Arends D, Prins P, Jansen R, Broman K. 2010. R/qtl: High-throughput multiple QTL mapping. Bioinformatics, 26, 2990–2992.
Argillier O, Barrière Y, Hébert Y. 1995. Genetic variation and selection criterion for digestibility traits of forage maize. Euphytica, 82, 175–184.
Barrière Y. 2017. Brown-midrib genes in maize and their efficiency in dairy cow feeding. Perspectives for breeding improved silage maize targeting gene modifications in the monolignol and p-hydroxycinnamate pathways. Maydica, 62, M21.
Barrière Y, Gibelin C, Argillier O, Méchin V. 2001. Genetic analysis in recombinant inbred lines of early dent forage maize. I: QTL mapping for yield, earliness, starch and crude protein contents from per se value and top cross experiments. Maydica, 46, 253–266.
Barrière Y, Guillet C, Goffner D, Pichon M. 2003. Genetic variation and breeding strategies for improved cell wall digestibility in annual forage crops. A review. Animal Research, 52, 193–228.
Barrière Y, Méchin V, Denoue D, Bauland C, Laborde J. 2010. QTL for yield, earliness, and cell wall quality traits in topcross experiments of the F838×F286 early maize RIL progeny. Crop Science, 50, 1761–1772.
Barrière Y, Ralph J, Méchin V, Guillaumie S, Grabber J H, Argillier O, Chabbert B, Lapierre C. 2004. Genetic and molecular basis of grass cell wall biosynthesis and degradability. II. Lessons from brown-midrib mutants. Comptes Rendus Biologies, 327, 847–860.
Barrière Y, Riboulet C, Méchin V, Maltese S, Pichon M, Cardinal A, Lapierre C, Lubberstedt T, Martinant J P. 2007. Genetics and genomics of lignification in grass cell walls based on maize as model species. Genes Genomes Genomics, 1, 133–156.
Barrière Y, Thomas J, Denoue D. 2008. QTL mapping for lignin content, lignin monomeric composition, p-hydroxycinnamate content, and cell wall digestibility in the maize recombinant inbred line progeny F838×F286. Plant Science, 175, 585–595.
Bohn M, Schulz B, Kreps R, Klein D, Melchinger A E. 2000. QTL mapping for resistance against the European corn borer (Ostrinia nubilalis H.) in early maturing European dent germplasm. Theoretical and Applied Genetics, 101, 907–917.
Cardinal A J, Lee M, Moore K J. 2003. Genetic mapping and analysis of quantitative trait loci affecting fiber and lignin content in maize. Theoretical and Applied Genetics, 106, 866–874.
Chen W, VanOpdorp N, Fitzl D, Tewari J, Friedemann P, Greene T, Thompson S, Kumpatla S, Zheng P. 2012. Transposon insertion in a cinnamyl alcohol dehydrogenase gene is responsible for a brown midrib1 mutation in maize. Plant Molecular Biology, 80, 289–297.
Chen Y, Liu H, Ali F, Scott M P, Ji Q, Frei U K, Lübberstedt T. 2012. Genetic and physical fine mapping of the novel brown midrib gene bm6 in maize (Zea mays L.) to a 180 kb region on chromosome 2. Theoretical and Applied Genetics, 125, 1223–1235.
Churchill G A, Doerge R W. 1994. Empirical threshold values for quantitative trait mapping. Genetics, 138, 963–971.
Fontaine A, Briand M, Barrière Y. 2003. Genetic variation and QTL mapping of para-coumaric and ferulic acid. Maydica, 48, 75–84.
Halpin C, Holt K, Chojecki J, Oliver D, Chabbert B, Monties B, Edwards K, Barakate A, Foxon G A. 1998. Brown-midrib maize (bm1) - A mutation affecting the cinnamyl alcohol dehydrogenase gene. The Plant Journal, 14, 545–553.
