Scientia Agricultura Sinica ›› 2019, Vol. 52 ›› Issue (5): 777-785.doi: 10.3864/j.issn.0578-1752.2019.05.001
• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles Next Articles
ZHOU JiaQin1,ZHU JunZhao2,YANG SiXue2,ZHU ZhouJie2,YAO Jie2,ZHENG WenJuan2,ZHU ShiHua2,DING WoNa2()
[1] |
GIEHL R F, GRUBER B D, VON W N .It's time to make changes: modulation of root system architecture by nutrient signals. Journal of Experimental Botany, 2014,65(3):769-778.
doi: 10.1093/jxb/ert421 pmid: 24353245 |
[2] |
MEISTER R, RAJANI M S, RUZICKA D, SCHACHTMAN D P .Challenges of modifying root traits in crops for agriculture. Trends in Plant Science, 2014,19(12):779-788.
doi: 10.1016/j.tplants.2014.08.005 pmid: 25239776 |
[3] |
VILLORDON A Q, GINZBERG I, FIRON N .Root architecture and root and tuber crop productivity. Trends in Plant Science, 2014,19(7):419-425.
doi: 10.1016/j.tplants.2014.02.002 pmid: 24630073 |
[4] | 石庆华, 黄英金, 李木英, 徐益群, 谭雪明, 张佩莲 .水稻根系性状与地上部的相关及根系性状的遗传研究. 中国农业科学, 1997,30(4):62-68. |
SHI Q H, HUANG Y J, LI M Y, XU Y Q, TAN X M, ZHAGN P L . Studies on the heredity of root characteristics and correlation between the characteristics of roots and upperground parts in rice. Scientia Agricultura Sinica , 1997,30(4):62-68. (in Chinese) | |
[5] | 洛育 .黑龙江省水稻根系性状与地上部性状的关系. 中国农学通报, 2010,26(14):165-168. |
LUO Y . Dependence relation of aerial part traits and root traits of rice in Heilongjiang province. Chinese Agricultural Science Bulletin , 2010,26(14):165-168. (in Chinese) | |
[6] |
ROGERS E D, BENFEY P N .Regulation of plant root system architecture: implications for crop advancement. Current Opinion in Biotechnology, 2015,32(32C):93-98.
doi: 10.1016/j.copbio.2014.11.015 pmid: 25448235 |
[7] |
REBOUILLAT J, DIEVART A, VERDEIL J L, ESCOUTE J, GIESE G, BREITLER J C, GANTET P, ESPEOUT S, GUIDERDONI E PÉRIN C,. Molecular genetics of rice root development. Rice, 2009,2(1):15-34.
doi: 10.1007/s12284-008-9016-5 |
[8] |
E Z-G GE L,WANG L,. Molecular mechanism of adventitious root formation in rice. Plant Growth Regulation, 2012,68(3):325-331.
doi: 10.1007/s10725-012-9721-3 |
[9] |
YU P, GUTJAHR C, LI C, HOCHHOLDINGER F .Genetic control of lateral root formation in cereals. Trends in Plant Science, 2016,21(1):951-961.
doi: 10.1016/j.tplants.2016.07.011 pmid: 27524642 |
[10] |
CHEN Z C, YAMAJI N, KASHINO-FUJII M, MA J F .A cation-chloride cotransporter gene is required for cell elongation and osmoregulation in rice. Plant Physiology, 2016,171(1):494-507.
doi: 10.1104/pp.16.00017 pmid: 26983995 |
[11] |
DING W, LIN L, ZHANG B, XIANG X, WU J, PAN Z, ZHU S .OsKASI, a β-ketoacyl-[acyl carrier protein] synthase I, is involved in root development in rice (Oryza sativa L.). Planta , 2015,242(1):203-213.
doi: 10.1007/s00425-015-2296-2 pmid: 25893869 |
[12] |
JIA L, WU Z, HAO X, CARRIE C, ZHENG L, WHELAN J, WU Y, WANG S, WU P, MAO C .Identification of a novel mitochondrial protein, short postembryonic roots 1 (SPR1), involved in root development and iron homeostasis in Oryza sativa . New Phytologist , 2011,189(3):843-855.
doi: 10.1111/j.1469-8137.2010.03513.x pmid: 21039568 |
[13] |
JIA L, ZHANG B, MAO C, LI J, WU Y, WU P, WU Z .OsCYT-INV1 for alkaline/neutral invertase is involved in root cell development and reproductivity in rice (Oryza sativa L.). Planta , 2008,228(1):51-59.
