYN).
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