Haney L J, Hake S, Scott M P. 2008. Allelism testing of maize coop stock center lines containing unknown brown midrib alleles. Maize Genetics Cooperative Newsletter, 82, 4–5.
Hoffmann L, Besseau S, Geoffroy P, Ritzenthaler C, Meyer D, Lapierre C, Pollet B, Legrand M. 2004. Silencing of hydroxycinnamoyl-coenzyme A shikimate/quinate hydroxycinnamoyltransferase affects phenylpropanoid biosynthesis. The Plant Cell, 16, 1446–1465.
Knapp S J, Stroup W W, Ross W M. 1985. Exact confidence intervals for heritability on a progeny mean basis. Crop Science, 25, 192–194.
Krakowsky M D, Lee M, Beeghly H H, Coors J G. 2003. Characterization of quantitative trait loci affecting fiber and lignin in maize (Zea mays L.). Maydica, 48, 283–292.
Krakowsky M D, Lee M, Coors J G. 2005. Quantitative trait loci for cell-wall components in recombinant inbred lines of maize (Zea mays L.) I: Stalk tissue. Theoretical and Applied Genetics, 111, 337–346.
Krakowsky M D, Lee M, Coors J G. 2006. Quantitative trait loci for cell wall components in recombinant inbred lines of maize (Zea mays L.) II: Leaf sheath tissue. Theoretical and Applied Genetics, 112, 717–726.
Li B, Gao F, Ren B Z, Dong S T, Liu P, Zhao B, Zhang J W. 2021. Lignin metabolism regulates lodging resistance of maize hybrids under varying planting density. Journal of Integrative Agriculture, 20, 2077–2089.
Li K, Wang H, Hu X, Ma F, Wu Y, Wang Q, Liu Z, Huang C. 2017. Genetic and quantitative trait locus analysis of cell wall components and forage digestibility in the Zheng58×HD568 maize RIL population at anthesis stage. Frontiers in Plant Science, 8, 1472.
Li L, Hill-Skinner S, Liu S, Beuchle D, Tang H M, Yeh C T, Nettleton D, Schnable P S. 2015. The maize brown midrib4 (bm4) gene encodes a functional folylpolyglutamate synthase. The Plant Journal, 81, 493–504.
Liu X, Hu X, Li K, Liu Z, Wu Y, Wang H, Huang C. 2020. Genetic mapping and genomic selection for maize stalk strength. BMC Plant Biology, 20, 196.
Lübberstedt T, Melchinger A E, Fähr S, Klein D, Dally A, Westhoff P. 1998. QTL mapping in testcrosses of flint lines of maize: III. Comparison across populations for forage traits. Crop Science, 38, 1278–1289.
Lübberstedt T, Melchinger A E, Klein D, Degenhardt H, Paul C. 1997a. QTL mapping in testcrosses of European flint lines of maize: II. Comparison of different testers for forage quality traits. Crop Science, 37, 1913–1922.
Lübberstedt T, Melchinger A E, Schön C C, Utz H F, Klein D. 1997b. QTL mapping in testcrosses of European flint lines of maize: I. Comparison of different testers for forage yield traits. Crop Science, 37, 921–931.
Méchin V, Argillier O, Hébert Y, Guingo E, Moreau L, Charcosset A, Barrière Y. 2001. Genetic analysis and QTL mapping of cell wall digestibility and lignification in silage maize. Crop Science, 41, 690–697.
Méchin V, Argillier O, Menanteau V, Barrière Y, Mila I, Pollet B, Lapierre C. 2000. Relationship of cell wall composition to in vitro cell wall digestibility of maize inbred line stems. Journal of the Science of Food & Agriculture, 80, 574–580.
Murray M G, Thompson W F. 1980. Rapid isolation of high molecular weight plant DNA. Nucleic Acids Research, 8, 4321–4325.