doi: 10.1007/s00425-008-0718-0 pmid: 18317796 |
[14] |
ZHAO Y, HU Y F, DAI M Q, HUANG L M, ZHOU D X .The WUSCHEL-related homeobox gene WOX11 is required to activate shoot-borne crown root development in rice. The Plant Cell, 2009,21(3):736-748.
doi: 10.1105/tpc.108.061655 pmid: 19258439 |
[15] |
DING W, TONG H, ZHENG W, YE J, PAN Z, ZHANG B, ZHU S .Isolation, characterization and transcriptome analysis of a cytokinin receptor mutant osckt1 in rice. Frontiers in Plant Science , 2017,8:88.
doi: 10.3389/fpls.2017.00088 pmid: 5281565 |
[16] |
丁沃娜, 童艳丽, 吴晶, 朱世华 .一个水稻短根毛突变体的鉴定和基因定位. 中国农业科学, 2011,44(21):4333-4339.
doi: 10.3864/j.issn.0578-1752.2011.21.001 |
DING W N, TONG Y L, WU J, ZHU S H . Identification and gene mapping of a novel short root hair mutant in rice. Scientia Agricultura Sinica , 2011,44(21):4333-4339. (in Chinese)
doi: 10.3864/j.issn.0578-1752.2011.21.001 |
|
[17] |
CHEN S, JIN W, WANG M, ZHANG F, ZHOU J, JIA Q, WU Y, LIU F, WU P .Distribution and characterization of over 1000 T-DNA tags in rice genome. The Plant Journal, 2003,36(1):105-113.
doi: 10.1046/j.1365-313X.2003.01860.x pmid: 12974815 |
[18] |
MICHELMORE R W, PAPAN I, KESSELI R V .Identification of markers linked to disease-resistance genes by bulked segregant analysis: A rapid method to detect markers in specific genomic regions by using segregating populations. Proceedings of the National Academy of Sciences of the USA, 1991,88(21):9828-9832.
doi: 10.1073/pnas.88.21.9828 |
[19] |
QIN C, CHENG L, ZHANG H, HE M, SHEN J, ZHANG Y, WU P .OsGatB, the subunit of tRNA-dependent amidotransferase, is required for primary root development in rice. Frontiers in Plant Science, 2016,7:599.
doi: 10.3389/fpls.2016.00599 |
[20] |
VENDITTI R, WILSON C DE MATTEIS M A,. Exiting the ER: What we know and what we don’t. Trends in Cell Biology, 2014,24(1):9-18.
doi: 10.1016/j.tcb.2013.08.005 pmid: 24076263 |
[21] |
MILLER E A, BARLOWE C .Regulation of coat assembly-sorting things out at the ER. Current Opinion in Cell Biology, 2010,22(4):447-453.
doi: 10.1016/j.ceb.2010.04.003 pmid: 20439155 |
[22] |
BI X, CORPINA R A, GOLDBERG J .Structure of the Sec23/24-Sar1 pre-budding complex of the COPII vesicle coat. Nature, 2002,419(6904):271-277.
doi: 10.1038/nature01040 pmid: 12239560 |
[23] |
ROBINSON D G, HERRANZ M C, BUBECK J, PEPPERKOK R, RITZENTHALER C .Membrane dynamics in the early secretory pathway. Critical Reviews in Plant Sciences, 2007,26(4):199-225.
doi: 10.1080/07352680701495820 |
[24] |
SCHWARZ K, IOLASCON A, VERISSIMO F, TREDE N S, HORSLEY W, CHEN W, PAW B H, HOPFNER K P, HOLZMANN K, RUSSO R, ESPOSITO M R, SPANO D, DE FALCO L, HEINRICH K, JOGGERST B, ROJEWSKI M T, PERROTTA S, DENECKE J, PANNICKE U, DELAUNAY J, PEPPERKOK R, HEIMPEL H .Mutations affecting the secretory COPII coat component SEC23B cause congenital dyserythropoietic anemia type II. Nature Genetics, 2009,41(8):936-940.