Papst C, Melchinger A E, Eder J, Schulz B, Klein D, Bohn M. 2001. QTL mapping for resistance to European corn borer (Ostrinia nubilalis HB.) in early maturing European dent maize (Zea mays L.) germplasm and comparison of genomic regions for resistance across two populations of F3 families. Maydica, 46, 195–205.
Purcell S, Neale B, Toddbrown K, Thomas L, Ferreira M A R, Bender D, Maller J, Sklar P, Bakker P I W D, Daly M J. 2007. PLINK: A tool set for whole-genome association and population-based linkage analyses. American Journal of Human Genetics, 81, 559–575.
Riboulet C, Fabre F, Dénoue D, Martinant J P, Lefevre B, Barrière Y. 2008. QTL mapping and candidate gene research from lignin content and cell wall digestibility in a top-cross of a flint maize recombinant inbred line progeny harvested at silage stage. Maydica, 53, 1–9.
Roussel V, Gibelin C, Fontaine A S, Barrière Y. 2002. Genetic analysis in recombinant inbred lines of early dent forage maize. II. QTL mapping for cell wall constituents and cell wall digestibility from per se value and top cross experiments. Maydica, 47, 9–20.
Scholey D V, Burton E J, Williams P E V. 2016. The bio refinery; producing feed and fuel from grain. Food Chemistry, 197, 937–942.
Tang H M, Liu S, Hill-Skinner S, Wu W, Reed D, Yeh C T, Nettleton D, Schnable P S. 2014. The maize brown midrib2 (bm2) gene encodes a methylenetetrahydrofolate reductase that contributes to lignin accumulation. The Plant Journal, 77, 380–392.
Taylor J, Butler D. 2017. R package ASMap: Efficient genetic linkage map construction and diagnosis. Journal of Statistical Software, 79, 1–28.
Truntzler M, Barrière Y, Sawkins M C, Lespinasse D, Betran J, Charcosset A, Moreau L. 2010. Meta-analysis of QTL involved in silage quality of maize and comparison with the position of candidate genes. Theoretical and Applied Genetics, 121, 1465–1482.
Vermerris W, Mcintyre L M. 2010. Time to flowering in brown midrib mutants of maize: An alternative approach to the analysis of developmental traits. Heredity, 83, 171–178.
Vignols F, Rigau J, Torres M A, Capellades M, Puigdomènech P. 1995. The brown midrib3 (bm3) mutation in maize occurs in the gene encoding caffeic acid O-methyltransferase. The Plant Cell, 7, 407–416.
Wu Z, Wang N, Hisano H, Cao Y, Wu F, Liu W, Bao Y, Wang Z Y, Fu C. 2019. Simultaneous regulation of F5H in COMT-RNAi transgenic switchgrass alters effects of COMT suppression on syringyl lignin biosynthesis. Plant Biotechnology Journal, 17, 836–845.
Xiong W, Wu Z, Liu Y, Li Y, Su K, Bai Z, Guo S, Hu Z, Zhang Z, Bao Y, Sun J, Yang G, Fu C. 2019. Mutation of 4-coumarate: coenzyme A ligase 1 gene affects lignin biosynthesis and increases the cell wall digestibility in maize brown midrib5 mutants. Biotechnology for Biofuels, 12, 82–94.
Xu C, Ren Y, Jian Y, Guo Z, Zhang Y, Xie C, Fu J, Wang H, Wang G, Xu Y. 2017. Development of a maize 55 K SNP array with improved genome coverage for molecular breeding. Molecular Breeding, 37, 1–12.
Yan J, Yang X, Shah T, Sánchez-Villeda H, Li J, Warburton M, Yi Z, Crouch J H, Xu Y. 2010. High-throughput SNP genotyping with the GoldenGate assay in maize. Molecular Breeding, 25, 441–451.
Zhong R, Cui D, Ye Z H. 2018. Secondary cell wall biosynthesis. New Phytologist, 221, 1703–1723.
Zhu J. 1996. Analysis of conditional genetic effects and variance components in developmental genetics. Genetics, 141, 1633–1639.
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