doi: 10.1038/ng.405 pmid: 19561605 |
[25] |
ABOULELA M, NAKAGAWA T, OHSHIMA A, NISHIMURA K, TANAKA Y .The Arabidopsis COPII components, AtSEC23A and AtSEC23D, are essential for pollen wall development and exine patterning. Journal of Experimental Botany, 2018,69(7):1615-1633.
doi: 10.1093/jxb/ery015 pmid: 29390074 |
[26] |
FROMME J C, ORCI L, SCHEKMAN R .Coordination of COPII vesicle trafficking by Sec23. Trends in Cell Biology, 2008,18(7):330-336.
doi: 10.1016/j.tcb.2008.04.006 pmid: 18534853 |
[27] |
KUEHN M J, HERRMANN J M, SCHEKMAN R .COPII-cargo interactions direct protein sorting into ER-derived transport vesicles. Nature, 1998,391(6663):187-190.
doi: 10.1038/34438 pmid: 9428766 |
[28] |
MANCIAS J D, GOLDBERG J .The transport signal on Sec22 for packaging into COPII-coated vesicles is a conformational epitope. Molecular Cell, 2007,26(3):403-414.
doi: 10.1016/j.molcel.2007.03.017 pmid: 17499046 |
[29] |
BOYADJIEV S A, FROMME J C, BEN J, CHONG S S, NAUTA C, HUR D J, ZHANG G, HAMAMOTO S, SCHEKMAN R, RAVAZZOLA M, ORCI L, EYAID W .Cranio-lenticulosutural dysplasia is caused by a SEC23A mutation leading to abnormal endoplasmic-reticulum-to-Golgi trafficking. Nature Genetics, 2006,38(10):1192-1197.
doi: 10.1088/0031-9155/53/6/010 pmid: 16980979 |
[30] |
FROMME J C, RAVAZZOLA M, HAMAMOTO S, AL-BALWI M, EYAID W, BOYADJIEV S A, COSSON P, SCHEKMAN R, ORCI L .The genetic basis of a craniofacial disease provides insight into COPII coat assembly. Developmental Cell, 2007,13(5):623-634.
doi: 10.1016/j.devcel.2007.10.005 pmid: 2262049 |
[31] |
LANG M R, LAPIERRE L A, FROTSCHER M, GOLDENRING J R, KNAPIK E W .Secretory COPII coat component Sec23a is essential for craniofacial chondrocyte maturation. Nature Genetics, 2006,38(10):1198-1203
doi: 10.1038/ng1880 pmid: 16980978 |
[32] |
ZENG Y, CHUNG K P, LI B, LAI C M, LAM S K, WANG X, CUI Y, GAO C, LUO M, WONG K B, SCHEKMAN R, JIANG L .Unique COPII component AtSar1a/AtSec23a pair is required for the distinct function of protein ER export in Arabidopsis thaliana . Proceedings of the National Academy of Sciences of the USA , 2015,112(46):14360-14365.
doi: 10.1073/pnas.1519333112 pmid: 26578783 |
[33] |
TANAKA Y, NISHIMURA K, KAWAMUKAI M, OSHIMA A, NAKAGAWA T .Redundant function of two Arabidopsis COPII components, AtSec24B and AtSec24C, is essential for male and female gametogenesis. Planta , 2013,238(3):561-575.
doi: 10.1007/s00425-013-1913-1 pmid: 23779001 |
[34] |
CONGER R, CHEN Y, FORNACIARI S, FASO C, HELD MA, RENNA L, BRANDIZZI F .Evidence for the involvement of theArabidopsis SEC24A in male transmission. Journal of Experimental Botany , 2011,62(14):4917-4926.
doi: 10.1093/jxb/err174 pmid: 21705385 |
[35] |
NAKANO R T, MATSUSHIMA R, UEDA H, TAMURA K, SHIMADA T, LI L, HAYASHI Y, KONDO M, NISHIMURA M, HARA-NISHIMURA I .GNOMLIKE1/ERMO1 and SEC24a/ ERMO2 are required for maintenance of endoplasmic reticulum morphology in Arabidopsis thaliana . The Plant Cell , 2009,21(11):3672-3685.
doi: 10.1105/tpc.109.068270 pmid: 19933201 |
[36] |
QU X, CHATTY P R, ROEDER A H .Endomembrane trafficking protein SEC24A regulates cell size patterning in Arabidopsis . Plant Physiology , 2014,166(4):1877-1890.
doi: 10.1104/pp.114.246033 pmid: 25315606 |
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